FFCP PHASE1:Mm9::chr4:44085404..44085429,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=50798|HGNC=|MCL_coexpression_id=8|UniProt=G3UWV5|association_with_transcript=44bp_to_ENSMUST00000173383_5end|description=CAGE_peak_5_at_Gne_5end|id=chr4:44085404..44085429,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000223,1.51e-09,20;CL:0000066,1.04e-08,25;CL:0002563,3.58e-08,9;CL:0002251,3.58e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.71e-08!15;UBERON:0001242!6.45e-07!13;UBERON:0000060!6.45e-07!13;UBERON:0001262!6.45e-07!13;UBERON:0004786!6.45e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.25e-12,15;UBERON:0000160,2.53e-11,31;UBERON:0001242,5.21e-11,13;UBERON:0001262,5.21e-11,13;UBERON:0004786,5.21e-11,13;UBERON:0001007,6.73e-11,116;UBERON:0001555,6.73e-11,116;UBERON:0007026,6.73e-11,116;UBERON:0004119,1.80e-10,118;UBERON:0000925,1.80e-10,118;UBERON:0006595,1.80e-10,118;UBERON:0004921,7.56e-10,114;UBERON:0005409,2.31e-09,47;UBERON:0009854,1.60e-08,23;UBERON:0009856,1.60e-08,23;UBERON:0003350,3.58e-08,9;UBERON:0004808,3.58e-08,9;UBERON:0001277,3.58e-08,9;UBERON:0002107,1.18e-07,22;UBERON:0007499,1.18e-07,22;UBERON:0006925,1.18e-07,22;UBERON:0009497,1.18e-07,22;UBERON:0000015,1.18e-07,22;UBERON:0002423,1.18e-07,22;UBERON:0006235,1.18e-07,22;UBERON:0008835,1.18e-07,22;UBERON:0003894,1.18e-07,22;UBERON:0004161,1.18e-07,22;UBERON:0008836,1.18e-07,22;UBERON:0002365,1.88e-07,25;UBERON:0002330,1.88e-07,25|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,3.0246421130683,7.01254021924886,1.34303417529512,1.16806320297763,0,0.422366166455,0.70219357896598,0.34243593645101,0.478632953972018,0.171200729931206,0,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0,0,0.255129870453209,0.297872853602656,0.522399578277871,2.07990149631429,1.60586496747019,1.14846392823004,0.430761996159075,1.29282739611533,2.09025761402011,1.26015064879965,1.10865255327652,0.635030673459631,0,0,1.1554064790051,1.66234645358492,2.04169356262369,0,1.5626706890476,0,0,0,0.485510353031154,0.755380907853464,1.92616169317078,1.46837401729345,0,0.436050312760893,0.659058548203415,0.972149495371417,0,0,1.51004345451963,0.725362142011344,0.672187598284928,0.771778308107841,0.286533439938757,1.03134418455488,0,0,0,0,0,1.3498495759221,0,0.7104801149461,0,0.384218305321555,0,0,0,0.856952953211411,0.220868540951614,0.122490799214954,0,0.919218786610021,2.20231761998777,0.255374676170375,0.307213066512487,0,0.365950574409639,0.52091337055676,1.3959149950069,0.56276261003168,0.916789486660861,0.883885756421003,0.569486723196412,0,0.605809546665472,1.058001841495,0.579728977403356,7.74381489283248,12.2394840067395,16.7307989407723,16.2444104361917,32.7059627581055,5.47733238513832,0.340860645156116,0,0,0,0,0,0,0.865964164044856,1.52015919285059,1.51657333504435,6.96521666286266,1.03575153458869,0.593768556259299,0,0,0,0.150722640552623,0,0.628332956648377,0.247194967734374,2.16899035379867,1.76922110389975,3.39710384889559,1.98757366614354,0,3.72783522436244,0.292780797011547,0,2.81002760729451,0.359445373517761,0,1.27070227073065,0.449371918214468,0.457500602818626,0.125654352112864,0,0,0.20778804455956,0.811206315338788,0.101839363850316,2.23932547098167,0.758168275301024,1.47309299120532,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0.512454881139399,0.281105173679186,2.32833033665114,0.215567992932842,0,0,0,0,0.696504333044333,0.411564272815887,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.771335564436891,0.232533944750408,1.07309360559848,0.583826711835847,0.658239399653922,0.656669856316381,0.648550476366846,0.438599962275997,0.658650345873152,1.61047702512446,0.210289948564127,0.102904612379284,3.63460661282178,2.90895623329899,0,0,0.644337306610467,0.403367049246685,0,0.570676878337677,1.42358718463353,1.15289268306808,0.502670417600539,1.1937388322469,0.779856348476481,0.898819408654221,2.37751854862164,3.38540164532424,0,0.114248512609729,0,0,0,0.140271639780637,0.442655759869801,0.885660887877613,0.31399745568275,1.1105744752962,28.1629995732791,0,0,0,0.608580364165509,0,0,0.287696137450811,2.10775794807546,2.19649130550465,0,2.23284568601102,2.80833905803104,17.1753637004036,9.14926808961752,19.2977408545347,1.10851914099963,0.189491411770485,0,0.339490171550376,0.469380496577004,0.670025029767263,0,0.390267295715598,0.630540576424764,0.221464689648775,0.478364305972461,0.327726629431476,0,1.15719246865209,0,0,0.983528546038072,3.03530420935206,0,0.586058432961016,0.163934945376675,1.00988370881749,0.631016438832513,0.390438744296638,0.215423397732799,1.67278158566786,0.445597348164788,0.283076530788832,0.809621403349789,0.876767573733936,2.76701444562566,0,0.425820255624806,0,0,0.164970122972535,0,0,0,0,0.590603785761546,0.307435147943927,0.516856586336442,0,0,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0.913394847343798,0.938686832254841,0.847328283455281,1.98475558249466,1.31909002353184,0.968786560175433,0.603129249281559,0.477489376012546,0.492422699235184,2.33184669303881,0.927126510052548,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0.457556346413045,1.35982743995084,0.279902904647316,1.10559979043539,2.86401185404534,0,0.203319467126849,0.432021363287205,0.209088296014469,1.52853794622324,0.539457385539283,1.40510874733071,1.30877970992015,1.29614973291793,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0,0,0.234714477291508,0.2604087696879,0,0,0,0.632022241256357,1.21635129174099,0.924398614483445,0.649604114888975,0.179026695667481,0.39736270956253,0.240390899039938,0.443068581523732,0.100966449948148,0.15241361331,0.100826185136841,0.38983152295901,0.192423683280659,0.584384510907845,0.226730383615211,0,0.269141569828427,0.167884616364078,3.28422309854724,1.12609485270709,0.183151624267265,1.2862102744744,0,0,0.460325236507177,0.572895513439397,0,0,0,1.35004500046361,0,0,0,0.207574695168353,0,0,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,0.618105171716683,0.64183841918363,0,0.50695859978048,0,0.561849044819294,0.704276676453562,0.689225627467359,0.952587382566147,0.347652977834566,0.38581844092741,1.64834360321323,0.147198920134397,1.37147700954166,0.532427418478012,0.715308569841963,0.726732083161643,0.752875043322645,0.338458431566706,0.182927972872773,0.789209134313529,0.407412341537585,0,0.355905054372522,0.394017929502254,0.409231043169689,0.77468420592983,0.385813221962283,1.24905288968973,1.63752125911786,0.429742108096597,1.14772999241306,0.441182838239031,1.39120701372253|short_description=p5@Gne}} | ||
|EntrezGene=50798 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=G3UWV5 | |||
|association_with_transcript=44bp_to_ENSMUST00000173383_5end | |||
|description=CAGE_peak_5_at_Gne_5end | |||
|id=chr4:44085404..44085429,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.51e-09,20;CL:0000066,1.04e-08,25;CL:0002563,3.58e-08,9;CL:0002251,3.58e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.71e-08!15;UBERON:0001242!6.45e-07!13;UBERON:0000060!6.45e-07!13;UBERON:0001262!6.45e-07!13;UBERON:0004786!6.45e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.25e-12,15;UBERON:0000160,2.53e-11,31;UBERON:0001242,5.21e-11,13;UBERON:0001262,5.21e-11,13;UBERON:0004786,5.21e-11,13;UBERON:0001007,6.73e-11,116;UBERON:0001555,6.73e-11,116;UBERON:0007026,6.73e-11,116;UBERON:0004119,1.80e-10,118;UBERON:0000925,1.80e-10,118;UBERON:0006595,1.80e-10,118;UBERON:0004921,7.56e-10,114;UBERON:0005409,2.31e-09,47;UBERON:0009854,1.60e-08,23;UBERON:0009856,1.60e-08,23;UBERON:0003350,3.58e-08,9;UBERON:0004808,3.58e-08,9;UBERON:0001277,3.58e-08,9;UBERON:0002107,1.18e-07,22;UBERON:0007499,1.18e-07,22;UBERON:0006925,1.18e-07,22;UBERON:0009497,1.18e-07,22;UBERON:0000015,1.18e-07,22;UBERON:0002423,1.18e-07,22;UBERON:0006235,1.18e-07,22;UBERON:0008835,1.18e-07,22;UBERON:0003894,1.18e-07,22;UBERON:0004161,1.18e-07,22;UBERON:0008836,1.18e-07,22;UBERON:0002365,1.88e-07,25;UBERON:0002330,1.88e-07,25 | |||
|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,3.0246421130683,7.01254021924886,1.34303417529512,1.16806320297763,0,0.422366166455,0.70219357896598,0.34243593645101,0.478632953972018,0.171200729931206,0,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0,0,0.255129870453209,0.297872853602656,0.522399578277871,2.07990149631429,1.60586496747019,1.14846392823004,0.430761996159075,1.29282739611533,2.09025761402011,1.26015064879965,1.10865255327652,0.635030673459631,0,0,1.1554064790051,1.66234645358492,2.04169356262369,0,1.5626706890476,0,0,0,0.485510353031154,0.755380907853464,1.92616169317078,1.46837401729345,0,0.436050312760893,0.659058548203415,0.972149495371417,0,0,1.51004345451963,0.725362142011344,0.672187598284928,0.771778308107841,0.286533439938757,1.03134418455488,0,0,0,0,0,1.3498495759221,0,0.7104801149461,0,0.384218305321555,0,0,0,0.856952953211411,0.220868540951614,0.122490799214954,0,0.919218786610021,2.20231761998777,0.255374676170375,0.307213066512487,0,0.365950574409639,0.52091337055676,1.3959149950069,0.56276261003168,0.916789486660861,0.883885756421003,0.569486723196412,0,0.605809546665472,1.058001841495,0.579728977403356,7.74381489283248,12.2394840067395,16.7307989407723,16.2444104361917,32.7059627581055,5.47733238513832,0.340860645156116,0,0,0,0,0,0,0.865964164044856,1.52015919285059,1.51657333504435,6.96521666286266,1.03575153458869,0.593768556259299,0,0,0,0.150722640552623,0,0.628332956648377,0.247194967734374,2.16899035379867,1.76922110389975,3.39710384889559,1.98757366614354,0,3.72783522436244,0.292780797011547,0,2.81002760729451,0.359445373517761,0,1.27070227073065,0.449371918214468,0.457500602818626,0.125654352112864,0,0,0.20778804455956,0.811206315338788,0.101839363850316,2.23932547098167,0.758168275301024,1.47309299120532,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0.512454881139399,0.281105173679186,2.32833033665114,0.215567992932842,0,0,0,0,0.696504333044333,0.411564272815887,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.771335564436891,0.232533944750408,1.07309360559848,0.583826711835847,0.658239399653922,0.656669856316381,0.648550476366846,0.438599962275997,0.658650345873152,1.61047702512446,0.210289948564127,0.102904612379284,3.63460661282178,2.90895623329899,0,0,0.644337306610467,0.403367049246685,0,0.570676878337677,1.42358718463353,1.15289268306808,0.502670417600539,1.1937388322469,0.779856348476481,0.898819408654221,2.37751854862164,3.38540164532424,0,0.114248512609729,0,0,0,0.140271639780637,0.442655759869801,0.885660887877613,0.31399745568275,1.1105744752962,28.1629995732791,0,0,0,0.608580364165509,0,0,0.287696137450811,2.10775794807546,2.19649130550465,0,2.23284568601102,2.80833905803104,17.1753637004036,9.14926808961752,19.2977408545347,1.10851914099963,0.189491411770485,0,0.339490171550376,0.469380496577004,0.670025029767263,0,0.390267295715598,0.630540576424764,0.221464689648775,0.478364305972461,0.327726629431476,0,1.15719246865209,0,0,0.983528546038072,3.03530420935206,0,0.586058432961016,0.163934945376675,1.00988370881749,0.631016438832513,0.390438744296638,0.215423397732799,1.67278158566786,0.445597348164788,0.283076530788832,0.809621403349789,0.876767573733936,2.76701444562566,0,0.425820255624806,0,0,0.164970122972535,0,0,0,0,0.590603785761546,0.307435147943927,0.516856586336442,0,0,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0.913394847343798,0.938686832254841,0.847328283455281,1.98475558249466,1.31909002353184,0.968786560175433,0.603129249281559,0.477489376012546,0.492422699235184,2.33184669303881,0.927126510052548,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0.457556346413045,1.35982743995084,0.279902904647316,1.10559979043539,2.86401185404534,0,0.203319467126849,0.432021363287205,0.209088296014469,1.52853794622324,0.539457385539283,1.40510874733071,1.30877970992015,1.29614973291793,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0,0,0.234714477291508,0.2604087696879,0,0,0,0.632022241256357,1.21635129174099,0.924398614483445,0.649604114888975,0.179026695667481,0.39736270956253,0.240390899039938,0.443068581523732,0.100966449948148,0.15241361331,0.100826185136841,0.38983152295901,0.192423683280659,0.584384510907845,0.226730383615211,0,0.269141569828427,0.167884616364078,3.28422309854724,1.12609485270709,0.183151624267265,1.2862102744744,0,0,0.460325236507177,0.572895513439397,0,0,0,1.35004500046361,0,0,0,0.207574695168353,0,0,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,0.618105171716683,0.64183841918363,0,0.50695859978048,0,0.561849044819294,0.704276676453562,0.689225627467359,0.952587382566147,0.347652977834566,0.38581844092741,1.64834360321323,0.147198920134397,1.37147700954166,0.532427418478012,0.715308569841963,0.726732083161643,0.752875043322645,0.338458431566706,0.182927972872773,0.789209134313529,0.407412341537585,0,0.355905054372522,0.394017929502254,0.409231043169689,0.77468420592983,0.385813221962283,1.24905288968973,1.63752125911786,0.429742108096597,1.14772999241306,0.441182838239031,1.39120701372253 | |||
|short_description=p5@Gne | |||
}} |
Revision as of 05:03, 14 September 2013
Short description: | p5@Gne |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gne_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 44bp_to_ENSMUST00000173383_5end |
EntrezGene: | Gne |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.51e-09 | 20 |
epithelial cell | 1.04e-08 | 25 |
intestinal epithelial cell | 3.58e-08 | 9 |
epithelial cell of alimentary canal | 3.58e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.25e-12 | 15 |
intestine | 2.53e-11 | 31 |
intestinal mucosa | 5.21e-11 | 13 |
wall of intestine | 5.21e-11 | 13 |
gastrointestinal system mucosa | 5.21e-11 | 13 |
digestive system | 6.73e-11 | 116 |
digestive tract | 6.73e-11 | 116 |
primitive gut | 6.73e-11 | 116 |
endoderm-derived structure | 1.80e-10 | 118 |
endoderm | 1.80e-10 | 118 |
presumptive endoderm | 1.80e-10 | 118 |
subdivision of digestive tract | 7.56e-10 | 114 |
gastrointestinal system | 2.31e-09 | 47 |
digestive tract diverticulum | 1.60e-08 | 23 |
sac | 1.60e-08 | 23 |
epithelium of mucosa | 3.58e-08 | 9 |
gastrointestinal system epithelium | 3.58e-08 | 9 |
intestinal epithelium | 3.58e-08 | 9 |
liver | 1.18e-07 | 22 |
epithelial sac | 1.18e-07 | 22 |
digestive gland | 1.18e-07 | 22 |
epithelium of foregut-midgut junction | 1.18e-07 | 22 |
anatomical boundary | 1.18e-07 | 22 |
hepatobiliary system | 1.18e-07 | 22 |
foregut-midgut junction | 1.18e-07 | 22 |
hepatic diverticulum | 1.18e-07 | 22 |
liver primordium | 1.18e-07 | 22 |
septum transversum | 1.18e-07 | 22 |
liver bud | 1.18e-07 | 22 |
exocrine gland | 1.88e-07 | 25 |
exocrine system | 1.88e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.