FFCP PHASE1:Mm9::chr4:45824178..45824182,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=392|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:45824178..45824182,-|id=chr4:45824178..45824182,-|ontology_enrichment_celltype=CL:0000221!1.96e-21!44;CL:0000133!1.96e-21!44;CL:0002319!6.29e-20!43;CL:0000117!4.92e-17!23;CL:0000337!4.92e-17!23;CL:0000055!1.83e-16!50;CL:0002609!2.95e-16!6;CL:0000540!8.55e-15!33;CL:0000047!8.55e-15!33;CL:0000031!8.55e-15!33;CL:0000404!8.55e-15!33;CL:0000393!5.65e-12!39;CL:0000211!5.65e-12!39;CL:0002321!1.28e-11!70;CL:0000220!1.28e-11!70;CL:0000120!6.48e-09!3;CL:0002608!7.30e-09!3|ontology_enrichment_celltype_v019_2=CL:0002609,1.34e-15,6;CL:0000117,2.18e-09,23;CL:0000337,2.18e-09,23;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002608,1.13e-08,3;CL:0000120,1.88e-08,3;CL:0000540,8.60e-07,33;CL:0000047,8.60e-07,33;CL:0000031,8.60e-07,33;CL:0000404,8.60e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.89e-14!75;UBERON:0001016!1.89e-14!75;UBERON:0001017!1.15e-13!73;UBERON:0005743!1.15e-13!73;UBERON:0004121!3.44e-11!102;UBERON:0000924!3.44e-11!102;UBERON:0006601!3.44e-11!102;UBERON:0002020!2.74e-10!34;UBERON:0001954!3.85e-09!7;UBERON:0003022!3.85e-09!7;UBERON:0002421!3.85e-09!7;UBERON:0000349!3.85e-09!7;UBERON:0002600!3.85e-09!7;UBERON:0001049!4.76e-09!52;UBERON:0005068!4.76e-09!52;UBERON:0006241!4.76e-09!52;UBERON:0007135!4.76e-09!52;UBERON:0002791!8.12e-09!29;UBERON:0003528!8.12e-09!29;UBERON:0001893!8.12e-09!29;UBERON:0002780!2.14e-08!39;UBERON:0001890!2.14e-08!39;UBERON:0006240!2.14e-08!39;UBERON:0003080!4.07e-08!40;UBERON:0000033!1.05e-07!63;UBERON:0002616!3.23e-07!49;UBERON:0003056!3.56e-07!49;UBERON:0000955!5.17e-07!50;UBERON:0006238!5.17e-07!50;UBERON:0000956!7.25e-07!21;UBERON:0001869!7.25e-07!21;UBERON:0000203!7.25e-07!21|ontology_enrichment_uberon_v019_2=|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0,1.43752564364972,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.34796496001021,0.540023753326763,0.630974884054146,0,0,0.244981598429908,0.766763768145891,2.75765635983006,0,0,0,0.131886287730194,0.548925861614458,0,0,0,0,0.294628585473668,0,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr4:45824178..45824182,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=392 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:45824178..45824182,- | |||
|id=chr4:45824178..45824182,- | |||
|ontology_enrichment_celltype=CL:0000221!1.96e-21!44;CL:0000133!1.96e-21!44;CL:0002319!6.29e-20!43;CL:0000117!4.92e-17!23;CL:0000337!4.92e-17!23;CL:0000055!1.83e-16!50;CL:0002609!2.95e-16!6;CL:0000540!8.55e-15!33;CL:0000047!8.55e-15!33;CL:0000031!8.55e-15!33;CL:0000404!8.55e-15!33;CL:0000393!5.65e-12!39;CL:0000211!5.65e-12!39;CL:0002321!1.28e-11!70;CL:0000220!1.28e-11!70;CL:0000120!6.48e-09!3;CL:0002608!7.30e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.34e-15,6;CL:0000117,2.18e-09,23;CL:0000337,2.18e-09,23;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002608,1.13e-08,3;CL:0000120,1.88e-08,3;CL:0000540,8.60e-07,33;CL:0000047,8.60e-07,33;CL:0000031,8.60e-07,33;CL:0000404,8.60e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.89e-14!75;UBERON:0001016!1.89e-14!75;UBERON:0001017!1.15e-13!73;UBERON:0005743!1.15e-13!73;UBERON:0004121!3.44e-11!102;UBERON:0000924!3.44e-11!102;UBERON:0006601!3.44e-11!102;UBERON:0002020!2.74e-10!34;UBERON:0001954!3.85e-09!7;UBERON:0003022!3.85e-09!7;UBERON:0002421!3.85e-09!7;UBERON:0000349!3.85e-09!7;UBERON:0002600!3.85e-09!7;UBERON:0001049!4.76e-09!52;UBERON:0005068!4.76e-09!52;UBERON:0006241!4.76e-09!52;UBERON:0007135!4.76e-09!52;UBERON:0002791!8.12e-09!29;UBERON:0003528!8.12e-09!29;UBERON:0001893!8.12e-09!29;UBERON:0002780!2.14e-08!39;UBERON:0001890!2.14e-08!39;UBERON:0006240!2.14e-08!39;UBERON:0003080!4.07e-08!40;UBERON:0000033!1.05e-07!63;UBERON:0002616!3.23e-07!49;UBERON:0003056!3.56e-07!49;UBERON:0000955!5.17e-07!50;UBERON:0006238!5.17e-07!50;UBERON:0000956!7.25e-07!21;UBERON:0001869!7.25e-07!21;UBERON:0000203!7.25e-07!21 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0,1.43752564364972,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.34796496001021,0.540023753326763,0.630974884054146,0,0,0.244981598429908,0.766763768145891,2.75765635983006,0,0,0,0.131886287730194,0.548925861614458,0,0,0,0,0.294628585473668,0,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr4:45824178..45824182,- | |||
}} |
Revision as of 05:05, 14 September 2013
Short description: | p@chr4:45824178..45824182, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:45824178..45824182, - |
Coexpression cluster: | MCL_coexpression_mm9:392 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.34e-15 | 6 |
CNS neuron (sensu Vertebrata) | 2.18e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.18e-09 | 23 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
hippocampal neuron | 1.13e-08 | 3 |
granule cell | 1.88e-08 | 3 |
neuron | 8.60e-07 | 33 |
neuronal stem cell | 8.60e-07 | 33 |
neuroblast | 8.60e-07 | 33 |
electrically signaling cell | 8.60e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.