FFCP PHASE1:Hg19::chr8:41508327..41508355,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=157848|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26328|TSSclassifier=N|UniProt=A6NJ46|association_with_transcript=-316bp_to_ENST00000425142_5end|coexpression_cluster_id=C76|description=CAGE_peak_1_at_NKX6-3_5end|id=chr8:41508327..41508355,-|ontology_enrichment_celltype=CL:0002178!6.58e-13!3|ontology_enrichment_celltype_v019=CL:0002178;2.91e-27;3!CL:0002535;1.82e-11;2|ontology_enrichment_celltype_v019_2=CL:0002178,2.72e-27,3;CL:0002535,1.82e-11,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3493!7.68e-19!2;DOID:1799!3.40e-10!1;DOID:10165!3.40e-10!1;DOID:1798!3.40e-10!1;DOID:0050687!8.14e-07!143|ontology_enrichment_disease_v019=DOID:3493;2.72e-40;2!DOID:1799;8.53e-21;1!DOID:10165;8.53e-21;1!DOID:1798;8.53e-21;1!DOID:299;4.28e-13;25|ontology_enrichment_disease_v019_2=DOID:3493,3.01e-40,2;DOID:1799,7.72e-21,1;DOID:10165,7.72e-21,1;DOID:1798,7.72e-21,1;DOID:299,4.29e-13,25|ontology_enrichment_uberon=UBERON:0000945!1.29e-10!8;UBERON:0010039!1.29e-10!8;UBERON:0005409!2.15e-08!35|ontology_enrichment_uberon_v019=UBERON:0000945;5.57e-36;5!UBERON:0010039;5.57e-36;5!UBERON:0005409;3.81e-14;22!UBERON:0001041;2.40e-13;14!UBERON:0006955;1.82e-11;2!UBERON:0004801;1.82e-11;2!UBERON:0004921;1.94e-08;33!UBERON:0002114;5.54e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000945,8.05e-23,8;UBERON:0010039,8.05e-23,8;UBERON:0005409,1.45e-12,25;UBERON:0006955,1.82e-11,2;UBERON:0004801,1.82e-11,2;UBERON:0002114,5.54e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,1.16794399198336,0,0,0,0,0,0,7.29848107592057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,217.921826893949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,9.67925728389311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,4.19600180122473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83334686136996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23895770930302,4.14520944939716,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0,0,0.631086248772738,0.0679914901909147,0,6.87734892670021,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426909383510862,0,0,0,0,0,0,0,0|short_description=p1@NKX6-3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=157848 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26328 | |||
|TSSclassifier=N | |||
|UniProt=A6NJ46 | |||
|association_with_transcript=-316bp_to_ENST00000425142_5end | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_1_at_NKX6-3_5end | |||
|id=chr8:41508327..41508355,- | |||
|ontology_enrichment_celltype=CL:0002178!6.58e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.91e-27;3!CL:0002535;1.82e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.72e-27,3;CL:0002535,1.82e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!7.68e-19!2;DOID:1799!3.40e-10!1;DOID:10165!3.40e-10!1;DOID:1798!3.40e-10!1;DOID:0050687!8.14e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.72e-40;2!DOID:1799;8.53e-21;1!DOID:10165;8.53e-21;1!DOID:1798;8.53e-21;1!DOID:299;4.28e-13;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.01e-40,2;DOID:1799,7.72e-21,1;DOID:10165,7.72e-21,1;DOID:1798,7.72e-21,1;DOID:299,4.29e-13,25 | |||
|ontology_enrichment_uberon=UBERON:0000945!1.29e-10!8;UBERON:0010039!1.29e-10!8;UBERON:0005409!2.15e-08!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;5.57e-36;5!UBERON:0010039;5.57e-36;5!UBERON:0005409;3.81e-14;22!UBERON:0001041;2.40e-13;14!UBERON:0006955;1.82e-11;2!UBERON:0004801;1.82e-11;2!UBERON:0004921;1.94e-08;33!UBERON:0002114;5.54e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,8.05e-23,8;UBERON:0010039,8.05e-23,8;UBERON:0005409,1.45e-12,25;UBERON:0006955,1.82e-11,2;UBERON:0004801,1.82e-11,2;UBERON:0002114,5.54e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,1.16794399198336,0,0,0,0,0,0,7.29848107592057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,217.921826893949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,9.67925728389311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,4.19600180122473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83334686136996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23895770930302,4.14520944939716,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0,0,0.631086248772738,0.0679914901909147,0,6.87734892670021,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426909383510862,0,0,0,0,0,0,0,0 | |||
|short_description=p1@NKX6-3 | |||
}} |
Revision as of 05:18, 14 September 2013
Short description: | p1@NKX6-3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NKX6-3_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -316bp_to_ENST00000425142_5end |
EntrezGene: | NKX6-3 |
HGNC: | 26328 |
UniProt: | A6NJ46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.72e-27 | 3 |
epithelial cell of cervix | 1.82e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
stomach | 8.05e-23 | 8 |
food storage organ | 8.05e-23 | 8 |
gastrointestinal system | 1.45e-12 | 25 |
uterine epithelium | 1.82e-11 | 2 |
cervix epithelium | 1.82e-11 | 2 |
duodenum | 5.54e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.01e-40 | 2 |
islet cell tumor | 7.72e-21 | 1 |
endocrine pancreas cancer | 7.72e-21 | 1 |
pancreatic endocrine carcinoma | 7.72e-21 | 1 |
adenocarcinoma | 4.29e-13 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.