FFCP PHASE1:Hg19::chr8:57358432..57358446,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5179|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8831|TSSclassifier=W|UniProt=|association_with_transcript=-225bp_to_ENST00000523274_5end|coexpression_cluster_id=C309|description=CAGE_peak_3_at_PENK_5end|id=chr8:57358432..57358446,-|ontology_enrichment_celltype=CL:0000153!3.34e-18!9;CL:0000447!3.34e-18!9;CL:0000667!9.59e-15!6;CL:0000058!9.59e-15!6;CL:0000138!9.59e-15!6;CL:0000499!5.16e-13!27;CL:0000327!2.75e-11!14;CL:0000135!3.85e-11!3;CL:0000386!3.85e-11!3;CL:0000388!3.85e-11!3;CL:0002556!3.22e-09!6|ontology_enrichment_celltype_v019=CL:0000138;1.06e-36;6!CL:0000153;8.33e-35;9!CL:0000447;8.33e-35;9!CL:0000135;1.28e-26;3!CL:0000388;1.28e-26;3!CL:0000499;4.73e-24;28!CL:0000327;9.54e-21;15!CL:0002556;8.89e-14;6!CL:0000151;1.64e-07;36|ontology_enrichment_celltype_v019_2=CL:0000058,1.14e-36,6;CL:0000138,1.14e-36,6;CL:0000153,7.86e-35,9;CL:0000447,7.86e-35,9;CL:0000135,1.46e-26,3;CL:0000388,1.46e-26,3;CL:0000499,4.80e-24,28;CL:0000327,9.22e-21,15;CL:0002556,7.64e-14,6;CL:0000151,2.18e-08,36|ontology_enrichment_development_v019=UBERON:0003099;1.65e-10;1!UBERON:0003852;1.65e-10;1!UBERON:0006222;2.97e-10;1|ontology_enrichment_disease=DOID:3193!1.72e-07!2;DOID:962!1.72e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!7.41e-14!4;UBERON:0002435!7.41e-14!4;UBERON:0000204!7.41e-14!4;UBERON:0010082!7.41e-14!4;UBERON:0000043!3.85e-11!3;UBERON:0005383!5.93e-11!3;UBERON:0005382!5.93e-11!3;UBERON:0003129!1.95e-10!11;UBERON:0001758!3.22e-09!6;UBERON:0003672!3.22e-09!6;UBERON:0000075!1.02e-08!13;UBERON:0005944!1.02e-08!13;UBERON:0004288!1.02e-08!13;UBERON:0003089!1.02e-08!13;UBERON:0009663!6.52e-08!7;UBERON:0001873!9.24e-08!2;UBERON:0010122!9.24e-08!2;UBERON:0000924!3.82e-07!173;UBERON:0006601!3.82e-07!173|ontology_enrichment_uberon_v019=UBERON:0007846;1.28e-26;3!UBERON:0000043;1.28e-26;3!UBERON:0007845;1.28e-26;3!UBERON:0001758;8.89e-14;6!UBERON:0003672;8.89e-14;6!UBERON:0011137;3.90e-13;11!UBERON:0010323;3.90e-13;11!UBERON:0005383;2.00e-12;3!UBERON:0005382;2.00e-12;3!UBERON:0003129;6.89e-12;7!UBERON:0005705;1.65e-10;1!UBERON:0008193;1.65e-10;1!UBERON:0010912;1.65e-10;1!UBERON:0002514;1.65e-10;1!UBERON:0003457;1.65e-10;1!UBERON:0008907;1.65e-10;1!UBERON:0008001;1.65e-10;1!UBERON:0007213;1.65e-10;1!UBERON:0009891;1.65e-10;1!UBERON:0007914;1.65e-10;1!UBERON:0007375;1.65e-10;1!UBERON:0003323;1.65e-10;1!UBERON:0010258;1.65e-10;1!UBERON:0005253;1.65e-10;1!UBERON:0007842;1.65e-10;1!UBERON:0002397;1.65e-10;1!UBERON:0003113;1.65e-10;1!UBERON:0003277;1.65e-10;1!UBERON:0001709;1.65e-10;1!UBERON:0002244;1.65e-10;1!UBERON:0005620;1.65e-10;1!UBERON:0010364;1.65e-10;1!UBERON:0004288;1.65e-10;1!UBERON:0001874;4.44e-10;1!UBERON:0000369;1.52e-09;4!UBERON:0002435;1.52e-09;4!UBERON:0000204;1.52e-09;4!UBERON:0000075;4.41e-09;16!UBERON:0001434;2.50e-07;36|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.46e-26,3;UBERON:0000043,1.46e-26,3;UBERON:0007845,1.46e-26,3;UBERON:0001758,7.64e-14,6;UBERON:0003672,7.64e-14,6;UBERON:0010323,3.50e-13,11;UBERON:0005383,1.68e-12,3;UBERON:0005382,1.68e-12,3;UBERON:0003129,6.05e-12,7;UBERON:0005705,1.65e-10,1;UBERON:0008193,1.65e-10,1;UBERON:0010912,1.65e-10,1;UBERON:0002514,1.65e-10,1;UBERON:0003457,1.65e-10,1;UBERON:0008907,1.65e-10,1;UBERON:0008001,1.65e-10,1;UBERON:0007213,1.65e-10,1;UBERON:0009891,1.65e-10,1;UBERON:0007914,1.65e-10,1;UBERON:0009292,1.65e-10,1;UBERON:0003099,1.65e-10,1;UBERON:0007375,1.65e-10,1;UBERON:0003323,1.65e-10,1;UBERON:0010258,1.65e-10,1;UBERON:0007842,1.65e-10,1;UBERON:0009494,1.65e-10,1;UBERON:0010042,1.65e-10,1;UBERON:0010045,1.65e-10,1;UBERON:0010259,1.65e-10,1;UBERON:0010359,1.65e-10,1;UBERON:0009526,1.65e-10,1;UBERON:0002397,1.65e-10,1;UBERON:0003113,1.65e-10,1;UBERON:0003277,1.65e-10,1;UBERON:0001709,1.65e-10,1;UBERON:0004066,1.65e-10,1;UBERON:0002244,1.65e-10,1;UBERON:0005620,1.65e-10,1;UBERON:0004362,1.65e-10,1;UBERON:0010364,1.65e-10,1;UBERON:0010046,1.65e-10,1;UBERON:0005868,1.65e-10,1;UBERON:0007238,1.65e-10,1;UBERON:0004288,1.65e-10,1;UBERON:0004068,1.65e-10,1;UBERON:0010334,1.65e-10,1;UBERON:0003852,1.65e-10,1;UBERON:0010253,1.65e-10,1;UBERON:0011137,2.14e-10,14;UBERON:0001874,4.06e-10,1;UBERON:0000369,1.34e-09,4;UBERON:0002435,1.34e-09,4;UBERON:0000204,1.34e-09,4;UBERON:0010082,1.34e-09,4;UBERON:0000075,4.09e-09,16;UBERON:0000165,1.67e-07,29;UBERON:0000930,1.67e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,1.50401373190767,7.53201898596283,5.5670016293577,15.5723158496843,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859840221182376,0,2.37600571456411,0.989067717114227,0,0,0,0.12511851987196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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8831 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-225bp_to_ENST00000523274_5end | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_3_at_PENK_5end | |||
|id=chr8:57358432..57358446,- | |||
|ontology_enrichment_celltype=CL:0000153!3.34e-18!9;CL:0000447!3.34e-18!9;CL:0000667!9.59e-15!6;CL:0000058!9.59e-15!6;CL:0000138!9.59e-15!6;CL:0000499!5.16e-13!27;CL:0000327!2.75e-11!14;CL:0000135!3.85e-11!3;CL:0000386!3.85e-11!3;CL:0000388!3.85e-11!3;CL:0002556!3.22e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.06e-36;6!CL:0000153;8.33e-35;9!CL:0000447;8.33e-35;9!CL:0000135;1.28e-26;3!CL:0000388;1.28e-26;3!CL:0000499;4.73e-24;28!CL:0000327;9.54e-21;15!CL:0002556;8.89e-14;6!CL:0000151;1.64e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.14e-36,6;CL:0000138,1.14e-36,6;CL:0000153,7.86e-35,9;CL:0000447,7.86e-35,9;CL:0000135,1.46e-26,3;CL:0000388,1.46e-26,3;CL:0000499,4.80e-24,28;CL:0000327,9.22e-21,15;CL:0002556,7.64e-14,6;CL:0000151,2.18e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.65e-10;1!UBERON:0003852;1.65e-10;1!UBERON:0006222;2.97e-10;1 | |||
|ontology_enrichment_disease=DOID:3193!1.72e-07!2;DOID:962!1.72e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!7.41e-14!4;UBERON:0002435!7.41e-14!4;UBERON:0000204!7.41e-14!4;UBERON:0010082!7.41e-14!4;UBERON:0000043!3.85e-11!3;UBERON:0005383!5.93e-11!3;UBERON:0005382!5.93e-11!3;UBERON:0003129!1.95e-10!11;UBERON:0001758!3.22e-09!6;UBERON:0003672!3.22e-09!6;UBERON:0000075!1.02e-08!13;UBERON:0005944!1.02e-08!13;UBERON:0004288!1.02e-08!13;UBERON:0003089!1.02e-08!13;UBERON:0009663!6.52e-08!7;UBERON:0001873!9.24e-08!2;UBERON:0010122!9.24e-08!2;UBERON:0000924!3.82e-07!173;UBERON:0006601!3.82e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.28e-26;3!UBERON:0000043;1.28e-26;3!UBERON:0007845;1.28e-26;3!UBERON:0001758;8.89e-14;6!UBERON:0003672;8.89e-14;6!UBERON:0011137;3.90e-13;11!UBERON:0010323;3.90e-13;11!UBERON:0005383;2.00e-12;3!UBERON:0005382;2.00e-12;3!UBERON:0003129;6.89e-12;7!UBERON:0005705;1.65e-10;1!UBERON:0008193;1.65e-10;1!UBERON:0010912;1.65e-10;1!UBERON:0002514;1.65e-10;1!UBERON:0003457;1.65e-10;1!UBERON:0008907;1.65e-10;1!UBERON:0008001;1.65e-10;1!UBERON:0007213;1.65e-10;1!UBERON:0009891;1.65e-10;1!UBERON:0007914;1.65e-10;1!UBERON:0007375;1.65e-10;1!UBERON:0003323;1.65e-10;1!UBERON:0010258;1.65e-10;1!UBERON:0005253;1.65e-10;1!UBERON:0007842;1.65e-10;1!UBERON:0002397;1.65e-10;1!UBERON:0003113;1.65e-10;1!UBERON:0003277;1.65e-10;1!UBERON:0001709;1.65e-10;1!UBERON:0002244;1.65e-10;1!UBERON:0005620;1.65e-10;1!UBERON:0010364;1.65e-10;1!UBERON:0004288;1.65e-10;1!UBERON:0001874;4.44e-10;1!UBERON:0000369;1.52e-09;4!UBERON:0002435;1.52e-09;4!UBERON:0000204;1.52e-09;4!UBERON:0000075;4.41e-09;16!UBERON:0001434;2.50e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.46e-26,3;UBERON:0000043,1.46e-26,3;UBERON:0007845,1.46e-26,3;UBERON:0001758,7.64e-14,6;UBERON:0003672,7.64e-14,6;UBERON:0010323,3.50e-13,11;UBERON:0005383,1.68e-12,3;UBERON:0005382,1.68e-12,3;UBERON:0003129,6.05e-12,7;UBERON:0005705,1.65e-10,1;UBERON:0008193,1.65e-10,1;UBERON:0010912,1.65e-10,1;UBERON:0002514,1.65e-10,1;UBERON:0003457,1.65e-10,1;UBERON:0008907,1.65e-10,1;UBERON:0008001,1.65e-10,1;UBERON:0007213,1.65e-10,1;UBERON:0009891,1.65e-10,1;UBERON:0007914,1.65e-10,1;UBERON:0009292,1.65e-10,1;UBERON:0003099,1.65e-10,1;UBERON:0007375,1.65e-10,1;UBERON:0003323,1.65e-10,1;UBERON:0010258,1.65e-10,1;UBERON:0007842,1.65e-10,1;UBERON:0009494,1.65e-10,1;UBERON:0010042,1.65e-10,1;UBERON:0010045,1.65e-10,1;UBERON:0010259,1.65e-10,1;UBERON:0010359,1.65e-10,1;UBERON:0009526,1.65e-10,1;UBERON:0002397,1.65e-10,1;UBERON:0003113,1.65e-10,1;UBERON:0003277,1.65e-10,1;UBERON:0001709,1.65e-10,1;UBERON:0004066,1.65e-10,1;UBERON:0002244,1.65e-10,1;UBERON:0005620,1.65e-10,1;UBERON:0004362,1.65e-10,1;UBERON:0010364,1.65e-10,1;UBERON:0010046,1.65e-10,1;UBERON:0005868,1.65e-10,1;UBERON:0007238,1.65e-10,1;UBERON:0004288,1.65e-10,1;UBERON:0004068,1.65e-10,1;UBERON:0010334,1.65e-10,1;UBERON:0003852,1.65e-10,1;UBERON:0010253,1.65e-10,1;UBERON:0011137,2.14e-10,14;UBERON:0001874,4.06e-10,1;UBERON:0000369,1.34e-09,4;UBERON:0002435,1.34e-09,4;UBERON:0000204,1.34e-09,4;UBERON:0010082,1.34e-09,4;UBERON:0000075,4.09e-09,16;UBERON:0000165,1.67e-07,29;UBERON:0000930,1.67e-07,29 | |||
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|short_description=p3@PENK | |||
}} |
Revision as of 05:37, 14 September 2013
Short description: | p3@PENK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PENK_5end |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | -225bp_to_ENST00000523274_5end |
EntrezGene: | PENK |
HGNC: | 8831 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.14e-36 | 6 |
chondrocyte | 1.14e-36 | 6 |
GAG secreting cell | 7.86e-35 | 9 |
carbohydrate secreting cell | 7.86e-35 | 9 |
fibrocyte | 1.46e-26 | 3 |
tendon cell | 1.46e-26 | 3 |
stromal cell | 4.80e-24 | 28 |
extracellular matrix secreting cell | 9.22e-21 | 15 |
fibroblast of periodontium | 7.64e-14 | 6 |
secretory cell | 2.18e-08 | 36 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.