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FFCP PHASE1:Mm9::chr5:106161101..106161130,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=231549|HGNC=|UniProt=D3YV62|association_with_transcript=19bp_to_ENSMUST00000154807_5end|description=CAGE_peak_4_at_Lrrc8d_5end|id=chr5:106161101..106161130,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!4.08e-10!66;UBERON:0005157!1.33e-09!27;UBERON:0005177!7.51e-09!85;UBERON:0002048!2.49e-08!14;UBERON:0000117!2.49e-08!14;UBERON:0000171!2.49e-08!14;UBERON:0000170!2.49e-08!14;UBERON:0005597!2.49e-08!14;UBERON:0000118!2.49e-08!14;UBERON:0002100!2.77e-08!98;UBERON:0005153!4.28e-08!17;UBERON:0000926!2.49e-07!193;UBERON:0004120!2.49e-07!193;UBERON:0006603!2.49e-07!193;UBERON:0003104!2.54e-07!131;UBERON:0009142!2.54e-07!131;UBERON:0000464!6.30e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0009569,2.02e-17,66;UBERON:0005177,3.13e-15,79;UBERON:0002369,3.88e-13,7;UBERON:0006858,3.88e-13,7;UBERON:0002048,4.80e-13,14;UBERON:0000117,4.80e-13,14;UBERON:0000171,4.80e-13,14;UBERON:0000170,4.80e-13,14;UBERON:0005597,4.80e-13,14;UBERON:0000118,4.80e-13,14;UBERON:0002100,2.59e-12,90;UBERON:0005153,4.67e-12,17;UBERON:0005178,2.85e-10,17;UBERON:0005181,2.85e-10,17;UBERON:0002224,2.85e-10,17;UBERON:0000915,2.85e-10,17;UBERON:0008947,2.85e-10,17;UBERON:0003258,2.85e-10,17;UBERON:0005157,8.26e-10,20;UBERON:0005172,6.15e-09,49;UBERON:0005173,6.15e-09,49;UBERON:0002417,6.15e-09,49;UBERON:0000916,6.15e-09,49;UBERON:0003104,6.09e-08,61;UBERON:0009142,6.09e-08,61|phase1_expression=1.44133962394315,0,0,0,0,0,0,0.129123323441576,0.84473233291,0.468129052643987,0,0.0797721589953364,0,0,0,0.607425802169478,0,0,0,0,0.340173160604279,0.198581902401771,0.522399578277871,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,0,0.878744730937887,0.388859798148567,3.49966054063406,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,6.43804610931351,0.889294796111139,0,0,0,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0,0,0.530083353332288,0.68014404096107,0,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,12.6175818205101,1.73485326766136,3.04465478312141,3.68984795609694,3.46662073271032,4.9387256996996,3.14166478324189,0.741584903203122,0.144599356919912,3.5384422077995,0.808834249737046,1.10420759230197,0.969750506270444,0,0.292780797011547,0,0.255457055208591,0.479260498023681,1.19980546198682,0.254140454146129,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0.407357455401265,0.870848794270651,0,0.420883711772948,0,0.229902104433473,0,0.150704817835715,0.476255494059295,0.768682321709099,0.281105173679186,0.258703370739016,0.215567992932842,0.567318240503458,0.527853372491847,0.219195732427575,0.834141747676794,0.348252166522167,0.205782136407943,0.59710280045548,0,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.729619285912702,0.584799949701329,1.53685080703735,0.939444931322602,0.630869845692382,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0.605050573870028,0,0,0,0.494096864172033,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,2.25415471346161,2.03651327845314,0.969762435838129,1.96380295692892,3.16182685621286,3.39503340353085,4.70996183524124,5.42947521255922,0,2.33583148002532,2.16214894624523,1.79889689907883,0.811440485554012,0.72353147925725,0.25462585178142,1.43848068725405,0.486405680325106,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,1.66277871149944,0.568474235311454,0.814824882210129,2.03694102930226,1.17345124144251,2.01007508930179,2.85652369063216,1.56106918286239,2.04925687338048,2.6575762757853,1.75400245523236,0.983179888294428,3.45369963731791,3.03763023021174,1.50791283939272,0.54390568381871,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0.327869890753351,1.51482556322624,0,0,0,0,0,0,0.404810701674894,0,1.18586333383957,0.642642632843614,0.851640511249612,0.178065603667255,0.81443479676788,0.329940245945071,0,0.485561272309963,0.906970670894253,0.565815239267694,0.885905678642318,0.614870295887855,1.03371317267288,1.09060118843252,0.356497378384721,0.632073515871632,0,0,1.70219802876894,0.36012218806262,0.129358683782755,0.643011105094777,0.532020700926821,0.713475270408282,0.822745103010605,0.913394847343798,0.704015124191131,1.48282449604674,0.220528398054962,0.65954501176592,0.161464426695906,0.482503399425247,0.358117032009409,0.492422699235184,0.291480836629851,0.370850604021019,0.512612642393558,0.619160603889667,0.925972636848558,0.941842285023455,0.546776910884101,1.60144721244566,0.849892149969277,1.11961161858926,1.24379976423981,0,0.632671987162271,0.609958401380546,0.540026704109006,0.418176592028937,1.09181281873089,0.674321731924103,0.826534557253359,1.30877970992015,0.648074866458964,1.24267862617385,0.56369293868419,0.598066184175915,0.66183396182839,0.777804753376191,0.129159823477731,0.506868376472335,0.58678619322877,0.2604087696879,0,0.483168241652012,0.288030006257865,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0,0.226730383615211,0,0.717710852875806,0,0.772758376128762,0.750729901804728,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,1.01391719956096,0.943131706930381,0.187283014939765,1.15245274328765,0.0574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.883193520806384,1.37147700954166,0.70990322463735,0.476872379894642,0.872078499793971,0.564656282491984,0.507687647350059,0.914639864363863,0.526139422875686,0.135804113845862,0.561142271657738,0,0.29551344712669,0.818462086339379,0.464810523557898,0.385813221962283,0,0.467863216890817,0.429742108096597,0.765153328275374,0.882365676478062,1.15933917810211|short_description=p4@Lrrc8d}}
|EntrezGene=231549
|HGNC=
|UniProt=D3YV62
|association_with_transcript=19bp_to_ENSMUST00000154807_5end
|description=CAGE_peak_4_at_Lrrc8d_5end
|id=chr5:106161101..106161130,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!4.08e-10!66;UBERON:0005157!1.33e-09!27;UBERON:0005177!7.51e-09!85;UBERON:0002048!2.49e-08!14;UBERON:0000117!2.49e-08!14;UBERON:0000171!2.49e-08!14;UBERON:0000170!2.49e-08!14;UBERON:0005597!2.49e-08!14;UBERON:0000118!2.49e-08!14;UBERON:0002100!2.77e-08!98;UBERON:0005153!4.28e-08!17;UBERON:0000926!2.49e-07!193;UBERON:0004120!2.49e-07!193;UBERON:0006603!2.49e-07!193;UBERON:0003104!2.54e-07!131;UBERON:0009142!2.54e-07!131;UBERON:0000464!6.30e-07!57
|ontology_enrichment_uberon_v019_2=UBERON:0009569,2.02e-17,66;UBERON:0005177,3.13e-15,79;UBERON:0002369,3.88e-13,7;UBERON:0006858,3.88e-13,7;UBERON:0002048,4.80e-13,14;UBERON:0000117,4.80e-13,14;UBERON:0000171,4.80e-13,14;UBERON:0000170,4.80e-13,14;UBERON:0005597,4.80e-13,14;UBERON:0000118,4.80e-13,14;UBERON:0002100,2.59e-12,90;UBERON:0005153,4.67e-12,17;UBERON:0005178,2.85e-10,17;UBERON:0005181,2.85e-10,17;UBERON:0002224,2.85e-10,17;UBERON:0000915,2.85e-10,17;UBERON:0008947,2.85e-10,17;UBERON:0003258,2.85e-10,17;UBERON:0005157,8.26e-10,20;UBERON:0005172,6.15e-09,49;UBERON:0005173,6.15e-09,49;UBERON:0002417,6.15e-09,49;UBERON:0000916,6.15e-09,49;UBERON:0003104,6.09e-08,61;UBERON:0009142,6.09e-08,61
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0.129123323441576,0.84473233291,0.468129052643987,0,0.0797721589953364,0,0,0,0.607425802169478,0,0,0,0,0.340173160604279,0.198581902401771,0.522399578277871,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,0,0.878744730937887,0.388859798148567,3.49966054063406,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,6.43804610931351,0.889294796111139,0,0,0,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0,0,0.530083353332288,0.68014404096107,0,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,12.6175818205101,1.73485326766136,3.04465478312141,3.68984795609694,3.46662073271032,4.9387256996996,3.14166478324189,0.741584903203122,0.144599356919912,3.5384422077995,0.808834249737046,1.10420759230197,0.969750506270444,0,0.292780797011547,0,0.255457055208591,0.479260498023681,1.19980546198682,0.254140454146129,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0.407357455401265,0.870848794270651,0,0.420883711772948,0,0.229902104433473,0,0.150704817835715,0.476255494059295,0.768682321709099,0.281105173679186,0.258703370739016,0.215567992932842,0.567318240503458,0.527853372491847,0.219195732427575,0.834141747676794,0.348252166522167,0.205782136407943,0.59710280045548,0,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.729619285912702,0.584799949701329,1.53685080703735,0.939444931322602,0.630869845692382,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0.605050573870028,0,0,0,0.494096864172033,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,2.25415471346161,2.03651327845314,0.969762435838129,1.96380295692892,3.16182685621286,3.39503340353085,4.70996183524124,5.42947521255922,0,2.33583148002532,2.16214894624523,1.79889689907883,0.811440485554012,0.72353147925725,0.25462585178142,1.43848068725405,0.486405680325106,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,1.66277871149944,0.568474235311454,0.814824882210129,2.03694102930226,1.17345124144251,2.01007508930179,2.85652369063216,1.56106918286239,2.04925687338048,2.6575762757853,1.75400245523236,0.983179888294428,3.45369963731791,3.03763023021174,1.50791283939272,0.54390568381871,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0.327869890753351,1.51482556322624,0,0,0,0,0,0,0.404810701674894,0,1.18586333383957,0.642642632843614,0.851640511249612,0.178065603667255,0.81443479676788,0.329940245945071,0,0.485561272309963,0.906970670894253,0.565815239267694,0.885905678642318,0.614870295887855,1.03371317267288,1.09060118843252,0.356497378384721,0.632073515871632,0,0,1.70219802876894,0.36012218806262,0.129358683782755,0.643011105094777,0.532020700926821,0.713475270408282,0.822745103010605,0.913394847343798,0.704015124191131,1.48282449604674,0.220528398054962,0.65954501176592,0.161464426695906,0.482503399425247,0.358117032009409,0.492422699235184,0.291480836629851,0.370850604021019,0.512612642393558,0.619160603889667,0.925972636848558,0.941842285023455,0.546776910884101,1.60144721244566,0.849892149969277,1.11961161858926,1.24379976423981,0,0.632671987162271,0.609958401380546,0.540026704109006,0.418176592028937,1.09181281873089,0.674321731924103,0.826534557253359,1.30877970992015,0.648074866458964,1.24267862617385,0.56369293868419,0.598066184175915,0.66183396182839,0.777804753376191,0.129159823477731,0.506868376472335,0.58678619322877,0.2604087696879,0,0.483168241652012,0.288030006257865,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0,0.226730383615211,0,0.717710852875806,0,0.772758376128762,0.750729901804728,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,1.01391719956096,0.943131706930381,0.187283014939765,1.15245274328765,0.0574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.883193520806384,1.37147700954166,0.70990322463735,0.476872379894642,0.872078499793971,0.564656282491984,0.507687647350059,0.914639864363863,0.526139422875686,0.135804113845862,0.561142271657738,0,0.29551344712669,0.818462086339379,0.464810523557898,0.385813221962283,0,0.467863216890817,0.429742108096597,0.765153328275374,0.882365676478062,1.15933917810211
|short_description=p4@Lrrc8d
}}

Revision as of 05:50, 14 September 2013

Short description:p4@Lrrc8d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Lrrc8d_5end
Coexpression cluster:NA
Association with transcript: 19bp_to_ENSMUST00000154807_5end
EntrezGene:Lrrc8d
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Lrrc8d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D712.62
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C14.94
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D53.16
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of trunk2.02e-1766
trunk region element3.13e-1579
adrenal gland3.88e-137
adrenal/interrenal gland3.88e-137
lung4.80e-1314
respiratory tube4.80e-1314
respiration organ4.80e-1314
pair of lungs4.80e-1314
lung primordium4.80e-1314
lung bud4.80e-1314
trunk2.59e-1290
epithelial bud4.67e-1217
thoracic cavity element2.85e-1017
thoracic segment organ2.85e-1017
thoracic cavity2.85e-1017
thoracic segment of trunk2.85e-1017
respiratory primordium2.85e-1017
endoderm of foregut2.85e-1017
epithelial fold8.26e-1020
abdomen element6.15e-0949
abdominal segment element6.15e-0949
abdominal segment of trunk6.15e-0949
abdomen6.15e-0949
mesenchyme6.09e-0861
entire embryonic mesenchyme6.09e-0861







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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