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FFCP PHASE1:Mm9::chr5:111239134..111239152,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=22241|HGNC=|UniProt=O70405|association_with_transcript=-18bp_to_ENSMUST00000031490_5end|description=CAGE_peak_3_at_Ulk1_5end|id=chr5:111239134..111239152,-|ontology_enrichment_celltype=CL:0000117!5.71e-08!23;CL:0000337!5.71e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.47e-08,23;CL:0000337,5.47e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.96e-12!73;UBERON:0005743!3.96e-12!73;UBERON:0001049!5.01e-12!52;UBERON:0005068!5.01e-12!52;UBERON:0006241!5.01e-12!52;UBERON:0007135!5.01e-12!52;UBERON:0004111!1.95e-11!122;UBERON:0000025!2.48e-11!114;UBERON:0000073!4.64e-11!75;UBERON:0001016!4.64e-11!75;UBERON:0000955!2.73e-10!50;UBERON:0006238!2.73e-10!50;UBERON:0002616!5.17e-10!49;UBERON:0004121!7.32e-10!102;UBERON:0000924!7.32e-10!102;UBERON:0006601!7.32e-10!102;UBERON:0002346!8.99e-10!71;UBERON:0003075!8.99e-10!71;UBERON:0007284!8.99e-10!71;UBERON:0002020!4.37e-09!34;UBERON:0000033!4.09e-08!63;UBERON:0002791!1.85e-07!29;UBERON:0003528!1.85e-07!29;UBERON:0001893!1.85e-07!29;UBERON:0003080!3.15e-07!40;UBERON:0002780!9.04e-07!39;UBERON:0001890!9.04e-07!39;UBERON:0006240!9.04e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.37e-12,73;UBERON:0001049,4.82e-12,52;UBERON:0005068,4.82e-12,52;UBERON:0006241,4.82e-12,52;UBERON:0007135,4.82e-12,52;UBERON:0000073,1.04e-11,54;UBERON:0004111,2.00e-11,122;UBERON:0000025,2.43e-11,114;UBERON:0001016,4.37e-11,75;UBERON:0002346,1.91e-10,64;UBERON:0003075,1.91e-10,64;UBERON:0007284,1.91e-10,64;UBERON:0004121,3.14e-10,95;UBERON:0000924,3.14e-10,95;UBERON:0006601,3.14e-10,95;UBERON:0000955,4.39e-10,47;UBERON:0006238,4.39e-10,47;UBERON:0002616,8.31e-10,46;UBERON:0010314,1.73e-09,92;UBERON:0010371,2.58e-09,73;UBERON:0002020,4.29e-09,34;UBERON:0003528,1.83e-07,29;UBERON:0002791,1.83e-07,29;UBERON:0001893,1.83e-07,29;UBERON:0003080,3.12e-07,40;UBERON:0002780,8.96e-07,39;UBERON:0001890,8.96e-07,39;UBERON:0006240,8.96e-07,39|phase1_expression=1.60148847104794,0.348975407639361,0.454999239389536,1.51232105653415,2.00358291978539,0.503637815735669,1.63528848416868,0.903863264091034,0.985521055061667,0.468129052643987,0.34243593645101,1.03703806693937,1.02720437958723,0.437102012094987,3.33109761815663,4.25198061518635,6.29605690315332,0.315462165358238,1.09691546884591,0.84877930359606,2.46625541438102,0.496454756004426,0,0.95995453676044,0.68822784320151,0.57423196411502,0.86152399231815,0.646413698057667,0.760093677825496,0.252030129759931,0.221730510655305,0.635030673459631,2.46025915033828,0,0.866554859253824,0,1.02084678131185,5.02237956884289,1.5626706890476,2.09409497589519,4.70585190424811,4.78131839470912,5.82612423637384,2.01434908760924,2.33166941804883,2.75320128242522,10.9534788208725,3.2703773457067,2.63623419281366,4.27745777963423,2.93971485413261,2.87505128729943,1.00669563634642,1.45072428402269,1.34437519656986,2.82985379639542,2.0057340795713,1.54701627683233,5.86717736492834,3.70293685490423,6.33831403506179,3.72728985276045,2.66788438833342,2.2497492932035,2.96659908770092,1.4209602298922,2.09720077362883,3.45796474789399,3.94020526772215,3.24014251996058,3.57552434297349,3.71346279724945,2.87129103237098,2.08234358665422,3.73797336971122,7.35375029288017,1.10115880999389,4.46905683298157,4.45458946443106,5.93488294785872,3.7509933876988,4.68822033501084,5.30447698102624,2.8138130501584,3.97275444219706,4.12480019663135,3.98640706237488,5.96478226640962,0.757261933331841,1.51143120213571,3.18850937571846,3.44169550792555,1.3599426674155,4.85732872474035,3.89865850468601,2.24013443548668,4.0728881838208,0.681721290312231,1.03914401841148,0.70667914902068,0.704217098883403,1.28326477414318,2.54805239706646,0,0.432982082022428,1.01343946190039,0,1.94112595522402,2.33044095282455,2.52351636410202,1.73485326766136,2.13125834818499,2.7673859670727,1.3565037649736,3.29248379979973,2.89033160058254,6.17987419335935,5.20557684911682,0.884610551949874,1.61766849947409,3.5334642953663,2.90925151881133,0,4.9772735491963,4.1889341362691,2.04365644166873,0.599075622529601,0,0.635351135365324,5.54225365797844,4.11750542536764,5.78010019719176,6.95297280769106,5.11430914660661,4.57133698031032,3.40706652442291,1.93494791315601,3.23458123586242,1.26361379216837,2.94618598241064,1.69156575851515,2.06911893990126,1.44049703844279,1.9591626318643,2.51735046859913,1.92170580427275,3.5606655332697,3.62184719034622,3.44908788692548,3.40390944302075,3.51902248327898,1.97276159184817,1.66828349535359,4.87553033131033,1.85203922767149,2.58744546864041,0,0.772043721344145,1.13665399758237,2.69263504296152,0.703578179943289,1.98068267607116,3.55117103377815,2.55793501271625,1.69693824176116,2.79040733700489,1.87791380979733,3.61972561338225,2.96207729844265,2.13417703302824,6.16122952548504,4.09359964790931,4.61055242111206,4.69722465661301,3.78521907415429,6.27718135513635,1.98251269790279,0.793351699990633,1.91959425481711,1.85789337488351,1.80414445850931,1.61346819698674,1.77902435075896,1.5218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|EntrezGene=22241
|HGNC=
|UniProt=O70405
|association_with_transcript=-18bp_to_ENSMUST00000031490_5end
|description=CAGE_peak_3_at_Ulk1_5end
|id=chr5:111239134..111239152,-
|ontology_enrichment_celltype=CL:0000117!5.71e-08!23;CL:0000337!5.71e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.47e-08,23;CL:0000337,5.47e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.96e-12!73;UBERON:0005743!3.96e-12!73;UBERON:0001049!5.01e-12!52;UBERON:0005068!5.01e-12!52;UBERON:0006241!5.01e-12!52;UBERON:0007135!5.01e-12!52;UBERON:0004111!1.95e-11!122;UBERON:0000025!2.48e-11!114;UBERON:0000073!4.64e-11!75;UBERON:0001016!4.64e-11!75;UBERON:0000955!2.73e-10!50;UBERON:0006238!2.73e-10!50;UBERON:0002616!5.17e-10!49;UBERON:0004121!7.32e-10!102;UBERON:0000924!7.32e-10!102;UBERON:0006601!7.32e-10!102;UBERON:0002346!8.99e-10!71;UBERON:0003075!8.99e-10!71;UBERON:0007284!8.99e-10!71;UBERON:0002020!4.37e-09!34;UBERON:0000033!4.09e-08!63;UBERON:0002791!1.85e-07!29;UBERON:0003528!1.85e-07!29;UBERON:0001893!1.85e-07!29;UBERON:0003080!3.15e-07!40;UBERON:0002780!9.04e-07!39;UBERON:0001890!9.04e-07!39;UBERON:0006240!9.04e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.37e-12,73;UBERON:0001049,4.82e-12,52;UBERON:0005068,4.82e-12,52;UBERON:0006241,4.82e-12,52;UBERON:0007135,4.82e-12,52;UBERON:0000073,1.04e-11,54;UBERON:0004111,2.00e-11,122;UBERON:0000025,2.43e-11,114;UBERON:0001016,4.37e-11,75;UBERON:0002346,1.91e-10,64;UBERON:0003075,1.91e-10,64;UBERON:0007284,1.91e-10,64;UBERON:0004121,3.14e-10,95;UBERON:0000924,3.14e-10,95;UBERON:0006601,3.14e-10,95;UBERON:0000955,4.39e-10,47;UBERON:0006238,4.39e-10,47;UBERON:0002616,8.31e-10,46;UBERON:0010314,1.73e-09,92;UBERON:0010371,2.58e-09,73;UBERON:0002020,4.29e-09,34;UBERON:0003528,1.83e-07,29;UBERON:0002791,1.83e-07,29;UBERON:0001893,1.83e-07,29;UBERON:0003080,3.12e-07,40;UBERON:0002780,8.96e-07,39;UBERON:0001890,8.96e-07,39;UBERON:0006240,8.96e-07,39
|phase1_expression=1.60148847104794,0.348975407639361,0.454999239389536,1.51232105653415,2.00358291978539,0.503637815735669,1.63528848416868,0.903863264091034,0.985521055061667,0.468129052643987,0.34243593645101,1.03703806693937,1.02720437958723,0.437102012094987,3.33109761815663,4.25198061518635,6.29605690315332,0.315462165358238,1.09691546884591,0.84877930359606,2.46625541438102,0.496454756004426,0,0.95995453676044,0.68822784320151,0.57423196411502,0.86152399231815,0.646413698057667,0.760093677825496,0.252030129759931,0.221730510655305,0.635030673459631,2.46025915033828,0,0.866554859253824,0,1.02084678131185,5.02237956884289,1.5626706890476,2.09409497589519,4.70585190424811,4.78131839470912,5.82612423637384,2.01434908760924,2.33166941804883,2.75320128242522,10.9534788208725,3.2703773457067,2.63623419281366,4.27745777963423,2.93971485413261,2.87505128729943,1.00669563634642,1.45072428402269,1.34437519656986,2.82985379639542,2.0057340795713,1.54701627683233,5.86717736492834,3.70293685490423,6.33831403506179,3.72728985276045,2.66788438833342,2.2497492932035,2.96659908770092,1.4209602298922,2.09720077362883,3.45796474789399,3.94020526772215,3.24014251996058,3.57552434297349,3.71346279724945,2.87129103237098,2.08234358665422,3.73797336971122,7.35375029288017,1.10115880999389,4.46905683298157,4.45458946443106,5.93488294785872,3.7509933876988,4.68822033501084,5.30447698102624,2.8138130501584,3.97275444219706,4.12480019663135,3.98640706237488,5.96478226640962,0.757261933331841,1.51143120213571,3.18850937571846,3.44169550792555,1.3599426674155,4.85732872474035,3.89865850468601,2.24013443548668,4.0728881838208,0.681721290312231,1.03914401841148,0.70667914902068,0.704217098883403,1.28326477414318,2.54805239706646,0,0.432982082022428,1.01343946190039,0,1.94112595522402,2.33044095282455,2.52351636410202,1.73485326766136,2.13125834818499,2.7673859670727,1.3565037649736,3.29248379979973,2.89033160058254,6.17987419335935,5.20557684911682,0.884610551949874,1.61766849947409,3.5334642953663,2.90925151881133,0,4.9772735491963,4.1889341362691,2.04365644166873,0.599075622529601,0,0.635351135365324,5.54225365797844,4.11750542536764,5.78010019719176,6.95297280769106,5.11430914660661,4.57133698031032,3.40706652442291,1.93494791315601,3.23458123586242,1.26361379216837,2.94618598241064,1.69156575851515,2.06911893990126,1.44049703844279,1.9591626318643,2.51735046859913,1.92170580427275,3.5606655332697,3.62184719034622,3.44908788692548,3.40390944302075,3.51902248327898,1.97276159184817,1.66828349535359,4.87553033131033,1.85203922767149,2.58744546864041,0,0.772043721344145,1.13665399758237,2.69263504296152,0.703578179943289,1.98068267607116,3.55117103377815,2.55793501271625,1.69693824176116,2.79040733700489,1.87791380979733,3.61972561338225,2.96207729844265,2.13417703302824,6.16122952548504,4.09359964790931,4.61055242111206,4.69722465661301,3.78521907415429,6.27718135513635,1.98251269790279,0.793351699990633,1.91959425481711,1.85789337488351,1.80414445850931,1.61346819698674,1.77902435075896,1.52180500890047,1.42358718463353,1.15289268306808,0.754005626400808,1.39269530428806,0.974820435595601,0,1.08069024937347,1.59313018603494,2.27601481143698,2.05647322697512,2.25415471346161,0.610953983535943,1.55161989734101,2.73529697572242,2.97211724484009,1.32849133181642,2.66897837330337,2.22114895059241,3.85388415213294,1.66845105716094,2.35870794135844,3.14806957338795,2.63718157805054,4.82354319504834,2.29163266603278,2.87696137450811,2.10775794807546,1.09824565275233,2.87536413054709,2.60498663367952,4.05648975048929,1.76805214562978,3.58794827043824,2.8946611281802,2.03228509183265,2.84237117655727,1.62964976442026,0.509235257325564,2.58159273117352,3.01511263395268,2.85652369063216,3.51240566144038,2.83743259391144,2.21464689648775,1.11618338060241,1.63863314715738,1.89953480052485,2.4590339958857,0,0,2.95058563811422,1.65562047782839,5.29816946959713,5.97779601620236,1.96721934452011,3.53459298086122,2.52406575533005,1.95219372148319,2.58508077279359,2.15071918157297,2.00518806674155,0.283076530788832,2.83367491172426,2.33804686329049,3.16230222357219,3.53453448063988,2.2710413633323,2.49291845134157,3.25773918707152,2.96946221350564,2.65490276679926,2.18502572539483,0.906970670894253,1.88605079755898,4.13422650033082,1.84461088766356,3.10113951801865,2.90826983582004,2.85197902707777,2.21225730555071,4.21674434299995,3.09406629744561,3.40439605753788,1.8006109403131,2.45781499187234,1.92903331528433,2.6601035046341,3.21063871683727,1.81003922662333,1.522324745573,4.92810586933792,6.56679419677843,2.64634077665954,3.13283880588812,2.74489525383039,2.89502039655148,1.07435109602823,3.93938159388147,1.7488850197791,5.93360966433631,1.70870880797853,1.44470807574256,0.740778109478847,2.82552685507037,2.87057878214153,3.43167259809784,1.35982743995084,1.81936888020755,1.10559979043539,7.63736494412091,2.53068794864908,2.23651413839534,1.29606408986162,0.836353184057875,0.87345025498471,1.34864346384821,2.64491058321075,1.04702376793612,1.94422459937689,1.86401793926078,1.12738587736838,3.13984746692355,2.31641886639937,3.50012139019286,1.16243841129958,1.68956125490778,3.40335992072686,4.1665403150064,2.41176492179135,1.69108884578204,1.72818003754719,2.8441000856536,2.63542779877213,1.1298205288131,1.16928740680016,2.14832034800978,0.79472541912506,1.32214994471966,1.77227432609493,1.71642964911851,1.37172251979,1.81487133246313,2.0466154955348,3.07877893249054,2.45441494581295,2.94749498699775,4.21773311410723,2.42227412845584,4.36500002546604,3.86379188064381,3.00291960721891,1.83151624267265,3.85863082342319,3.51100472824754,5.0827665835536,2.76195141904306,1.71868654031819,3.26521046453006,2.05524755931193,4.5323633843382,0.675022500231806,4.95353323546643,4.98456649882625,2.07104124700728,2.17953429926771,5.58634822761443,2.90247129782028,1.45864030240976,2.72497111416377,3.67687016900028,3.11145418922261,2.88449080134452,2.24643446714271,3.28506375292937,2.5347929989024,2.64076877940507,2.1537546718073,3.20125762024346,2.64203157195821,3.33405583898152,3.1288768005111,3.6652751888104,2.06042950401653,2.35518272215036,1.71434626192708,1.77475806159337,0.953744759789284,2.32554266611726,2.35273451038327,2.03075058940024,1.64635175585495,3.15683653725411,2.44447404922551,1.68342681497322,3.2031454893527,1.77308068276014,0.409231043169689,1.70430525304563,5.20847849649082,4.49659040288303,2.33931608445408,3.43793686477277,4.20834330551455,3.52946270591225,2.78241402744506
|short_description=p3@Ulk1
}}

Revision as of 05:56, 14 September 2013

Short description:p3@Ulk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ulk1_5end
Coexpression cluster:NA
Association with transcript: -18bp_to_ENSMUST00000031490_5end
EntrezGene:Ulk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ulk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H15.21
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D56.95
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G16.16
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D24.70
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G16.28
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D52.97
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A35.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G36.57
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H32.90
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H12.87
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.64
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I44.17
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G73.08
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.37
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.47e-0823
neuroblast (sensu Vertebrata)5.47e-0823

Uber anatomy
Ontology termp-valuen
central nervous system3.37e-1273
neural tube4.82e-1252
neural rod4.82e-1252
future spinal cord4.82e-1252
neural keel4.82e-1252
regional part of nervous system1.04e-1154
anatomical conduit2.00e-11122
tube2.43e-11114
nervous system4.37e-1175
neurectoderm1.91e-1064
neural plate1.91e-1064
presumptive neural plate1.91e-1064
ectoderm-derived structure3.14e-1095
ectoderm3.14e-1095
presumptive ectoderm3.14e-1095
brain4.39e-1047
future brain4.39e-1047
regional part of brain8.31e-1046
structure with developmental contribution from neural crest1.73e-0992
ecto-epithelium2.58e-0973
gray matter4.29e-0934
brain grey matter1.83e-0729
regional part of telencephalon1.83e-0729
telencephalon1.83e-0729
anterior neural tube3.12e-0740
regional part of forebrain8.96e-0739
forebrain8.96e-0739
future forebrain8.96e-0739







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