FFCP PHASE1:Hg19::chr8:93107660..93107673,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |||
|TSSclassifier=S | |||
|UniProt=E7EX23 | |||
|association_with_transcript=0bp_to_ENST00000518954_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_36_at_RUNX1T1_5end | |||
|id=chr8:93107660..93107673,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.70e-66;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-42!82;UBERON:0001049!8.64e-41!57;UBERON:0005068!8.64e-41!57;UBERON:0006241!8.64e-41!57;UBERON:0007135!8.64e-41!57;UBERON:0005743!2.32e-40!86;UBERON:0000073!1.20e-38!94;UBERON:0001016!1.20e-38!94;UBERON:0000955!5.62e-35!69;UBERON:0006238!5.62e-35!69;UBERON:0001869!2.96e-33!32;UBERON:0002616!1.36e-32!59;UBERON:0001893!4.00e-31!34;UBERON:0002619!1.06e-28!22;UBERON:0002780!1.32e-28!41;UBERON:0001890!1.32e-28!41;UBERON:0006240!1.32e-28!41;UBERON:0002791!2.35e-28!33;UBERON:0003080!7.68e-28!42;UBERON:0003075!1.90e-27!86;UBERON:0007284!1.90e-27!86;UBERON:0002020!1.94e-27!34;UBERON:0003528!1.94e-27!34;UBERON:0001950!8.88e-27!20;UBERON:0002346!5.74e-26!90;UBERON:0000956!4.65e-25!25;UBERON:0000203!4.65e-25!25;UBERON:0007023!2.09e-22!115;UBERON:0000033!8.57e-19!123;UBERON:0004121!1.43e-18!169;UBERON:0003056!5.24e-18!61;UBERON:0000924!5.56e-18!173;UBERON:0006601!5.56e-18!173;UBERON:0000153!1.21e-17!129;UBERON:0007811!1.21e-17!129;UBERON:0003076!5.48e-14!15;UBERON:0003057!5.48e-14!15;UBERON:0000025!8.26e-11!194;UBERON:0000369!6.21e-10!4;UBERON:0002435!6.21e-10!4;UBERON:0000204!6.21e-10!4;UBERON:0010082!6.21e-10!4;UBERON:0004733!2.55e-09!12;UBERON:0002028!2.55e-09!12;UBERON:0007277!2.55e-09!12;UBERON:0001871!8.45e-09!7;UBERON:0004732!1.41e-08!13;UBERON:0000349!1.79e-08!5;UBERON:0002021!1.88e-08!5;UBERON:0002680!2.32e-08!9;UBERON:0001895!2.32e-08!9;UBERON:0010092!2.32e-08!9;UBERON:0004111!2.64e-08!241;UBERON:0001872!3.82e-08!5;UBERON:0002420!1.08e-07!9;UBERON:0007245!1.08e-07!9;UBERON:0010009!1.08e-07!9;UBERON:0010011!1.08e-07!9;UBERON:0000454!1.08e-07!9;UBERON:0002037!1.42e-07!6;UBERON:0006215!1.42e-07!6;UBERON:0002240!5.66e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.64e-33;6!UBERON:0002680;1.26e-22;9!UBERON:0001895;1.26e-22;9!UBERON:0004733;3.63e-17;12!UBERON:0002028;3.63e-17;12!UBERON:0004732;6.65e-16;13!UBERON:0000955;3.27e-11;68!UBERON:0001016;7.24e-11;83!UBERON:0000922;7.75e-11;49!UBERON:0000073;1.52e-10;53!UBERON:0002616;1.52e-10;53!UBERON:0001950;3.25e-10;20!UBERON:0002619;2.21e-09;22!UBERON:0002114;1.12e-08;2!UBERON:0000956;2.28e-08;25!UBERON:0000203;2.28e-08;25!UBERON:0001017;6.08e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.64e-33,6;UBERON:0006215,1.64e-33,6;UBERON:0002680,1.26e-22,9;UBERON:0001895,1.26e-22,9;UBERON:0010092,1.26e-22,9;UBERON:0004733,3.63e-17,12;UBERON:0002028,3.63e-17,12;UBERON:0007277,3.63e-17,12;UBERON:0001017,8.70e-17,81;UBERON:0004732,6.65e-16,13;UBERON:0000955,2.47e-15,68;UBERON:0006238,2.47e-15,68;UBERON:0001016,3.95e-15,89;UBERON:0000073,9.38e-15,53;UBERON:0002616,9.38e-15,53;UBERON:0001049,5.58e-14,56;UBERON:0005068,5.58e-14,56;UBERON:0006241,5.58e-14,56;UBERON:0007135,5.58e-14,56;UBERON:0003076,7.03e-14,15;UBERON:0003057,7.03e-14,15;UBERON:0001950,3.35e-10,20;UBERON:0003075,1.34e-09,82;UBERON:0007284,1.34e-09,82;UBERON:0002619,2.28e-09,22;UBERON:0002346,3.73e-09,86;UBERON:0002114,1.12e-08,2;UBERON:0000956,2.34e-08,25;UBERON:0000203,2.34e-08,25;UBERON:0004121,7.05e-08,171;UBERON:0000924,7.05e-08,171;UBERON:0006601,7.05e-08,171;UBERON:0011216,1.33e-07,223;UBERON:0010371,1.43e-07,104 | |||
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|short_description=p36@RUNX1T1 | |||
}} |
Revision as of 06:22, 14 September 2013
Short description: | p36@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_36_at_RUNX1T1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000518954_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | E7EX23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.64e-33 | 6 |
rhombic lip | 1.64e-33 | 6 |
regional part of metencephalon | 1.26e-22 | 9 |
metencephalon | 1.26e-22 | 9 |
future metencephalon | 1.26e-22 | 9 |
segmental subdivision of hindbrain | 3.63e-17 | 12 |
hindbrain | 3.63e-17 | 12 |
presumptive hindbrain | 3.63e-17 | 12 |
central nervous system | 8.70e-17 | 81 |
segmental subdivision of nervous system | 6.65e-16 | 13 |
brain | 2.47e-15 | 68 |
future brain | 2.47e-15 | 68 |
nervous system | 3.95e-15 | 89 |
regional part of nervous system | 9.38e-15 | 53 |
regional part of brain | 9.38e-15 | 53 |
neural tube | 5.58e-14 | 56 |
neural rod | 5.58e-14 | 56 |
future spinal cord | 5.58e-14 | 56 |
neural keel | 5.58e-14 | 56 |
posterior neural tube | 7.03e-14 | 15 |
chordal neural plate | 7.03e-14 | 15 |
neocortex | 3.35e-10 | 20 |
neural plate | 1.34e-09 | 82 |
presumptive neural plate | 1.34e-09 | 82 |
regional part of cerebral cortex | 2.28e-09 | 22 |
neurectoderm | 3.73e-09 | 86 |
duodenum | 1.12e-08 | 2 |
cerebral cortex | 2.34e-08 | 25 |
pallium | 2.34e-08 | 25 |
ectoderm-derived structure | 7.05e-08 | 171 |
ectoderm | 7.05e-08 | 171 |
presumptive ectoderm | 7.05e-08 | 171 |
organ system subdivision | 1.33e-07 | 223 |
ecto-epithelium | 1.43e-07 | 104 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.