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FFCP PHASE1:Mm9::chr5:138721766..138721791,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=50878|HGNC=|MCL_coexpression_id=0|UniProt=E0CXH6,O70576,Q3TYZ1|association_with_transcript=0bp_to_ENSMUST00000161691,ENSMUST00000162245,uc009afm.1_5end|description=CAGE_peak_2_at_Stag3_5end|id=chr5:138721766..138721791,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!6.70e-09!18;UBERON:0005564!6.70e-09!18;UBERON:0003133!1.06e-08!24;UBERON:0004176!2.67e-08!17;UBERON:0009196!2.67e-08!17;UBERON:0009117!2.67e-08!17;UBERON:0000473!7.74e-08!14;UBERON:0003135!2.13e-07!15;UBERON:0005156!4.28e-07!26;UBERON:0000990!4.28e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.84e-18,18;UBERON:0005564,2.84e-18,18;UBERON:0004176,6.35e-17,17;UBERON:0009196,6.35e-17,17;UBERON:0009117,6.35e-17,17;UBERON:0003133,3.11e-16,24;UBERON:0000473,1.12e-15,14;UBERON:0005156,1.39e-14,26;UBERON:0000990,1.39e-14,26;UBERON:0003135,2.16e-14,15;UBERON:0003101,2.85e-13,16;UBERON:0000079,2.85e-13,16;UBERON:0002323,1.80e-12,37;UBERON:0004458,1.80e-12,37;UBERON:0003886,5.45e-12,38;UBERON:0002553,1.56e-11,39;UBERON:0000926,3.16e-10,120;UBERON:0004120,3.16e-10,120;UBERON:0006603,3.16e-10,120;UBERON:0000077,7.04e-08,35;UBERON:0004177,8.12e-08,29;UBERON:0005057,8.12e-08,29|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.171217968225505,0,0,0,0.333109761815663,0.809901069559304,0,0.315462165358238,0.411343300817216,0.42438965179803,36.8237446354132,2.28369187762036,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0.635030673459631,0,0,0,0,0,1.25559489221072,2.3440060335714,7.32933241563318,1.17646297606203,2.73218193983378,8.25367600152961,0,0.101376931219515,0,0.782391344348039,0,0,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,1.03134418455488,0,1.05798195854407,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.135005938331691,0.210324961351382,1.14260393761521,0.883474163806454,0.489963196859816,0.383381884072945,0,0,0.127687338085188,0,1.18697658957174,0.182975287204819,1.04182674111352,0,0,0,0.589257170947335,0.996601765593721,0.372798891650601,0.227178579999552,0.529000920747499,0,0,0,0,0,0,3.08977724289854,0,0,0,0.281686839553361,1.28326477414318,5.09610479413291,0,0,0,0,4.22480354960522,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.125666591329675,0.494389935468748,0,0,0.161766849947409,1.32504911076236,1.45462575940567,0,0,0.209446706813455,0.255457055208591,0.359445373517761,0.599902730993408,0.762421362438388,0,0,0.376963056338593,0,0.255715457330331,0,0,1.12023300235348,0.497627882440372,0.252722758433675,0,0.390361328888111,0.459804208866946,0.540186389416048,0.452114453507145,1.08858398642125,1.5373646434182,0.937017245597288,0.776110112217047,0,0.567318240503458,0.879755620819744,0.43839146485515,1.39023624612799,0.696504333044333,1.02891068203972,3.38358253591438,0.702213187313235,0.772043721344145,0.568326998791185,0.414251545071004,0.234526059981096,0,0.473489471170421,0.393528463494808,0.308534225774757,0,0,0.233530684734339,0.329119699826961,0.656669856316381,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.205809224758569,0,0,0.853153002140936,0.696710015581316,0.644337306610467,0.201683524623343,0.444756087689741,0.570676878337677,0,0,0,0.596869416123452,0.19496408711912,0.898819408654221,0.432276099749388,0,0.189667900953082,0.571242563048644,1.1270773567308,0,0.387904974335251,0.140271639780637,0.126473074248515,0,0,0,0,0.667380422864376,1.17935397067922,0.674586337154561,0.608580364165509,0.72353147925725,0,0.575392274901621,0.810676133875177,0.823684239564244,0,0.372140947668503,0,0.252578877947112,0,0.482443521363367,0,0.568474235311454,0.651859905768103,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0,0.630540576424764,0.664394068946325,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0.54390568381871,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,1.21443210502468,0.292255857911312,0,0,0.141940085208269,2.13678724400706,2.76907830901079,0,0,0.242780636154981,0.906970670894253,1.13163047853539,0,0.307435147943927,0.775284879504663,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0.608929898229199,1.87737366450968,1.27099242518292,0,0.32977250588296,0.484393280087717,0.241251699712623,0.238744688006273,0,0.291480836629851,0,0.512612642393558,0.412773735926445,1.11116716421827,3.76736914009382,1.23024804948923,2.0590035588587,0.339956859987711,0.559805809294632,0.552799895217695,0,0.632671987162271,1.01659733563424,0.216010681643603,0.627264888043406,1.09181281873089,0.269728692769641,0,0,0.129614973291793,0,237.314727186044,3.58839710505549,3.47462829959905,8.36140109879405,8.91202781996345,7.43406952159424,3.52071715937262,7.16124116641726,29.360616439199,110.887111459137,141.998793085128,0,0.202725215290164,0.513554785824136,0.909445760844565,1.9692936523423,0.596044064343795,2.16351809135944,1.18151621739662,2.3222283488074,2.51482461961499,1.41156659191577,1.36441033035653,1.73181314952593,1.63627663054197,0.226730383615211,0.665957860122194,0.448569283047378,0.167884616364078,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0.798049746802062,1.02440163452481,0.729320151204882,0,0,0.666740183404846,1.03017528619447,0.64183841918363,0.252697211763798,0.760437899670719,0.754505365544305,0.749132059759059,0.640251524048693,0.574354689556133,0.952587382566147,0.695305955669133,0.192909220463705,0.824171801606613,1.61918812147837,0,1.24233064311536,0.476872379894642,0.436039249896986,0.752875043322645,0.338458431566706,0.73171189149109,1.8414879800649,0.407412341537585,0,0.474540072496697,0.689531376628944,1.22769312950907,0.464810523557898,0,0,0,0.429742108096597,0.191288332068843,0,0.695603506861264|short_description=p2@Stag3}}
|EntrezGene=50878
|HGNC=
|MCL_coexpression_id=0
|UniProt=E0CXH6,O70576,Q3TYZ1
|association_with_transcript=0bp_to_ENSMUST00000161691,ENSMUST00000162245,uc009afm.1_5end
|description=CAGE_peak_2_at_Stag3_5end
|id=chr5:138721766..138721791,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000991!6.70e-09!18;UBERON:0005564!6.70e-09!18;UBERON:0003133!1.06e-08!24;UBERON:0004176!2.67e-08!17;UBERON:0009196!2.67e-08!17;UBERON:0009117!2.67e-08!17;UBERON:0000473!7.74e-08!14;UBERON:0003135!2.13e-07!15;UBERON:0005156!4.28e-07!26;UBERON:0000990!4.28e-07!26
|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.84e-18,18;UBERON:0005564,2.84e-18,18;UBERON:0004176,6.35e-17,17;UBERON:0009196,6.35e-17,17;UBERON:0009117,6.35e-17,17;UBERON:0003133,3.11e-16,24;UBERON:0000473,1.12e-15,14;UBERON:0005156,1.39e-14,26;UBERON:0000990,1.39e-14,26;UBERON:0003135,2.16e-14,15;UBERON:0003101,2.85e-13,16;UBERON:0000079,2.85e-13,16;UBERON:0002323,1.80e-12,37;UBERON:0004458,1.80e-12,37;UBERON:0003886,5.45e-12,38;UBERON:0002553,1.56e-11,39;UBERON:0000926,3.16e-10,120;UBERON:0004120,3.16e-10,120;UBERON:0006603,3.16e-10,120;UBERON:0000077,7.04e-08,35;UBERON:0004177,8.12e-08,29;UBERON:0005057,8.12e-08,29
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.171217968225505,0,0,0,0.333109761815663,0.809901069559304,0,0.315462165358238,0.411343300817216,0.42438965179803,36.8237446354132,2.28369187762036,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0.635030673459631,0,0,0,0,0,1.25559489221072,2.3440060335714,7.32933241563318,1.17646297606203,2.73218193983378,8.25367600152961,0,0.101376931219515,0,0.782391344348039,0,0,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,1.03134418455488,0,1.05798195854407,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.135005938331691,0.210324961351382,1.14260393761521,0.883474163806454,0.489963196859816,0.383381884072945,0,0,0.127687338085188,0,1.18697658957174,0.182975287204819,1.04182674111352,0,0,0,0.589257170947335,0.996601765593721,0.372798891650601,0.227178579999552,0.529000920747499,0,0,0,0,0,0,3.08977724289854,0,0,0,0.281686839553361,1.28326477414318,5.09610479413291,0,0,0,0,4.22480354960522,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.125666591329675,0.494389935468748,0,0,0.161766849947409,1.32504911076236,1.45462575940567,0,0,0.209446706813455,0.255457055208591,0.359445373517761,0.599902730993408,0.762421362438388,0,0,0.376963056338593,0,0.255715457330331,0,0,1.12023300235348,0.497627882440372,0.252722758433675,0,0.390361328888111,0.459804208866946,0.540186389416048,0.452114453507145,1.08858398642125,1.5373646434182,0.937017245597288,0.776110112217047,0,0.567318240503458,0.879755620819744,0.43839146485515,1.39023624612799,0.696504333044333,1.02891068203972,3.38358253591438,0.702213187313235,0.772043721344145,0.568326998791185,0.414251545071004,0.234526059981096,0,0.473489471170421,0.393528463494808,0.308534225774757,0,0,0.233530684734339,0.329119699826961,0.656669856316381,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.205809224758569,0,0,0.853153002140936,0.696710015581316,0.644337306610467,0.201683524623343,0.444756087689741,0.570676878337677,0,0,0,0.596869416123452,0.19496408711912,0.898819408654221,0.432276099749388,0,0.189667900953082,0.571242563048644,1.1270773567308,0,0.387904974335251,0.140271639780637,0.126473074248515,0,0,0,0,0.667380422864376,1.17935397067922,0.674586337154561,0.608580364165509,0.72353147925725,0,0.575392274901621,0.810676133875177,0.823684239564244,0,0.372140947668503,0,0.252578877947112,0,0.482443521363367,0,0.568474235311454,0.651859905768103,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0,0.630540576424764,0.664394068946325,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0.54390568381871,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,1.21443210502468,0.292255857911312,0,0,0.141940085208269,2.13678724400706,2.76907830901079,0,0,0.242780636154981,0.906970670894253,1.13163047853539,0,0.307435147943927,0.775284879504663,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0.608929898229199,1.87737366450968,1.27099242518292,0,0.32977250588296,0.484393280087717,0.241251699712623,0.238744688006273,0,0.291480836629851,0,0.512612642393558,0.412773735926445,1.11116716421827,3.76736914009382,1.23024804948923,2.0590035588587,0.339956859987711,0.559805809294632,0.552799895217695,0,0.632671987162271,1.01659733563424,0.216010681643603,0.627264888043406,1.09181281873089,0.269728692769641,0,0,0.129614973291793,0,237.314727186044,3.58839710505549,3.47462829959905,8.36140109879405,8.91202781996345,7.43406952159424,3.52071715937262,7.16124116641726,29.360616439199,110.887111459137,141.998793085128,0,0.202725215290164,0.513554785824136,0.909445760844565,1.9692936523423,0.596044064343795,2.16351809135944,1.18151621739662,2.3222283488074,2.51482461961499,1.41156659191577,1.36441033035653,1.73181314952593,1.63627663054197,0.226730383615211,0.665957860122194,0.448569283047378,0.167884616364078,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0.798049746802062,1.02440163452481,0.729320151204882,0,0,0.666740183404846,1.03017528619447,0.64183841918363,0.252697211763798,0.760437899670719,0.754505365544305,0.749132059759059,0.640251524048693,0.574354689556133,0.952587382566147,0.695305955669133,0.192909220463705,0.824171801606613,1.61918812147837,0,1.24233064311536,0.476872379894642,0.436039249896986,0.752875043322645,0.338458431566706,0.73171189149109,1.8414879800649,0.407412341537585,0,0.474540072496697,0.689531376628944,1.22769312950907,0.464810523557898,0,0,0,0.429742108096597,0.191288332068843,0,0.695603506861264
|short_description=p2@Stag3
}}

Revision as of 06:50, 14 September 2013

Short description:p2@Stag3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Stag3_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000161691, ENSMUST00000162245, uc009afm.1_5end
EntrezGene:Stag3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Stag3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A336.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5237.31
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G58.36
testis, embryo E17.CNhs11029.486-18I58.91
testis, embryo E18.CNhs11027.503-18G57.43
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I47.16
testis, neonate N10.CNhs11204.763-44D929.36
testis, neonate N20.CNhs11110.839-18H3110.89
testis, neonate N30.CNhs11130.1391-42E2142.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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