FFCP PHASE1:Mm9::chr5:149211439..149211448,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=11987|HGNC=|UniProt=Q09143,Q3UGD6|association_with_transcript=31bp_to_ENSMUST00000048116,NM_007513,uc009aos.2_5end|description=CAGE_peak_6_at_Slc7a1_5end|id=chr5:149211439..149211448,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,4.86e-08,25;CL:0000838,8.01e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.640595388419176,0.348975407639361,0,0.30246421130683,0.500895729946347,0.503637815735669,0.934450562382103,1.03298658753261,4.22366166455,3.97909694747389,2.05461561870606,2.55270908785077,0.342401459862411,2.09808965805594,2.6648780945253,2.63217847606774,1.39912375625629,2.05050407482854,0.685572168028694,0.42438965179803,0.595303031057488,1.09220046320974,1.82839852397255,0.799962113967033,0.45881856213434,0,1.29228598847722,0.646413698057667,0.190023419456374,0,1.10865255327652,3.17515336729816,3.07532393792285,0,0.866554859253824,0.664938581433969,0.816677425049476,0.418531630736908,0,0,0,0,0,0.503587271902309,0.608261587317087,0.734187008646726,0,0.65407546914134,0.439372365468944,0.777719596297134,1.1198913730029,1.43752564364972,2.01339127269284,0.725362142011344,1.34437519656986,2.05807548828758,1.14613375975503,1.03134418455488,1.21389876515759,0.528990979272033,0,0,0,0,0.988866362566974,0,0.898800331555214,1.15265491596466,1.14058573539325,0.540023753326763,0.630974884054146,1.42825492201902,0.883474163806454,0.857435594504678,0.575072826109418,0.919218786610021,1.10115880999389,0.893811366596314,1.68967186581868,0.527545150920775,0.640413505216868,0.52091337055676,2.23346399201105,1.12552522006336,1.06958773443767,3.24091444021034,1.56608848879013,0.931997229126503,1.21161909333094,0.906858721281426,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0.170430322578058,0.779358013808606,0,0,0,2.54805239706646,0,0.865964164044856,0.760079596425296,0,0.5709193985953,0,2.3750742250372,1.73485326766136,2.13125834818499,3.22861696158482,1.05505848386836,1.29347577849275,1.88499886994513,0.494389935468748,0.289198713839823,1.76922110389975,0.970601099684455,1.76673214768315,0.969750506270444,0,1.17112318804619,0.41889341362691,0.766371165625774,2.27648736561249,0,0.889491589511453,0.449371918214468,0.915001205637253,1.00523481690292,1.56441888173049,1.79000820131231,1.0389402227978,1.29793010454206,0.712875546952214,0.622034853050465,1.51633655060205,0.631325567659422,0.650602214813519,0.459804208866946,0.540186389416048,0.753524089178575,1.08858398642125,1.15302348256365,0.468508622798644,0.517406741478031,0.215567992932842,0.756424320671277,0.175951124163949,0,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,0.51469581422943,0.568326998791185,1.24275463521301,0.703578179943289,0.540186184383045,1.18372367792605,0.393528463494808,0.154267112887378,0.930135779001631,0.804820204198858,0.467061369468678,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0.402619256281115,0.210289948564127,2.26390147234426,0.330418782983798,0.528901133327089,0.853153002140936,0.464473343720877,0.902072229254653,0.80673409849337,0.667134131534611,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.38992817423824,0,0.648414149624083,0.995706366271836,1.13800740571849,0.799739588268102,0,0.407302655690628,0.775809948670503,0.420814919341911,0.379419222745544,0,0.470996183524124,0.370191491765402,0,0.83422552858047,1.17935397067922,0.899448449539415,0.811440485554012,1.68824011826692,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0.488894929326078,1.35796068620151,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0.221464689648775,0.956728611944923,0.327726629431476,0.863424909329478,0.867894351489069,0,0,1.47529281905711,1.10374698521893,0.642202359951168,1.40654023910644,0.655739781506702,0.504941854408746,0.631016438832513,1.56175497718655,0.646270193198397,0.477937595905104,0.222798674082394,1.41538265394416,1.21443210502468,0,0,0.642642632843614,0.283880170416537,0.35613120733451,0.325773918707152,0.494910368917606,2.65490276679926,0.485561272309963,0.604647113929502,1.50884063804718,2.06711325016541,1.22974059177571,1.29214146584111,1.81766864738753,2.85197902707777,1.8962205476149,1.05418608574999,1.03135543248187,1.36175842301515,0.540183282093931,0.388076051348264,1.07168517515796,0.532020700926821,1.07021290561242,0.164549020602121,0.913394847343798,0.469343416127421,2.33015277950202,1.7642271844397,0.32977250588296,0.322928853391811,0.965006798850494,0.716234064018819,0.984845398470368,0.291480836629851,1.29797711407357,1.19609616558497,0.412773735926445,0.740778109478847,1.13021074202815,1.36694227721025,0.457556346413045,1.5298058699447,1.25956307091292,1.79659965945751,0,0.474503990371703,1.42323626988794,0.86404272657441,0.418176592028937,0.218362563746178,0.674321731924103,1.23980183588004,1.30877970992015,1.03691978633434,0,0.56369293868419,0.897099276263873,0.330916980914195,0.388902376688095,0.904118764344118,0.844780627453891,1.05621514781179,1.3020438484395,2.09718688851422,0.966336483304024,0.864090018773596,0,0.810900861160657,0.410843828659309,0.909445760844565,0.537080087002444,1.39076948346885,1.08175904567972,1.03382669022204,0.504832249740738,0.838274873204998,0.705783295957884,0.194915761479505,1.34696578296461,0.467507608726276,0.453460767230423,0.443971906748129,0.269141569828427,0.671538465456314,0.772758376128762,0.375364950902364,0.915758121336325,1.07184189539533,2.00628841614145,1.12950368523413,0.460325236507177,0.572895513439397,2.06223818812425,2.74033007908257,1.5107877947794,0,0.900642406448441,0.906284817968409,1.03552062350364,0.103787347584177,0,0.512200817262403,0.729320151204882,0.209613162627982,0.551530525350042,0.666740183404846,0.618105171716683,0.962757628775446,0.505394423527595,0.760437899670719,0.565879024158229,0.37456602987953,0.576226371643824,0.918967503289812,0.476293691283074,0.463537303779422,1.15745532278223,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.0941093804153306,0.507687647350059,0.182927972872773,0.263069711437843,0.407412341537585,0,0.711810108745045,0.985044823755635,0.409231043169689,0.619747364743864,0.578719832943424,0.749431733813838,0.233931608445408,1.28922632428979,0.57386499620653,0.661774257358546,0.695603506861264|short_description=p6@Slc7a1}} | ||
|EntrezGene=11987 | |||
|HGNC= | |||
|UniProt=Q09143,Q3UGD6 | |||
|association_with_transcript=31bp_to_ENSMUST00000048116,NM_007513,uc009aos.2_5end | |||
|description=CAGE_peak_6_at_Slc7a1_5end | |||
|id=chr5:149211439..149211448,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.86e-08,25;CL:0000838,8.01e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.640595388419176,0.348975407639361,0,0.30246421130683,0.500895729946347,0.503637815735669,0.934450562382103,1.03298658753261,4.22366166455,3.97909694747389,2.05461561870606,2.55270908785077,0.342401459862411,2.09808965805594,2.6648780945253,2.63217847606774,1.39912375625629,2.05050407482854,0.685572168028694,0.42438965179803,0.595303031057488,1.09220046320974,1.82839852397255,0.799962113967033,0.45881856213434,0,1.29228598847722,0.646413698057667,0.190023419456374,0,1.10865255327652,3.17515336729816,3.07532393792285,0,0.866554859253824,0.664938581433969,0.816677425049476,0.418531630736908,0,0,0,0,0,0.503587271902309,0.608261587317087,0.734187008646726,0,0.65407546914134,0.439372365468944,0.777719596297134,1.1198913730029,1.43752564364972,2.01339127269284,0.725362142011344,1.34437519656986,2.05807548828758,1.14613375975503,1.03134418455488,1.21389876515759,0.528990979272033,0,0,0,0,0.988866362566974,0,0.898800331555214,1.15265491596466,1.14058573539325,0.540023753326763,0.630974884054146,1.42825492201902,0.883474163806454,0.857435594504678,0.575072826109418,0.919218786610021,1.10115880999389,0.893811366596314,1.68967186581868,0.527545150920775,0.640413505216868,0.52091337055676,2.23346399201105,1.12552522006336,1.06958773443767,3.24091444021034,1.56608848879013,0.931997229126503,1.21161909333094,0.906858721281426,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0.170430322578058,0.779358013808606,0,0,0,2.54805239706646,0,0.865964164044856,0.760079596425296,0,0.5709193985953,0,2.3750742250372,1.73485326766136,2.13125834818499,3.22861696158482,1.05505848386836,1.29347577849275,1.88499886994513,0.494389935468748,0.289198713839823,1.76922110389975,0.970601099684455,1.76673214768315,0.969750506270444,0,1.17112318804619,0.41889341362691,0.766371165625774,2.27648736561249,0,0.889491589511453,0.449371918214468,0.915001205637253,1.00523481690292,1.56441888173049,1.79000820131231,1.0389402227978,1.29793010454206,0.712875546952214,0.622034853050465,1.51633655060205,0.631325567659422,0.650602214813519,0.459804208866946,0.540186389416048,0.753524089178575,1.08858398642125,1.15302348256365,0.468508622798644,0.517406741478031,0.215567992932842,0.756424320671277,0.175951124163949,0,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,0.51469581422943,0.568326998791185,1.24275463521301,0.703578179943289,0.540186184383045,1.18372367792605,0.393528463494808,0.154267112887378,0.930135779001631,0.804820204198858,0.467061369468678,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0.402619256281115,0.210289948564127,2.26390147234426,0.330418782983798,0.528901133327089,0.853153002140936,0.464473343720877,0.902072229254653,0.80673409849337,0.667134131534611,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.38992817423824,0,0.648414149624083,0.995706366271836,1.13800740571849,0.799739588268102,0,0.407302655690628,0.775809948670503,0.420814919341911,0.379419222745544,0,0.470996183524124,0.370191491765402,0,0.83422552858047,1.17935397067922,0.899448449539415,0.811440485554012,1.68824011826692,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0.488894929326078,1.35796068620151,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0.221464689648775,0.956728611944923,0.327726629431476,0.863424909329478,0.867894351489069,0,0,1.47529281905711,1.10374698521893,0.642202359951168,1.40654023910644,0.655739781506702,0.504941854408746,0.631016438832513,1.56175497718655,0.646270193198397,0.477937595905104,0.222798674082394,1.41538265394416,1.21443210502468,0,0,0.642642632843614,0.283880170416537,0.35613120733451,0.325773918707152,0.494910368917606,2.65490276679926,0.485561272309963,0.604647113929502,1.50884063804718,2.06711325016541,1.22974059177571,1.29214146584111,1.81766864738753,2.85197902707777,1.8962205476149,1.05418608574999,1.03135543248187,1.36175842301515,0.540183282093931,0.388076051348264,1.07168517515796,0.532020700926821,1.07021290561242,0.164549020602121,0.913394847343798,0.469343416127421,2.33015277950202,1.7642271844397,0.32977250588296,0.322928853391811,0.965006798850494,0.716234064018819,0.984845398470368,0.291480836629851,1.29797711407357,1.19609616558497,0.412773735926445,0.740778109478847,1.13021074202815,1.36694227721025,0.457556346413045,1.5298058699447,1.25956307091292,1.79659965945751,0,0.474503990371703,1.42323626988794,0.86404272657441,0.418176592028937,0.218362563746178,0.674321731924103,1.23980183588004,1.30877970992015,1.03691978633434,0,0.56369293868419,0.897099276263873,0.330916980914195,0.388902376688095,0.904118764344118,0.844780627453891,1.05621514781179,1.3020438484395,2.09718688851422,0.966336483304024,0.864090018773596,0,0.810900861160657,0.410843828659309,0.909445760844565,0.537080087002444,1.39076948346885,1.08175904567972,1.03382669022204,0.504832249740738,0.838274873204998,0.705783295957884,0.194915761479505,1.34696578296461,0.467507608726276,0.453460767230423,0.443971906748129,0.269141569828427,0.671538465456314,0.772758376128762,0.375364950902364,0.915758121336325,1.07184189539533,2.00628841614145,1.12950368523413,0.460325236507177,0.572895513439397,2.06223818812425,2.74033007908257,1.5107877947794,0,0.900642406448441,0.906284817968409,1.03552062350364,0.103787347584177,0,0.512200817262403,0.729320151204882,0.209613162627982,0.551530525350042,0.666740183404846,0.618105171716683,0.962757628775446,0.505394423527595,0.760437899670719,0.565879024158229,0.37456602987953,0.576226371643824,0.918967503289812,0.476293691283074,0.463537303779422,1.15745532278223,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.0941093804153306,0.507687647350059,0.182927972872773,0.263069711437843,0.407412341537585,0,0.711810108745045,0.985044823755635,0.409231043169689,0.619747364743864,0.578719832943424,0.749431733813838,0.233931608445408,1.28922632428979,0.57386499620653,0.661774257358546,0.695603506861264 | |||
|short_description=p6@Slc7a1 | |||
}} | |||
Revision as of 07:05, 14 September 2013
| Short description: | p6@Slc7a1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Slc7a1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 31bp_to_ENSMUST00000048116, NM_007513, uc009aos.2_5end |
| EntrezGene: | Slc7a1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic lineage restricted progenitor cell | 4.86e-08 | 25 |
| lymphoid lineage restricted progenitor cell | 8.01e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
