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FFCP PHASE1:Mm9::chr5:53060697..53060716,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=175|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:53060697..53060716,-|id=chr5:53060697..53060716,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.36e-12,6;CL:0000677,2.36e-12,6;CL:0000584,2.36e-12,6;CL:0000223,2.03e-11,20;CL:0002563,8.97e-11,9;CL:0002251,8.97e-11,9;CL:0000075,1.75e-10,7;CL:0000066,3.31e-10,25;CL:0002076,6.65e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.08e-15!130;UBERON:0000925!4.08e-15!130;UBERON:0006595!4.08e-15!130;UBERON:0001007!5.13e-15!128;UBERON:0001555!5.13e-15!128;UBERON:0007026!5.13e-15!128;UBERON:0004921!4.58e-14!126;UBERON:0004185!4.58e-14!126;UBERON:0000160!1.37e-11!43;UBERON:0005409!3.40e-10!59;UBERON:0002107!1.39e-09!22;UBERON:0007499!1.39e-09!22;UBERON:0006925!1.39e-09!22;UBERON:0009497!1.39e-09!22;UBERON:0000015!1.39e-09!22;UBERON:0002423!1.39e-09!22;UBERON:0006235!1.39e-09!22;UBERON:0008835!1.39e-09!22;UBERON:0003894!1.39e-09!22;UBERON:0004161!1.39e-09!22;UBERON:0008836!1.39e-09!22;UBERON:0000344!2.31e-09!15;UBERON:0009854!8.14e-09!23;UBERON:0009856!8.14e-09!23;UBERON:0005911!1.67e-08!69;UBERON:0002365!1.81e-08!25;UBERON:0002330!1.81e-08!25;UBERON:0001242!2.41e-08!13;UBERON:0000060!2.41e-08!13;UBERON:0001262!2.41e-08!13;UBERON:0004786!2.41e-08!13;UBERON:0003929!1.29e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.32e-20,31;UBERON:0001007,1.05e-15,116;UBERON:0001555,1.05e-15,116;UBERON:0007026,1.05e-15,116;UBERON:0004119,2.66e-15,118;UBERON:0000925,2.66e-15,118;UBERON:0006595,2.66e-15,118;UBERON:0002107,3.99e-15,22;UBERON:0007499,3.99e-15,22;UBERON:0006925,3.99e-15,22;UBERON:0009497,3.99e-15,22;UBERON:0000015,3.99e-15,22;UBERON:0002423,3.99e-15,22;UBERON:0006235,3.99e-15,22;UBERON:0008835,3.99e-15,22;UBERON:0003894,3.99e-15,22;UBERON:0004161,3.99e-15,22;UBERON:0008836,3.99e-15,22;UBERON:0004921,5.14e-15,114;UBERON:0009854,2.50e-14,23;UBERON:0009856,2.50e-14,23;UBERON:0005409,2.02e-13,47;UBERON:0003929,4.48e-13,55;UBERON:0002365,6.29e-13,25;UBERON:0002330,6.29e-13,25;UBERON:0000344,4.86e-12,15;UBERON:0001242,1.11e-11,13;UBERON:0001262,1.11e-11,13;UBERON:0004786,1.11e-11,13;UBERON:0003350,8.97e-11,9;UBERON:0004808,8.97e-11,9;UBERON:0001277,8.97e-11,9;UBERON:0000490,4.94e-10,66;UBERON:0005911,2.25e-09,69;UBERON:0000485,1.28e-08,11;UBERON:0005172,5.25e-08,49;UBERON:0005173,5.25e-08,49;UBERON:0002417,5.25e-08,49;UBERON:0000916,5.25e-08,49;UBERON:0004923,8.59e-07,24|phase1_expression=0,2.09385244583617,1.81999695755814,3.62957053568196,5.50985302940982,1.34303417529512,1.16806320297763,0,0.140788722151667,0,0.171217968225505,0,0,0.0874204024189974,0.666219523631325,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,1.11994695955385,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,0.570070258369122,0.252030129759931,1.10865255327652,0,0,0,0.866554859253824,0.166234645358492,2.04169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.45839474333043,0,0,0,0,0,0,2.58127163094416,0.679971333707751,13.4925797909454,9.09686984426737,8.51251085484938,1.26399978118577,0,0,0,0,0,2.54805239706646,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0.125666591329675,0.988779870937496,0.289198713839823,0,0,0.220841518460394,0,0,0,0,1.27728527604296,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0,0,6.52369753248069,0,0,0,0,0,0,0,2.06962696591213,0.215567992932842,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,0,0,4.62586296177317,4.23120906661671,0,0,0,0.605050573870028,0.444756087689741,0.380451252225118,3.32170343081158,0.329397909448022,1.50801125280162,1.59165177632921,1.36474860983384,1.79763881730844,3.02593269824572,3.58454291857861,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.505892296994058,1.32849133181642,1.255989822731,1.48076596706161,2.96452627087149,0,0.196558995113203,0.224862112384854,0.202860121388503,1.4470629585145,0.50925170356284,1.72617682470486,0.810676133875177,1.37280706594041,0,2.23284568601102,5.30464044294753,5.80931419278357,8.25228102200796,11.5786445127208,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0.472905432318573,0.221464689648775,0.159454768657487,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0.922305443831782,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0.63549621259146,0,0,0,0,0.119372344003136,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0.169978429993855,0,0,0.954670618015114,0.158167996790568,0.609958401380546,0.108005340821801,0.209088296014469,0,0.539457385539283,0.991841468704031,0,2.72191443912765,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0.5208175393758,0,0,0,0.632022241256357,0,0.205421914329655,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0.512200817262403,0.486213434136588,0,0,0.222246727801615,0,0,0,0.50695859978048,0.754505365544305,0.37456602987953,0.384150914429216,0.17230640686684,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.147198920134397,1.37147700954166,0,0.238436189947321,0.436039249896986,0.188218760830661,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0,0.394017929502254,0,0.464810523557898,0.385813221962283,0,0,0,0,0,0|short_description=p@chr5:53060697..53060716,-}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=175
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr5:53060697..53060716,-
|id=chr5:53060697..53060716,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,2.36e-12,6;CL:0000677,2.36e-12,6;CL:0000584,2.36e-12,6;CL:0000223,2.03e-11,20;CL:0002563,8.97e-11,9;CL:0002251,8.97e-11,9;CL:0000075,1.75e-10,7;CL:0000066,3.31e-10,25;CL:0002076,6.65e-08,15
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!4.08e-15!130;UBERON:0000925!4.08e-15!130;UBERON:0006595!4.08e-15!130;UBERON:0001007!5.13e-15!128;UBERON:0001555!5.13e-15!128;UBERON:0007026!5.13e-15!128;UBERON:0004921!4.58e-14!126;UBERON:0004185!4.58e-14!126;UBERON:0000160!1.37e-11!43;UBERON:0005409!3.40e-10!59;UBERON:0002107!1.39e-09!22;UBERON:0007499!1.39e-09!22;UBERON:0006925!1.39e-09!22;UBERON:0009497!1.39e-09!22;UBERON:0000015!1.39e-09!22;UBERON:0002423!1.39e-09!22;UBERON:0006235!1.39e-09!22;UBERON:0008835!1.39e-09!22;UBERON:0003894!1.39e-09!22;UBERON:0004161!1.39e-09!22;UBERON:0008836!1.39e-09!22;UBERON:0000344!2.31e-09!15;UBERON:0009854!8.14e-09!23;UBERON:0009856!8.14e-09!23;UBERON:0005911!1.67e-08!69;UBERON:0002365!1.81e-08!25;UBERON:0002330!1.81e-08!25;UBERON:0001242!2.41e-08!13;UBERON:0000060!2.41e-08!13;UBERON:0001262!2.41e-08!13;UBERON:0004786!2.41e-08!13;UBERON:0003929!1.29e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.32e-20,31;UBERON:0001007,1.05e-15,116;UBERON:0001555,1.05e-15,116;UBERON:0007026,1.05e-15,116;UBERON:0004119,2.66e-15,118;UBERON:0000925,2.66e-15,118;UBERON:0006595,2.66e-15,118;UBERON:0002107,3.99e-15,22;UBERON:0007499,3.99e-15,22;UBERON:0006925,3.99e-15,22;UBERON:0009497,3.99e-15,22;UBERON:0000015,3.99e-15,22;UBERON:0002423,3.99e-15,22;UBERON:0006235,3.99e-15,22;UBERON:0008835,3.99e-15,22;UBERON:0003894,3.99e-15,22;UBERON:0004161,3.99e-15,22;UBERON:0008836,3.99e-15,22;UBERON:0004921,5.14e-15,114;UBERON:0009854,2.50e-14,23;UBERON:0009856,2.50e-14,23;UBERON:0005409,2.02e-13,47;UBERON:0003929,4.48e-13,55;UBERON:0002365,6.29e-13,25;UBERON:0002330,6.29e-13,25;UBERON:0000344,4.86e-12,15;UBERON:0001242,1.11e-11,13;UBERON:0001262,1.11e-11,13;UBERON:0004786,1.11e-11,13;UBERON:0003350,8.97e-11,9;UBERON:0004808,8.97e-11,9;UBERON:0001277,8.97e-11,9;UBERON:0000490,4.94e-10,66;UBERON:0005911,2.25e-09,69;UBERON:0000485,1.28e-08,11;UBERON:0005172,5.25e-08,49;UBERON:0005173,5.25e-08,49;UBERON:0002417,5.25e-08,49;UBERON:0000916,5.25e-08,49;UBERON:0004923,8.59e-07,24
|phase1_expression=0,2.09385244583617,1.81999695755814,3.62957053568196,5.50985302940982,1.34303417529512,1.16806320297763,0,0.140788722151667,0,0.171217968225505,0,0,0.0874204024189974,0.666219523631325,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,1.11994695955385,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,0.570070258369122,0.252030129759931,1.10865255327652,0,0,0,0.866554859253824,0.166234645358492,2.04169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.45839474333043,0,0,0,0,0,0,2.58127163094416,0.679971333707751,13.4925797909454,9.09686984426737,8.51251085484938,1.26399978118577,0,0,0,0,0,2.54805239706646,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0.125666591329675,0.988779870937496,0.289198713839823,0,0,0.220841518460394,0,0,0,0,1.27728527604296,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0,0,6.52369753248069,0,0,0,0,0,0,0,2.06962696591213,0.215567992932842,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,0,0,4.62586296177317,4.23120906661671,0,0,0,0.605050573870028,0.444756087689741,0.380451252225118,3.32170343081158,0.329397909448022,1.50801125280162,1.59165177632921,1.36474860983384,1.79763881730844,3.02593269824572,3.58454291857861,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.505892296994058,1.32849133181642,1.255989822731,1.48076596706161,2.96452627087149,0,0.196558995113203,0.224862112384854,0.202860121388503,1.4470629585145,0.50925170356284,1.72617682470486,0.810676133875177,1.37280706594041,0,2.23284568601102,5.30464044294753,5.80931419278357,8.25228102200796,11.5786445127208,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0.472905432318573,0.221464689648775,0.159454768657487,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0.922305443831782,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0.63549621259146,0,0,0,0,0.119372344003136,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0.169978429993855,0,0,0.954670618015114,0.158167996790568,0.609958401380546,0.108005340821801,0.209088296014469,0,0.539457385539283,0.991841468704031,0,2.72191443912765,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0.5208175393758,0,0,0,0.632022241256357,0,0.205421914329655,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0.512200817262403,0.486213434136588,0,0,0.222246727801615,0,0,0,0.50695859978048,0.754505365544305,0.37456602987953,0.384150914429216,0.17230640686684,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.147198920134397,1.37147700954166,0,0.238436189947321,0.436039249896986,0.188218760830661,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0,0.394017929502254,0,0.464810523557898,0.385813221962283,0,0,0,0,0,0
|short_description=p@chr5:53060697..53060716,-
}}

Revision as of 07:45, 14 September 2013

Short description:p@chr5:53060697..53060716, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr5:53060697..53060716, -
Coexpression cluster:MCL_coexpression_mm9:175
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr5:53060697..53060716-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H18.25
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I12.72
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine2.32e-2031
digestive system1.05e-15116
digestive tract1.05e-15116
primitive gut1.05e-15116
endoderm-derived structure2.66e-15118
endoderm2.66e-15118
presumptive endoderm2.66e-15118
liver3.99e-1522
epithelial sac3.99e-1522
digestive gland3.99e-1522
epithelium of foregut-midgut junction3.99e-1522
anatomical boundary3.99e-1522
hepatobiliary system3.99e-1522
foregut-midgut junction3.99e-1522
hepatic diverticulum3.99e-1522
liver primordium3.99e-1522
septum transversum3.99e-1522
liver bud3.99e-1522
subdivision of digestive tract5.14e-15114
digestive tract diverticulum2.50e-1423
sac2.50e-1423
gastrointestinal system2.02e-1347
gut epithelium4.48e-1355
exocrine gland6.29e-1325
exocrine system6.29e-1325
mucosa4.86e-1215
intestinal mucosa1.11e-1113
wall of intestine1.11e-1113
gastrointestinal system mucosa1.11e-1113
epithelium of mucosa8.97e-119
gastrointestinal system epithelium8.97e-119
intestinal epithelium8.97e-119
unilaminar epithelium4.94e-1066
endo-epithelium2.25e-0969
simple columnar epithelium1.28e-0811
abdomen element5.25e-0849
abdominal segment element5.25e-0849
abdominal segment of trunk5.25e-0849
abdomen5.25e-0849
organ component layer8.59e-0724







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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