FFCP PHASE1:Hg19::chr9:15307200..15307243,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=158219|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23704|TSSclassifier=S|UniProt=B4DVQ6,Q5VTQ0,A5PLN1|association_with_transcript=0bp_to_ENST00000506891,ENST00000541445,uc003zlr.1,uc010mie.1,uc010mif.1,uc011lmq.1,uc011lmr.1,uc011lms.1_5end|coexpression_cluster_id=C4810|description=CAGE_peak_1_at_TTC39B_5end|id=chr9:15307200..15307243,-|ontology_enrichment_celltype=CL:0000791!7.56e-09!18;CL:0000789!7.56e-09!18;CL:0002420!7.56e-09!18;CL:0002419!7.56e-09!18;CL:0000790!7.56e-09!18;CL:0000625!2.70e-07!11|ontology_enrichment_celltype_v019=CL:0000791;6.07e-09;18!CL:0000789;6.07e-09;18!CL:0002419;6.07e-09;18!CL:0000625;2.31e-07;11|ontology_enrichment_celltype_v019_2=CL:0000791,7.51e-09,18;CL:0000789,7.51e-09,18;CL:0002420,7.51e-09,18;CL:0002419,7.51e-09,18;CL:0000790,7.51e-09,18;CL:0000625,2.68e-07,11|ontology_enrichment_development_v019=CL:0000790;6.07e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.13e-07,99|phase1_expression=7.08545679155171,7.70761886007539,8.45726424575827,10.007329835313,6.70441641640932,5.23403114460221,10.1319951267324,12.6343974685366,8.35794010239483,0.982935746006035,1.39560233594486,1.31064823278103,1.05506791291381,19.9263828265675,17.8954582893075,1.34465029290355,2.41077811209591,1.46062018077475,4.39139518911456,3.81675280038043,2.85600967741954,2.5076377718247,10.304495536718,10.2655818804663,9.66678324879982,3.97349709889347,2.8735206307481,3.54198515911557,9.04737836752479,14.9693465257913,6.19264493264304,8.27479102031034,5.4217065380085,17.378438477839,0,0,4.9912074686924,8.86392653651004,6.01633342410425,5.64228263861215,5.15005590751826,9.39291631455041,3.8636335145128,2.76256653681173,12.0920301980419,2.18325655069035,2.32429036905685,19.3248907370258,2.47765096716083,2.01384674625505,11.5272317938095,3.31075121844019,4.13694816883942,13.5551783552603,2.70852973188684,1.12945403725563,15.8285567033551,2.47195832889593,3.06083892370903,18.2929545433373,1.91801137739712,1.9791078011203,8.7764009353518,4.68847225585964,3.48251086354301,24.397564661719,2.4912889959823,1.50749199154046,11.4726242052444,4.56096573880745,10.8971910474006,25.411156883142,3.16462387440884,4.01385043992689,9.56719349842696,2.30624510059213,2.92054440980887,5.85689882081875,2.57160938715328,5.41524213108372,5.76858363877361,3.47061892152804,1.75996244461323,7.09980194640771,4.44754626931777,5.12076267079809,2.80277190925209,5.74752439954483,4.62731410949403,2.86216126360609,5.69212969109448,1.76171156811282,1.91136614062614,11.8954195721123,11.2101712596307,2.37045676297569,19.4742672412695,13.7553766962208,12.5416914389701,15.3811575759424,19.5553359980154,22.2520468695325,21.4309401248702,13.8148966537615,16.203324911116,18.3873132504406,15.4358202346059,13.9619538500986,9.88451041455075,21.7058034076852,20.1735512983669,24.6332622874795,22.3912710374711,35.0478484797524,11.4989076185474,18.5827322024009,11.1133943144557,20.9612741744404,13.4100436770337,21.0253173453904,25.3922547004003,20.9099449778642,20.0264908373438,22.2696703408688,29.983374372563,23.2041707003137,21.3493279199472,16.5317529444281,16.0464117470104,17.2341040620531,14.6284119788377,6.03630773733273,7.92747883429888,14.0961269429981,13.0347856765331,15.3537310098473,8.74814541756209,9.24606253575008,6.80650683581289,3.99112915432615,3.60122621341817,12.1155644835384,1.09288586487763,7.41568885568859,38.6211398449073,35.174206934452,35.7656913795747,1.19245312152671,0.571994910780128,0.371457501329565,2.58391129576717,4.30117297553062,3.12426451446835,5.08777147731609,1.67799774483962,1.37559020970034,2.50793959844173,4.39308490587859,3.20189636418039,3.68192674041137,4.02829317109147,5.32190474002959,4.39311703586705,3.67663080345869,2.43042584364528,6.42958043645374,6.28682243353275,3.82879033643296,3.06633274931766,0.949265659568129,2.74802615895611,1.31780417436063,3.87780264148325,6.54141078213801,12.424298792383,9.87717990983722,9.93068856099141,18.3575437279241,6.73869926176878,3.92474320099615,2.1349799145941,1.2333377420858,5.91300967259556,8.48677234039035,4.25000948094993,10.2923050798553,9.21881479167998,3.98346434117454,6.55536161343673,6.84566185853339,8.07022874979726,11.7434498643765,13.1117084938187,10.3933596959664,18.5780295841953,9.82674538494144,23.1449749833715,21.384051431077,14.0942149688777,4.55080680969013,4.31170885089743,11.1101835209684,10.0094815897571,9.97430815743058,17.1201272143527,11.0335606487647,12.7702350070607,3.62982986112067,15.2481190335533,11.9592137738398,8.26534414522291,10.8032794590385,9.17167510222106,20.868883743696,20.6589710528065,12.4894485858537,11.2052555935378,16.6606291001116,14.3597841881987,8.89053312503465,14.9104028856978,8.46317625112178,7.96934783859292,6.3776081543888,6.81865301477087,6.88331028933609,8.17223831068289,5.963839574466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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=158219 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23704 | |||
|TSSclassifier=S | |||
|UniProt=B4DVQ6,Q5VTQ0,A5PLN1 | |||
|association_with_transcript=0bp_to_ENST00000506891,ENST00000541445,uc003zlr.1,uc010mie.1,uc010mif.1,uc011lmq.1,uc011lmr.1,uc011lms.1_5end | |||
|coexpression_cluster_id=C4810 | |||
|description=CAGE_peak_1_at_TTC39B_5end | |||
|id=chr9:15307200..15307243,- | |||
|ontology_enrichment_celltype=CL:0000791!7.56e-09!18;CL:0000789!7.56e-09!18;CL:0002420!7.56e-09!18;CL:0002419!7.56e-09!18;CL:0000790!7.56e-09!18;CL:0000625!2.70e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.07e-09;18!CL:0000789;6.07e-09;18!CL:0002419;6.07e-09;18!CL:0000625;2.31e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.51e-09,18;CL:0000789,7.51e-09,18;CL:0002420,7.51e-09,18;CL:0002419,7.51e-09,18;CL:0000790,7.51e-09,18;CL:0000625,2.68e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.07e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.13e-07,99 | |||
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| |||
|short_description=p1@TTC39B | |||
}} |
Revision as of 08:28, 14 September 2013
Short description: | p1@TTC39B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TTC39B_5end |
Coexpression cluster: | C4810_Mast_squamous_Dendritic_Macrophage_small_temporal_CD4 |
Association with transcript: | 0bp_to_ENST00000506891, ENST00000541445, uc003zlr.1, uc010mie.1, uc010mif.1, uc011lmq.1, uc011lmr.1, uc011lms.1_5end |
EntrezGene: | TTC39B |
HGNC: | 23704 |
UniProt: | B4DVQ6Q5VTQ0A5PLN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.51e-09 | 18 |
alpha-beta T cell | 7.51e-09 | 18 |
immature T cell | 7.51e-09 | 18 |
mature T cell | 7.51e-09 | 18 |
immature alpha-beta T cell | 7.51e-09 | 18 |
CD8-positive, alpha-beta T cell | 2.68e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.13e-07 | 99 |
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