FFCP PHASE1:Hg19::chr9:35618447..35618456,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=971|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1696|TSSclassifier=S|UniProt=P21854,Q5TLG3|association_with_transcript=-23bp_to_ENST00000259633,NM_001782,uc003zxb.2,uc010mku.2,uc010mkv.2_5end|coexpression_cluster_id=C47|description=CAGE_peak_7_at_CD72_5end|id=chr9:35618447..35618456,-|ontology_enrichment_celltype=CL:0000236!6.07e-60!14;CL:0000945!2.52e-51!24;CL:0000826!2.52e-51!24;CL:0000838!1.34e-24!52;CL:0000542!4.63e-24!53;CL:0000051!4.63e-24!53;CL:0002087!2.65e-12!119;CL:0002031!2.40e-10!124;CL:0000037!3.59e-10!172;CL:0000566!3.59e-10!172;CL:0000738!8.30e-10!140;CL:0002032!1.03e-09!165;CL:0000837!1.03e-09!165;CL:0000988!2.44e-09!182;CL:0000817!1.35e-07!3;CL:0002619!2.20e-07!3|ontology_enrichment_celltype_v019=CL:0000236;6.82e-111;13!CL:0000945;5.38e-60;24!CL:0000542;1.29e-23;53|ontology_enrichment_celltype_v019_2=CL:0000236,6.12e-103,14;CL:0000945,5.57e-60,24;CL:0000826,5.57e-60,24;CL:0000838,1.64e-27,52;CL:0000542,5.50e-27,53;CL:0000051,5.50e-27,53;CL:0002087,4.72e-12,115;CL:0002031,1.57e-11,120;CL:0000738,4.14e-10,136;CL:0002032,1.91e-08,161;CL:0000837,1.91e-08,161;CL:0000037,4.56e-08,168;CL:0000988,1.27e-07,177|ontology_enrichment_development_v019=CL:0000051;1.29e-23;53!UBERON:0004872;3.22e-11;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!6.03e-08!3;UBERON:0004854!6.03e-08!3;UBERON:0009034!6.03e-08!3;UBERON:0002095!6.03e-08!3;UBERON:0004782!6.03e-08!3;UBERON:0003281!6.03e-08!3;UBERON:0009664!6.03e-08!3;UBERON:0002296!6.03e-08!3;UBERON:0005602!6.03e-08!3;UBERON:0001179!6.03e-08!3;UBERON:0006293!6.03e-08!3;UBERON:0004177!5.60e-07!7|ontology_enrichment_uberon_v019=UBERON:0002106;8.42e-25;3!UBERON:0004177;2.60e-15;5!UBERON:0005057;2.60e-15;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.93e-25,3;UBERON:0004854,7.93e-25,3;UBERON:0009034,7.93e-25,3;UBERON:0002095,7.93e-25,3;UBERON:0004782,7.93e-25,3;UBERON:0003281,7.93e-25,3;UBERON:0009664,7.93e-25,3;UBERON:0002296,7.93e-25,3;UBERON:0005602,7.93e-25,3;UBERON:0001179,7.93e-25,3;UBERON:0006293,7.93e-25,3;UBERON:0004177,3.14e-11,7;UBERON:0005057,3.14e-11,7;UBERON:0000945,6.06e-10,8;UBERON:0010039,6.06e-10,8;UBERON:0004457,6.35e-07,12;UBERON:0000042,6.35e-07,12;UBERON:0003887,6.35e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92960640696362,0.426507697462265,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.73069305631066,5.33705552318133,5.12076267079809,4.00395987036012,2.29900975981793,3.30522436392431,2.86216126360609,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0.721346064882224,0.284567373393656,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38342104727473,1.28915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.320568492303233|short_description=p7@CD72}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=971 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1696 | |||
|TSSclassifier=S | |||
|UniProt=P21854,Q5TLG3 | |||
|association_with_transcript=-23bp_to_ENST00000259633,NM_001782,uc003zxb.2,uc010mku.2,uc010mkv.2_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_7_at_CD72_5end | |||
|id=chr9:35618447..35618456,- | |||
|ontology_enrichment_celltype=CL:0000236!6.07e-60!14;CL:0000945!2.52e-51!24;CL:0000826!2.52e-51!24;CL:0000838!1.34e-24!52;CL:0000542!4.63e-24!53;CL:0000051!4.63e-24!53;CL:0002087!2.65e-12!119;CL:0002031!2.40e-10!124;CL:0000037!3.59e-10!172;CL:0000566!3.59e-10!172;CL:0000738!8.30e-10!140;CL:0002032!1.03e-09!165;CL:0000837!1.03e-09!165;CL:0000988!2.44e-09!182;CL:0000817!1.35e-07!3;CL:0002619!2.20e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.82e-111;13!CL:0000945;5.38e-60;24!CL:0000542;1.29e-23;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.12e-103,14;CL:0000945,5.57e-60,24;CL:0000826,5.57e-60,24;CL:0000838,1.64e-27,52;CL:0000542,5.50e-27,53;CL:0000051,5.50e-27,53;CL:0002087,4.72e-12,115;CL:0002031,1.57e-11,120;CL:0000738,4.14e-10,136;CL:0002032,1.91e-08,161;CL:0000837,1.91e-08,161;CL:0000037,4.56e-08,168;CL:0000988,1.27e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.29e-23;53!UBERON:0004872;3.22e-11;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!6.03e-08!3;UBERON:0004854!6.03e-08!3;UBERON:0009034!6.03e-08!3;UBERON:0002095!6.03e-08!3;UBERON:0004782!6.03e-08!3;UBERON:0003281!6.03e-08!3;UBERON:0009664!6.03e-08!3;UBERON:0002296!6.03e-08!3;UBERON:0005602!6.03e-08!3;UBERON:0001179!6.03e-08!3;UBERON:0006293!6.03e-08!3;UBERON:0004177!5.60e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.42e-25;3!UBERON:0004177;2.60e-15;5!UBERON:0005057;2.60e-15;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.93e-25,3;UBERON:0004854,7.93e-25,3;UBERON:0009034,7.93e-25,3;UBERON:0002095,7.93e-25,3;UBERON:0004782,7.93e-25,3;UBERON:0003281,7.93e-25,3;UBERON:0009664,7.93e-25,3;UBERON:0002296,7.93e-25,3;UBERON:0005602,7.93e-25,3;UBERON:0001179,7.93e-25,3;UBERON:0006293,7.93e-25,3;UBERON:0004177,3.14e-11,7;UBERON:0005057,3.14e-11,7;UBERON:0000945,6.06e-10,8;UBERON:0010039,6.06e-10,8;UBERON:0004457,6.35e-07,12;UBERON:0000042,6.35e-07,12;UBERON:0003887,6.35e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92960640696362,0.426507697462265,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.73069305631066,5.33705552318133,5.12076267079809,4.00395987036012,2.29900975981793,3.30522436392431,2.86216126360609,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0.721346064882224,0.284567373393656,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38342104727473,1.28915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.320568492303233 | |||
|short_description=p7@CD72 | |||
}} |
Revision as of 08:55, 14 September 2013
Short description: | p7@CD72 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_CD72_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -23bp_to_ENST00000259633, NM_001782, uc003zxb.2, uc010mku.2, uc010mkv.2_5end |
EntrezGene: | CD72 |
HGNC: | 1696 |
UniProt: | P21854Q5TLG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.12e-103 | 14 |
lymphocyte of B lineage | 5.57e-60 | 24 |
pro-B cell | 5.57e-60 | 24 |
lymphoid lineage restricted progenitor cell | 1.64e-27 | 52 |
lymphocyte | 5.50e-27 | 53 |
common lymphoid progenitor | 5.50e-27 | 53 |
nongranular leukocyte | 4.72e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.57e-11 | 120 |
leukocyte | 4.14e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.91e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.91e-08 | 161 |
hematopoietic stem cell | 4.56e-08 | 168 |
hematopoietic cell | 1.27e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.93e-25 | 3 |
gastrointestinal system mesentery | 7.93e-25 | 3 |
stomach region | 7.93e-25 | 3 |
mesentery | 7.93e-25 | 3 |
gastrointestinal system serosa | 7.93e-25 | 3 |
mesentery of stomach | 7.93e-25 | 3 |
gut mesentery | 7.93e-25 | 3 |
dorsal mesentery | 7.93e-25 | 3 |
dorsal mesogastrium | 7.93e-25 | 3 |
peritoneal cavity | 7.93e-25 | 3 |
spleen primordium | 7.93e-25 | 3 |
hemopoietic organ | 3.14e-11 | 7 |
immune organ | 3.14e-11 | 7 |
stomach | 6.06e-10 | 8 |
food storage organ | 6.06e-10 | 8 |
cavity lining | 6.35e-07 | 12 |
serous membrane | 6.35e-07 | 12 |
intraembryonic coelom | 6.35e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.