FFCP PHASE1:Mm9::chr6:4550658..4550676,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=213819|HGNC=|MCL_coexpression_id=314|UniProt=Q7TN73|association_with_transcript=-163bp_to_ENSMUST00000015333_5end|description=CAGE_peak_5_at_Casd1_5end|id=chr6:4550658..4550676,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,5.20e-07,9;CL:0002251,5.20e-07,9;CL:0002250,7.82e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.64e-12!59;UBERON:0000160!3.92e-11!43;UBERON:0001007!5.10e-09!128;UBERON:0001555!5.10e-09!128;UBERON:0007026!5.10e-09!128;UBERON:0004119!1.71e-08!130;UBERON:0000925!1.71e-08!130;UBERON:0006595!1.71e-08!130;UBERON:0004921!3.23e-08!126;UBERON:0004185!3.23e-08!126;UBERON:0000344!5.83e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.56e-25,31;UBERON:0005409,1.04e-24,47;UBERON:0001007,2.17e-14,116;UBERON:0001555,2.17e-14,116;UBERON:0007026,2.17e-14,116;UBERON:0004119,5.51e-14,118;UBERON:0000925,5.51e-14,118;UBERON:0006595,5.51e-14,118;UBERON:0000344,2.43e-13,15;UBERON:0004921,1.01e-12,114;UBERON:0001242,1.17e-10,13;UBERON:0001262,1.17e-10,13;UBERON:0004786,1.17e-10,13;UBERON:0004923,6.62e-09,24;UBERON:0002108,3.34e-08,4;UBERON:0003350,5.20e-07,9;UBERON:0004808,5.20e-07,9;UBERON:0001277,5.20e-07,9;UBERON:0000331,6.27e-07,3;UBERON:0002116,6.27e-07,3;UBERON:0001204,6.27e-07,3;UBERON:0001168,6.27e-07,3|phase1_expression=0,0.348975407639361,1.36499771816861,0,0,2.18243053485457,1.40167584357315,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.59992422793407,1.83527424853736,1.14846392823004,1.7230479846363,0.215471232685889,4.18051522804023,3.2763916868791,3.54768817048488,0,0,0,3.75507105676657,2.65975432573588,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,0,0.766124028511126,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.763991238884051,0.883885756421003,0.427115042397309,0.186399445825301,0,0,0.579728977403356,0.860423876981386,0,1.07940638327563,1.94932925234301,4.92829575807069,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,1.82694207550496,0,0.148442139064825,0.173485326766136,0,0,0,0,0,1.97755974187499,0,0,0,0.220841518460394,0.484875253135222,11.1835056730873,0,0.41889341362691,1.02182822083437,0,0,0,0.449371918214468,0.915001205637253,0.251308704225729,0.521472960576829,0,0.20778804455956,0.648965052271031,0,2.73695335342205,11.1198013710817,0.631325567659422,0.130120442962704,0,0,0,0.272145996605311,0.12811372028485,0,0,0.646703978798527,0.567318240503458,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0.330418782983798,2.11560453330835,0.426576501070468,0,0.257734922644187,0.80673409849337,1.77902435075896,2.85338439168839,0.949058123089023,3.62337700392824,3.77002813200404,3.38226002469956,2.72949721966768,1.79763881730844,8.21324589523838,5.37681437786791,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.147610147979602,0,0.370191491765402,1.77871576252289,0,0,0,0,0,0,0.287696137450811,0,0,0,1.86070473834252,1.5601883655728,0.757736633841335,1.79397413521912,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0.983528546038072,0.275936746304732,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0,0,1.81467135269789,0,0,0.604647113929502,0.188605079755898,0,0,1.55056975900933,0.363533729477506,1.06949213515416,0,0,0,0.680879211507576,0.18006109403131,0,0,0.709360934569094,0,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.16488625294148,0.161464426695906,0.301564624640779,0,0.328281799490123,1.45740418314925,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0.316335993581135,0.406638934253697,1.29606408986162,1.04544148007234,0.87345025498471,1.34864346384821,1.07449492442937,1.04702376793612,9.0730481304255,3.10669656543463,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.358053391334963,0,0,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.292373642219257,0,0,0.680191150845634,0,0,0,0.579568782096571,0,2.93042598827624,0.857473516316263,0,0.564751842617067,0,1.14579102687879,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.565879024158229,0.37456602987953,0.768301828858431,0.459483751644906,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0.342869252385415,0.532427418478012,0,0.436039249896986,0.470546902076653,0.423073039458382,0.548783918618318,0,0.271608227691724,0,0.593175090620871,0.197008964751127,0,0.309873682371932,0.578719832943424,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0|short_description=p5@Casd1}} | ||
|EntrezGene=213819 | |||
|HGNC= | |||
|MCL_coexpression_id=314 | |||
|UniProt=Q7TN73 | |||
|association_with_transcript=-163bp_to_ENSMUST00000015333_5end | |||
|description=CAGE_peak_5_at_Casd1_5end | |||
|id=chr6:4550658..4550676,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.20e-07,9;CL:0002251,5.20e-07,9;CL:0002250,7.82e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.64e-12!59;UBERON:0000160!3.92e-11!43;UBERON:0001007!5.10e-09!128;UBERON:0001555!5.10e-09!128;UBERON:0007026!5.10e-09!128;UBERON:0004119!1.71e-08!130;UBERON:0000925!1.71e-08!130;UBERON:0006595!1.71e-08!130;UBERON:0004921!3.23e-08!126;UBERON:0004185!3.23e-08!126;UBERON:0000344!5.83e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.56e-25,31;UBERON:0005409,1.04e-24,47;UBERON:0001007,2.17e-14,116;UBERON:0001555,2.17e-14,116;UBERON:0007026,2.17e-14,116;UBERON:0004119,5.51e-14,118;UBERON:0000925,5.51e-14,118;UBERON:0006595,5.51e-14,118;UBERON:0000344,2.43e-13,15;UBERON:0004921,1.01e-12,114;UBERON:0001242,1.17e-10,13;UBERON:0001262,1.17e-10,13;UBERON:0004786,1.17e-10,13;UBERON:0004923,6.62e-09,24;UBERON:0002108,3.34e-08,4;UBERON:0003350,5.20e-07,9;UBERON:0004808,5.20e-07,9;UBERON:0001277,5.20e-07,9;UBERON:0000331,6.27e-07,3;UBERON:0002116,6.27e-07,3;UBERON:0001204,6.27e-07,3;UBERON:0001168,6.27e-07,3 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,0,0,2.18243053485457,1.40167584357315,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.59992422793407,1.83527424853736,1.14846392823004,1.7230479846363,0.215471232685889,4.18051522804023,3.2763916868791,3.54768817048488,0,0,0,3.75507105676657,2.65975432573588,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,0,0.766124028511126,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.763991238884051,0.883885756421003,0.427115042397309,0.186399445825301,0,0,0.579728977403356,0.860423876981386,0,1.07940638327563,1.94932925234301,4.92829575807069,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,1.82694207550496,0,0.148442139064825,0.173485326766136,0,0,0,0,0,1.97755974187499,0,0,0,0.220841518460394,0.484875253135222,11.1835056730873,0,0.41889341362691,1.02182822083437,0,0,0,0.449371918214468,0.915001205637253,0.251308704225729,0.521472960576829,0,0.20778804455956,0.648965052271031,0,2.73695335342205,11.1198013710817,0.631325567659422,0.130120442962704,0,0,0,0.272145996605311,0.12811372028485,0,0,0.646703978798527,0.567318240503458,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0.330418782983798,2.11560453330835,0.426576501070468,0,0.257734922644187,0.80673409849337,1.77902435075896,2.85338439168839,0.949058123089023,3.62337700392824,3.77002813200404,3.38226002469956,2.72949721966768,1.79763881730844,8.21324589523838,5.37681437786791,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.147610147979602,0,0.370191491765402,1.77871576252289,0,0,0,0,0,0,0.287696137450811,0,0,0,1.86070473834252,1.5601883655728,0.757736633841335,1.79397413521912,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0.983528546038072,0.275936746304732,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0,0,1.81467135269789,0,0,0.604647113929502,0.188605079755898,0,0,1.55056975900933,0.363533729477506,1.06949213515416,0,0,0,0.680879211507576,0.18006109403131,0,0,0.709360934569094,0,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.16488625294148,0.161464426695906,0.301564624640779,0,0.328281799490123,1.45740418314925,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0.316335993581135,0.406638934253697,1.29606408986162,1.04544148007234,0.87345025498471,1.34864346384821,1.07449492442937,1.04702376793612,9.0730481304255,3.10669656543463,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.358053391334963,0,0,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.292373642219257,0,0,0.680191150845634,0,0,0,0.579568782096571,0,2.93042598827624,0.857473516316263,0,0.564751842617067,0,1.14579102687879,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.565879024158229,0.37456602987953,0.768301828858431,0.459483751644906,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0.342869252385415,0.532427418478012,0,0.436039249896986,0.470546902076653,0.423073039458382,0.548783918618318,0,0.271608227691724,0,0.593175090620871,0.197008964751127,0,0.309873682371932,0.578719832943424,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p5@Casd1 | |||
}} |
Revision as of 10:02, 14 September 2013
Short description: | p5@Casd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Casd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:314 |
Association with transcript: | -163bp_to_ENSMUST00000015333_5end |
EntrezGene: | Casd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.20e-07 | 9 |
epithelial cell of alimentary canal | 5.20e-07 | 9 |
intestinal crypt stem cell | 7.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.56e-25 | 31 |
gastrointestinal system | 1.04e-24 | 47 |
digestive system | 2.17e-14 | 116 |
digestive tract | 2.17e-14 | 116 |
primitive gut | 2.17e-14 | 116 |
endoderm-derived structure | 5.51e-14 | 118 |
endoderm | 5.51e-14 | 118 |
presumptive endoderm | 5.51e-14 | 118 |
mucosa | 2.43e-13 | 15 |
subdivision of digestive tract | 1.01e-12 | 114 |
intestinal mucosa | 1.17e-10 | 13 |
wall of intestine | 1.17e-10 | 13 |
gastrointestinal system mucosa | 1.17e-10 | 13 |
organ component layer | 6.62e-09 | 24 |
small intestine | 3.34e-08 | 4 |
epithelium of mucosa | 5.20e-07 | 9 |
gastrointestinal system epithelium | 5.20e-07 | 9 |
intestinal epithelium | 5.20e-07 | 9 |
ileal mucosa | 6.27e-07 | 3 |
ileum | 6.27e-07 | 3 |
mucosa of small intestine | 6.27e-07 | 3 |
wall of small intestine | 6.27e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.