FFCP PHASE1:Hg19::chrX:2670209..2670230,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7499|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12806|TSSclassifier=S|UniProt=Q496P1|association_with_transcript=0bp_to_ENST00000533923_5end|coexpression_cluster_id=C2028|description=CAGE_peak_3_at_XG_5end|id=chrX:2670209..2670230,+|ontology_enrichment_celltype=CL:0002334!4.42e-22!12;CL:0000136!3.51e-20!15;CL:1000306!2.42e-11!4;CL:0002547!2.42e-11!4;CL:0002580!1.10e-09!3;CL:0002521!2.13e-09!3;CL:0000325!2.08e-07!39;CL:0000057!2.86e-07!75;CL:0002617!4.76e-07!2|ontology_enrichment_celltype_v019=CL:0002334;4.47e-32;12!CL:0000136;3.71e-23;13!CL:0002580;3.12e-16;3!CL:0002521;1.26e-15;3!CL:1000306;1.34e-11;4!CL:0002547;1.34e-11;4!CL:0002617;1.86e-11;2!CL:0002583;1.32e-10;2!CL:0002615;2.41e-07;3!CL:0002582;2.74e-07;3|ontology_enrichment_celltype_v019_2=CL:0002334,2.91e-32,12;CL:0000136,4.10e-20,15;CL:0002580,3.29e-16,3;CL:0002521,1.09e-15,3;CL:1000306,1.37e-11,4;CL:0002547,1.37e-11,4;CL:0002617,1.82e-11,2;CL:0002583,1.09e-10,2;CL:0000057,1.44e-09,76;CL:0002615,1.81e-07,3;CL:0002582,2.12e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060084!1.42e-08!3;DOID:127!1.42e-08!3;DOID:1192!1.61e-08!3|ontology_enrichment_disease_v019=DOID:1192;2.74e-07;3|ontology_enrichment_disease_v019_2=DOID:1192,2.74e-07,3|ontology_enrichment_uberon=UBERON:0002072!2.44e-14!5;UBERON:0000415!2.42e-11!4;UBERON:0007240!2.42e-11!4;UBERON:0005742!2.42e-11!4;UBERON:0005734!2.42e-11!4;UBERON:0004664!2.42e-11!4;UBERON:0004663!2.42e-11!4;UBERON:0000310!4.70e-10!10;UBERON:0002190!2.13e-09!3;UBERON:0001443!4.67e-09!11;UBERON:0003688!1.13e-07!6;UBERON:0002358!1.13e-07!6;UBERON:0003684!1.13e-07!6;UBERON:0001178!1.13e-07!6|ontology_enrichment_uberon_v019=UBERON:0002072;1.81e-24;5!UBERON:0000310;7.48e-18;10!UBERON:0001443;3.58e-16;11!UBERON:0002190;1.26e-15;3!UBERON:0004797;1.34e-11;4!UBERON:0000415;1.34e-11;4!UBERON:0007240;1.34e-11;4!UBERON:0005742;1.34e-11;4!UBERON:0005734;1.34e-11;4!UBERON:0004664;1.34e-11;4!UBERON:0004663;1.34e-11;4!UBERON:0003688;6.41e-08;6!UBERON:0002358;6.41e-08;6!UBERON:0003684;6.41e-08;6!UBERON:0001178;6.41e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0002072,1.29e-24,5;UBERON:0000310,8.07e-18,10;UBERON:0001443,3.84e-16,11;UBERON:0002190,1.09e-15,3;UBERON:0000415,1.37e-11,4;UBERON:0007240,1.37e-11,4;UBERON:0005742,1.37e-11,4;UBERON:0005734,1.37e-11,4;UBERON:0004664,1.37e-11,4;UBERON:0004663,1.37e-11,4;UBERON:0003688,5.12e-08,6;UBERON:0002358,5.12e-08,6;UBERON:0003684,5.12e-08,6;UBERON:0001178,5.12e-08,6;UBERON:0002199,6.70e-07,46;UBERON:0002416,6.70e-07,46;UBERON:0004797,8.35e-07,7|phase1_expression=7.63049192936338,9.42042305120326,1.9733616573436,3.00219895059391,0,0,2.53299878168311,5.68547886084148,3.65659879479774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72046919021225,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.64619665163954,2.1185468930115,6.02356903572509,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0.570471821544449,1.34503812496621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,1.2813443329114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,2.45471508531751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603173834469785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.621984346622316,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.868687840005475,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,10.9167435440262,9.36118037057181,4.2099014164961,0.896974044789907,6.65219423786715,0,4.45254199334973,1.69630663182921,3.37367278094941,2.38168752440047,0,1.85936605535935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41527737101321,0,0,0,0,0,0,0,1.13008116620243,4.96228809191512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46205491157214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,1.80784592624426,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,7.77799342081141,0.653174720218818,0,0,1.19271615249795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,1.83807346058077,0.983617892129413,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12806 | |||
|TSSclassifier=S | |||
|UniProt=Q496P1 | |||
|association_with_transcript=0bp_to_ENST00000533923_5end | |||
|coexpression_cluster_id=C2028 | |||
|description=CAGE_peak_3_at_XG_5end | |||
|id=chrX:2670209..2670230,+ | |||
|ontology_enrichment_celltype=CL:0002334!4.42e-22!12;CL:0000136!3.51e-20!15;CL:1000306!2.42e-11!4;CL:0002547!2.42e-11!4;CL:0002580!1.10e-09!3;CL:0002521!2.13e-09!3;CL:0000325!2.08e-07!39;CL:0000057!2.86e-07!75;CL:0002617!4.76e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.47e-32;12!CL:0000136;3.71e-23;13!CL:0002580;3.12e-16;3!CL:0002521;1.26e-15;3!CL:1000306;1.34e-11;4!CL:0002547;1.34e-11;4!CL:0002617;1.86e-11;2!CL:0002583;1.32e-10;2!CL:0002615;2.41e-07;3!CL:0002582;2.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.91e-32,12;CL:0000136,4.10e-20,15;CL:0002580,3.29e-16,3;CL:0002521,1.09e-15,3;CL:1000306,1.37e-11,4;CL:0002547,1.37e-11,4;CL:0002617,1.82e-11,2;CL:0002583,1.09e-10,2;CL:0000057,1.44e-09,76;CL:0002615,1.81e-07,3;CL:0002582,2.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060084!1.42e-08!3;DOID:127!1.42e-08!3;DOID:1192!1.61e-08!3 | |||
|ontology_enrichment_disease_v019=DOID:1192;2.74e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,2.74e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002072!2.44e-14!5;UBERON:0000415!2.42e-11!4;UBERON:0007240!2.42e-11!4;UBERON:0005742!2.42e-11!4;UBERON:0005734!2.42e-11!4;UBERON:0004664!2.42e-11!4;UBERON:0004663!2.42e-11!4;UBERON:0000310!4.70e-10!10;UBERON:0002190!2.13e-09!3;UBERON:0001443!4.67e-09!11;UBERON:0003688!1.13e-07!6;UBERON:0002358!1.13e-07!6;UBERON:0003684!1.13e-07!6;UBERON:0001178!1.13e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;1.81e-24;5!UBERON:0000310;7.48e-18;10!UBERON:0001443;3.58e-16;11!UBERON:0002190;1.26e-15;3!UBERON:0004797;1.34e-11;4!UBERON:0000415;1.34e-11;4!UBERON:0007240;1.34e-11;4!UBERON:0005742;1.34e-11;4!UBERON:0005734;1.34e-11;4!UBERON:0004664;1.34e-11;4!UBERON:0004663;1.34e-11;4!UBERON:0003688;6.41e-08;6!UBERON:0002358;6.41e-08;6!UBERON:0003684;6.41e-08;6!UBERON:0001178;6.41e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,1.29e-24,5;UBERON:0000310,8.07e-18,10;UBERON:0001443,3.84e-16,11;UBERON:0002190,1.09e-15,3;UBERON:0000415,1.37e-11,4;UBERON:0007240,1.37e-11,4;UBERON:0005742,1.37e-11,4;UBERON:0005734,1.37e-11,4;UBERON:0004664,1.37e-11,4;UBERON:0004663,1.37e-11,4;UBERON:0003688,5.12e-08,6;UBERON:0002358,5.12e-08,6;UBERON:0003684,5.12e-08,6;UBERON:0001178,5.12e-08,6;UBERON:0002199,6.70e-07,46;UBERON:0002416,6.70e-07,46;UBERON:0004797,8.35e-07,7 | |||
|phase1_expression=7.63049192936338,9.42042305120326,1.9733616573436,3.00219895059391,0,0,2.53299878168311,5.68547886084148,3.65659879479774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72046919021225,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.64619665163954,2.1185468930115,6.02356903572509,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0.570471821544449,1.34503812496621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,1.2813443329114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,2.45471508531751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603173834469785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.621984346622316,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.868687840005475,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,10.9167435440262,9.36118037057181,4.2099014164961,0.896974044789907,6.65219423786715,0,4.45254199334973,1.69630663182921,3.37367278094941,2.38168752440047,0,1.85936605535935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41527737101321,0,0,0,0,0,0,0,1.13008116620243,4.96228809191512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46205491157214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,1.80784592624426,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,7.77799342081141,0.653174720218818,0,0,1.19271615249795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,1.83807346058077,0.983617892129413,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23457967189298,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,7.03484977438482,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10679961302337,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p3@XG | |||
}} |
Revision as of 11:40, 14 September 2013
Short description: | p3@XG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_XG_5end |
Coexpression cluster: | C2028_peripheral_Preadipocyte_Adipocyte_Gingival_Smooth_leiomyoma_Fibroblast |
Association with transcript: | 0bp_to_ENST00000533923_5end |
EntrezGene: | XG |
HGNC: | 12806 |
UniProt: | Q496P1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.91e-32 | 12 |
fat cell | 4.10e-20 | 15 |
preadipocyte of the breast | 3.29e-16 | 3 |
subcutaneous fat cell | 1.09e-15 | 3 |
fibroblast of tunica adventitia of artery | 1.37e-11 | 4 |
fibroblast of the aortic adventitia | 1.37e-11 | 4 |
adipocyte of breast | 1.82e-11 | 2 |
subcutaneous preadipocyte | 1.09e-10 | 2 |
fibroblast | 1.44e-09 | 76 |
adipocyte of omentum tissue | 1.81e-07 | 3 |
visceral preadipocyte | 2.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 1.29e-24 | 5 |
breast | 8.07e-18 | 10 |
chest | 3.84e-16 | 11 |
subcutaneous adipose tissue | 1.09e-15 | 3 |
artery wall | 1.37e-11 | 4 |
tunica adventitia of artery | 1.37e-11 | 4 |
adventitia | 1.37e-11 | 4 |
tunica adventitia of blood vessel | 1.37e-11 | 4 |
aorta tunica adventitia | 1.37e-11 | 4 |
aorta wall | 1.37e-11 | 4 |
omentum | 5.12e-08 | 6 |
peritoneum | 5.12e-08 | 6 |
abdominal cavity | 5.12e-08 | 6 |
visceral peritoneum | 5.12e-08 | 6 |
integument | 6.70e-07 | 46 |
integumental system | 6.70e-07 | 46 |
blood vessel layer | 8.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 2.74e-07 | 3 |
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