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FFCP PHASE1:Mm9::chr7:5013355..5013364,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=22185|HGNC=|UniProt=P26369,Q80XR5|association_with_transcript=-380bp_to_ENSMUST00000005041,NM_001205231,NM_133671_5end|description=CAGE_peak_4_at_U2af2_5end|id=chr7:5013355..5013364,+|ontology_enrichment_celltype=CL:0000117!6.55e-07!23;CL:0000337!6.55e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.84e-09,23;CL:0000337,9.84e-09,23;CL:0000540,1.36e-07,33;CL:0000047,1.36e-07,33;CL:0000031,1.36e-07,33;CL:0000404,1.36e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.91e-10,64;UBERON:0003075,5.91e-10,64;UBERON:0007284,5.91e-10,64;UBERON:0003056,7.24e-10,49;UBERON:0010371,1.22e-08,73;UBERON:0004121,3.74e-08,95;UBERON:0000924,3.74e-08,95;UBERON:0006601,3.74e-08,95;UBERON:0001017,8.36e-08,73;UBERON:0001016,2.60e-07,75;UBERON:0001049,4.27e-07,52;UBERON:0005068,4.27e-07,52;UBERON:0006241,4.27e-07,52;UBERON:0007135,4.27e-07,52;UBERON:0000073,4.90e-07,54|phase1_expression=1.44133962394315,1.04692622291808,0.909998478779072,1.20985684522732,1.00179145989269,1.17515490338323,0,0.387369970324729,0.281577444303333,0.234064526321993,0.34243593645101,0.159544317990673,0.171200729931206,0.262261207256992,0.333109761815663,0.607425802169478,0.699561878128147,0.157731082679119,0,0,0.340173160604279,0.695036658406197,0,0.319984845586813,0,0,0.86152399231815,0.861884930743556,0.380046838912748,0.504060259519861,0.221730510655305,0.635030673459631,0.61506478758457,0,1.1554064790051,0,0.612508068787107,0.418531630736908,0,0,0,0,0.485510353031154,0.251793635951155,0.304130793658544,0.367093504323363,0.782391344348039,1.30815093828268,1.09843091367236,0.972149495371417,0.419959264876088,0,1.00669563634642,0,0.672187598284928,0.514518872071894,0.85960031981627,0,5.26022798234954,5.81890077199236,3.1691570175309,0,0,0,0,1.4209602298922,0.898800331555214,0,1.24427534770173,1.35005938331691,1.05162480675691,2.28520787523043,1.98781686856452,1.10241719293459,2.30029130443767,0.919218786610021,0,1.0214987046815,0.768032666281217,3.69281605644543,2.65314166446988,1.56274011167028,0.558365998002762,0,1.22238598221448,2.06240009831567,1.70846016958924,0.931997229126503,0.151452386666368,0.0755715601067855,0.579728977403356,0,0.679971333707751,0,0,0.448026887097336,0.280888840263504,0.511290967734173,0,0,1.12674735821344,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0.517875767294343,0.445326417194474,1.04091196059682,0,0.461230994512117,0.301445281105245,0.705532242814229,0.376999773989026,0.494389935468748,0.433798070759735,0,0.647067399789637,0.441683036920787,0.969750506270444,0,0,0.83778682725382,0.766371165625774,0.359445373517761,0.599902730993408,0,1.04853447583376,0,1.13088916901578,0.695297280769106,1.53429274398198,0.62336413367868,1.78465389374533,1.32391173005411,0.622034853050465,1.26361379216837,0.420883711772948,1.43132487258974,1.60931473103431,0.540186389416048,1.9591626318643,1.29269348387523,2.562274405697,1.87403449119458,1.81092359517311,1.29340795759705,0.756424320671277,0.703804496655795,1.31517439456545,0.278047249225598,0,1.02891068203972,1.79130840136644,0,0.257347907114715,0.284163499395593,1.24275463521301,0.469052119962192,0.540186184383045,0.473489471170421,0,0.617068451549513,0.697601834251224,0.536546802799238,0.467061369468678,0.987359099480883,0.820837320395476,0.486412857275134,0.292399974850665,0.219550115291051,0.671032093801859,1.68231958851302,1.3377599609307,0,0.528901133327089,1.2797295032114,1.16118335930219,0.515469845288373,0.201683524623343,0.667134131534611,0.570676878337677,0.474529061544512,0.164698954724011,1.25667604400135,1.79060824837036,0,0,0.216138049874694,0.597423819763102,1.51734320762465,1.14248512609729,0,1.01825663922657,0.775809948670503,1.33258057791605,1.20149420536089,0.442830443938806,0.784993639206874,0.493588655687202,0,0.667380422864376,0.786235980452812,1.12431056192427,0.811440485554012,0.482354319504834,0.50925170356284,0,0.486405680325106,0.274561413188081,0,1.86070473834252,0.624075346229121,0.252578877947112,0.179397413521912,0.964887042726734,0.369506380333209,1.51593129416388,0.651859905768103,0.848725428875941,0,0.670025029767263,0,0.780534591431195,0.945810864637146,0.8858587585951,1.11618338060241,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,0,0,0,0.642202359951168,0.234423373184406,0.655739781506702,0.252470927204373,0,0.780877488593277,1.07711698866399,0.477937595905104,0.668396022247182,0.566153061577665,1.21443210502468,0.292255857911312,1.58115111178609,1.28528526568723,0.99358059645788,1.24645922567079,1.46598263418218,0.329940245945071,0,1.94224508923985,0.906970670894253,0.754420319023592,0.885905678642318,0.307435147943927,1.03371317267288,0.727067458955011,2.13898427030833,0.632073515871632,0,0,0.340439605753788,1.08036656418786,2.32845630808958,2.14337035031592,1.24138163549592,2.14042581122485,1.97458824722545,1.522324745573,0.23467170806371,0,0.661585194164886,0.8244312647074,0.161464426695906,0.422190474497091,0.954978752025092,0.820704498725306,0.582961673259701,0.18542530201051,0.341741761595705,1.03193433981611,1.29636169158798,1.13021074202815,0.683471138605126,0.915112692826091,0.169978429993855,0.69975726161829,0.690999869022119,0.954670618015114,1.42351197111511,1.01659733563424,0.756037385752609,0.627264888043406,1.09181281873089,0.269728692769641,0.495920734352016,0.523511883968059,0.648074866458964,0,1.12738587736838,1.19613236835183,1.82004339502807,1.16670713006429,1.16243841129958,1.35164900392623,1.64300134104056,1.3020438484395,0.838874755405687,0.724752362478018,1.72818003754719,0.632022241256357,0.608175645870493,0.513554785824136,0.77952493786677,0.716106782669926,0.198681354781265,0.240390899039938,0.443068581523732,0.504832249740738,0.381034033274999,0.403304740547362,0.194915761479505,0.769694733122636,0.116876902181569,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,0.386379188064381,0.187682475451182,0.549454872801795,0.428736758158132,0.501572104035363,1.12950368523413,0.460325236507177,1.14579102687879,0.343706364687375,0.685082519770642,0,0,0,0.453142408984205,0,1.764384908931,3.99024873401031,1.36586884603307,0.243106717068294,1.25767897576789,0.735374033800057,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,1.2673964994512,1.50901073108861,0.842773567228942,0.832326981263301,0.516919220600519,1.42888107384922,0.579421629724277,2.12200142510076,1.23625770240992,1.03039244094078,0.685738504770831,0.354951612318675,0.715308569841963,0.290692833264657,1.03520318456864,0.592302255241736,0.365855945745545,0.789209134313529,0.679020569229309,1.68342681497322,1.42362021749009,1.18205378850676,0.818462086339379,0.77468420592983,0.964533054905707,0.749431733813838,1.87145286756327,0.214871054048298,1.3390183244819,0.882365676478062,0.695603506861264|short_description=p4@U2af2}}
|EntrezGene=22185
|HGNC=
|UniProt=P26369,Q80XR5
|association_with_transcript=-380bp_to_ENSMUST00000005041,NM_001205231,NM_133671_5end
|description=CAGE_peak_4_at_U2af2_5end
|id=chr7:5013355..5013364,+
|ontology_enrichment_celltype=CL:0000117!6.55e-07!23;CL:0000337!6.55e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,9.84e-09,23;CL:0000337,9.84e-09,23;CL:0000540,1.36e-07,33;CL:0000047,1.36e-07,33;CL:0000031,1.36e-07,33;CL:0000404,1.36e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.91e-10,64;UBERON:0003075,5.91e-10,64;UBERON:0007284,5.91e-10,64;UBERON:0003056,7.24e-10,49;UBERON:0010371,1.22e-08,73;UBERON:0004121,3.74e-08,95;UBERON:0000924,3.74e-08,95;UBERON:0006601,3.74e-08,95;UBERON:0001017,8.36e-08,73;UBERON:0001016,2.60e-07,75;UBERON:0001049,4.27e-07,52;UBERON:0005068,4.27e-07,52;UBERON:0006241,4.27e-07,52;UBERON:0007135,4.27e-07,52;UBERON:0000073,4.90e-07,54
|phase1_expression=1.44133962394315,1.04692622291808,0.909998478779072,1.20985684522732,1.00179145989269,1.17515490338323,0,0.387369970324729,0.281577444303333,0.234064526321993,0.34243593645101,0.159544317990673,0.171200729931206,0.262261207256992,0.333109761815663,0.607425802169478,0.699561878128147,0.157731082679119,0,0,0.340173160604279,0.695036658406197,0,0.319984845586813,0,0,0.86152399231815,0.861884930743556,0.380046838912748,0.504060259519861,0.221730510655305,0.635030673459631,0.61506478758457,0,1.1554064790051,0,0.612508068787107,0.418531630736908,0,0,0,0,0.485510353031154,0.251793635951155,0.304130793658544,0.367093504323363,0.782391344348039,1.30815093828268,1.09843091367236,0.972149495371417,0.419959264876088,0,1.00669563634642,0,0.672187598284928,0.514518872071894,0.85960031981627,0,5.26022798234954,5.81890077199236,3.1691570175309,0,0,0,0,1.4209602298922,0.898800331555214,0,1.24427534770173,1.35005938331691,1.05162480675691,2.28520787523043,1.98781686856452,1.10241719293459,2.30029130443767,0.919218786610021,0,1.0214987046815,0.768032666281217,3.69281605644543,2.65314166446988,1.56274011167028,0.558365998002762,0,1.22238598221448,2.06240009831567,1.70846016958924,0.931997229126503,0.151452386666368,0.0755715601067855,0.579728977403356,0,0.679971333707751,0,0,0.448026887097336,0.280888840263504,0.511290967734173,0,0,1.12674735821344,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0.517875767294343,0.445326417194474,1.04091196059682,0,0.461230994512117,0.301445281105245,0.705532242814229,0.376999773989026,0.494389935468748,0.433798070759735,0,0.647067399789637,0.441683036920787,0.969750506270444,0,0,0.83778682725382,0.766371165625774,0.359445373517761,0.599902730993408,0,1.04853447583376,0,1.13088916901578,0.695297280769106,1.53429274398198,0.62336413367868,1.78465389374533,1.32391173005411,0.622034853050465,1.26361379216837,0.420883711772948,1.43132487258974,1.60931473103431,0.540186389416048,1.9591626318643,1.29269348387523,2.562274405697,1.87403449119458,1.81092359517311,1.29340795759705,0.756424320671277,0.703804496655795,1.31517439456545,0.278047249225598,0,1.02891068203972,1.79130840136644,0,0.257347907114715,0.284163499395593,1.24275463521301,0.469052119962192,0.540186184383045,0.473489471170421,0,0.617068451549513,0.697601834251224,0.536546802799238,0.467061369468678,0.987359099480883,0.820837320395476,0.486412857275134,0.292399974850665,0.219550115291051,0.671032093801859,1.68231958851302,1.3377599609307,0,0.528901133327089,1.2797295032114,1.16118335930219,0.515469845288373,0.201683524623343,0.667134131534611,0.570676878337677,0.474529061544512,0.164698954724011,1.25667604400135,1.79060824837036,0,0,0.216138049874694,0.597423819763102,1.51734320762465,1.14248512609729,0,1.01825663922657,0.775809948670503,1.33258057791605,1.20149420536089,0.442830443938806,0.784993639206874,0.493588655687202,0,0.667380422864376,0.786235980452812,1.12431056192427,0.811440485554012,0.482354319504834,0.50925170356284,0,0.486405680325106,0.274561413188081,0,1.86070473834252,0.624075346229121,0.252578877947112,0.179397413521912,0.964887042726734,0.369506380333209,1.51593129416388,0.651859905768103,0.848725428875941,0,0.670025029767263,0,0.780534591431195,0.945810864637146,0.8858587585951,1.11618338060241,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,0,0,0,0.642202359951168,0.234423373184406,0.655739781506702,0.252470927204373,0,0.780877488593277,1.07711698866399,0.477937595905104,0.668396022247182,0.566153061577665,1.21443210502468,0.292255857911312,1.58115111178609,1.28528526568723,0.99358059645788,1.24645922567079,1.46598263418218,0.329940245945071,0,1.94224508923985,0.906970670894253,0.754420319023592,0.885905678642318,0.307435147943927,1.03371317267288,0.727067458955011,2.13898427030833,0.632073515871632,0,0,0.340439605753788,1.08036656418786,2.32845630808958,2.14337035031592,1.24138163549592,2.14042581122485,1.97458824722545,1.522324745573,0.23467170806371,0,0.661585194164886,0.8244312647074,0.161464426695906,0.422190474497091,0.954978752025092,0.820704498725306,0.582961673259701,0.18542530201051,0.341741761595705,1.03193433981611,1.29636169158798,1.13021074202815,0.683471138605126,0.915112692826091,0.169978429993855,0.69975726161829,0.690999869022119,0.954670618015114,1.42351197111511,1.01659733563424,0.756037385752609,0.627264888043406,1.09181281873089,0.269728692769641,0.495920734352016,0.523511883968059,0.648074866458964,0,1.12738587736838,1.19613236835183,1.82004339502807,1.16670713006429,1.16243841129958,1.35164900392623,1.64300134104056,1.3020438484395,0.838874755405687,0.724752362478018,1.72818003754719,0.632022241256357,0.608175645870493,0.513554785824136,0.77952493786677,0.716106782669926,0.198681354781265,0.240390899039938,0.443068581523732,0.504832249740738,0.381034033274999,0.403304740547362,0.194915761479505,0.769694733122636,0.116876902181569,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,0.386379188064381,0.187682475451182,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|short_description=p4@U2af2
}}

Revision as of 13:31, 14 September 2013

Short description:p4@U2af2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_U2af2_5end
Coexpression cluster:NA
Association with transcript: -380bp_to_ENSMUST00000005041, NM_001205231, NM_133671_5end
EntrezGene:U2af2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@U2af2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.84e-0923
neuroblast (sensu Vertebrata)9.84e-0923
neuron1.36e-0733
neuronal stem cell1.36e-0733
neuroblast1.36e-0733
electrically signaling cell1.36e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm5.91e-1064
neural plate5.91e-1064
presumptive neural plate5.91e-1064
pre-chordal neural plate7.24e-1049
ecto-epithelium1.22e-0873
ectoderm-derived structure3.74e-0895
ectoderm3.74e-0895
presumptive ectoderm3.74e-0895
central nervous system8.36e-0873
nervous system2.60e-0775
neural tube4.27e-0752
neural rod4.27e-0752
future spinal cord4.27e-0752
neural keel4.27e-0752
regional part of nervous system4.90e-0754







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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