FFCP PHASE1:Mm9::chr7:58877250..58877261,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=140919|HGNC=|MCL_coexpression_id=159|UniProt=Q8BLE7|association_with_transcript=50bp_to_ENSMUST00000032710,NM_080853,uc009hcf.2_5end|description=CAGE_peak_9_at_Slc17a6_5end|id=chr7:58877250..58877261,+|ontology_enrichment_celltype=CL:0000117!2.27e-25!23;CL:0000337!2.27e-25!23;CL:0000540!2.29e-15!33;CL:0000047!2.29e-15!33;CL:0000031!2.29e-15!33;CL:0000404!2.29e-15!33;CL:0002319!4.54e-12!43;CL:0000393!6.84e-12!39;CL:0000211!6.84e-12!39;CL:0000221!1.27e-11!44;CL:0000133!1.27e-11!44;CL:0000055!2.37e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.46e-45,23;CL:0000337,1.46e-45,23;CL:0000540,5.41e-31,33;CL:0000047,5.41e-31,33;CL:0000031,5.41e-31,33;CL:0000404,5.41e-31,33;CL:0000393,7.88e-26,39;CL:0000211,7.88e-26,39;CL:0002319,3.47e-23,43;CL:0000221,1.34e-22,44;CL:0000133,1.34e-22,44;CL:0002613,4.44e-14,3;CL:0002610,5.99e-14,3;CL:0002614,6.61e-14,3;CL:0002612,9.82e-14,3;CL:0002321,3.26e-13,70;CL:0000723,1.57e-09,91;CL:0000048,1.57e-09,91;CL:0000034,9.07e-09,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.56e-19!52;UBERON:0005068!4.56e-19!52;UBERON:0006241!4.56e-19!52;UBERON:0007135!4.56e-19!52;UBERON:0000073!6.25e-19!75;UBERON:0001016!6.25e-19!75;UBERON:0001017!9.93e-18!73;UBERON:0005743!9.93e-18!73;UBERON:0002616!2.58e-16!49;UBERON:0000955!8.47e-16!50;UBERON:0006238!8.47e-16!50;UBERON:0002020!3.89e-15!34;UBERON:0002346!1.03e-14!71;UBERON:0003075!1.03e-14!71;UBERON:0007284!1.03e-14!71;UBERON:0000033!3.28e-14!63;UBERON:0004121!1.34e-13!102;UBERON:0000924!1.34e-13!102;UBERON:0006601!1.34e-13!102;UBERON:0003056!3.12e-11!49;UBERON:0003080!4.40e-11!40;UBERON:0002420!1.11e-10!8;UBERON:0007245!1.11e-10!8;UBERON:0010009!1.11e-10!8;UBERON:0010011!1.11e-10!8;UBERON:0000454!1.11e-10!8;UBERON:0002791!3.15e-10!29;UBERON:0003528!3.15e-10!29;UBERON:0001893!3.15e-10!29;UBERON:0002780!3.45e-10!39;UBERON:0001890!3.45e-10!39;UBERON:0006240!3.45e-10!39;UBERON:0003076!9.08e-10!12;UBERON:0003057!9.08e-10!12;UBERON:0002298!5.09e-09!6;UBERON:0002240!1.74e-08!6;UBERON:0005174!1.74e-08!6;UBERON:0001137!1.74e-08!6;UBERON:0007811!2.04e-08!86;UBERON:0001948!2.05e-07!5;UBERON:0002315!2.05e-07!5;UBERON:0000153!6.42e-07!94;UBERON:0000369!7.78e-07!5;UBERON:0002435!7.78e-07!5;UBERON:0000204!7.78e-07!5;UBERON:0010082!7.78e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.84e-26,54;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0002420,1.20e-19,8;UBERON:0007245,1.20e-19,8;UBERON:0010009,1.20e-19,8;UBERON:0010011,1.20e-19,8;UBERON:0000454,1.20e-19,8;UBERON:0002020,3.61e-19,34;UBERON:0001049,2.22e-18,52;UBERON:0005068,2.22e-18,52;UBERON:0006241,2.22e-18,52;UBERON:0007135,2.22e-18,52;UBERON:0002950,7.95e-18,4;UBERON:0001891,7.95e-18,4;UBERON:0009616,7.95e-18,4;UBERON:0010286,7.95e-18,4;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002346,1.96e-14,64;UBERON:0003075,1.96e-14,64;UBERON:0007284,1.96e-14,64;UBERON:0001948,5.80e-14,5;UBERON:0002315,5.80e-14,5;UBERON:0004684,5.99e-14,3;UBERON:0002275,5.99e-14,3;UBERON:0002038,6.61e-14,3;UBERON:0009663,6.61e-14,3;UBERON:0009661,6.61e-14,3;UBERON:0000125,6.61e-14,3;UBERON:0002308,6.61e-14,3;UBERON:0002257,9.82e-14,3;UBERON:0010371,2.53e-12,73;UBERON:0003076,3.08e-12,12;UBERON:0003057,3.08e-12,12;UBERON:0002240,1.15e-11,6;UBERON:0005174,1.15e-11,6;UBERON:0001137,1.15e-11,6;UBERON:0002616,2.34e-11,46;UBERON:0000955,4.50e-11,47;UBERON:0006238,4.50e-11,47;UBERON:0003528,1.05e-10,29;UBERON:0002791,1.05e-10,29;UBERON:0001893,1.05e-10,29;UBERON:0010314,3.26e-09,92;UBERON:0003080,3.43e-09,40;UBERON:0001896,3.92e-09,2;UBERON:0002298,3.92e-09,2;UBERON:0005290,3.92e-09,2;UBERON:0010096,3.92e-09,2;UBERON:0000369,1.23e-08,5;UBERON:0002435,1.23e-08,5;UBERON:0000204,1.23e-08,5;UBERON:0010082,1.23e-08,5;UBERON:0002780,1.27e-07,39;UBERON:0001890,1.27e-07,39;UBERON:0006240,1.27e-07,39;UBERON:0003056,3.24e-07,49;UBERON:0000025,6.72e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,0.841299845405528,0.571301968807607,1.32521124570968,0.122490799214954,0.191690942036473,0,6.60695285996332,1.53224805702225,2.15049146558741,2.37395317914349,1.9212405156506,2.6045668527838,1.3959149950069,4.50210088025344,2.59757021220577,3.83017161115768,1.42371680799103,1.86399445825301,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,1.64769703345305,0.457500602818626,0.251308704225729,0.347648640384553,0,0.62336413367868,0.973447578406546,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.512454881139399,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|EntrezGene=140919 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt=Q8BLE7 | |||
|association_with_transcript=50bp_to_ENSMUST00000032710,NM_080853,uc009hcf.2_5end | |||
|description=CAGE_peak_9_at_Slc17a6_5end | |||
|id=chr7:58877250..58877261,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.27e-25!23;CL:0000337!2.27e-25!23;CL:0000540!2.29e-15!33;CL:0000047!2.29e-15!33;CL:0000031!2.29e-15!33;CL:0000404!2.29e-15!33;CL:0002319!4.54e-12!43;CL:0000393!6.84e-12!39;CL:0000211!6.84e-12!39;CL:0000221!1.27e-11!44;CL:0000133!1.27e-11!44;CL:0000055!2.37e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.46e-45,23;CL:0000337,1.46e-45,23;CL:0000540,5.41e-31,33;CL:0000047,5.41e-31,33;CL:0000031,5.41e-31,33;CL:0000404,5.41e-31,33;CL:0000393,7.88e-26,39;CL:0000211,7.88e-26,39;CL:0002319,3.47e-23,43;CL:0000221,1.34e-22,44;CL:0000133,1.34e-22,44;CL:0002613,4.44e-14,3;CL:0002610,5.99e-14,3;CL:0002614,6.61e-14,3;CL:0002612,9.82e-14,3;CL:0002321,3.26e-13,70;CL:0000723,1.57e-09,91;CL:0000048,1.57e-09,91;CL:0000034,9.07e-09,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.56e-19!52;UBERON:0005068!4.56e-19!52;UBERON:0006241!4.56e-19!52;UBERON:0007135!4.56e-19!52;UBERON:0000073!6.25e-19!75;UBERON:0001016!6.25e-19!75;UBERON:0001017!9.93e-18!73;UBERON:0005743!9.93e-18!73;UBERON:0002616!2.58e-16!49;UBERON:0000955!8.47e-16!50;UBERON:0006238!8.47e-16!50;UBERON:0002020!3.89e-15!34;UBERON:0002346!1.03e-14!71;UBERON:0003075!1.03e-14!71;UBERON:0007284!1.03e-14!71;UBERON:0000033!3.28e-14!63;UBERON:0004121!1.34e-13!102;UBERON:0000924!1.34e-13!102;UBERON:0006601!1.34e-13!102;UBERON:0003056!3.12e-11!49;UBERON:0003080!4.40e-11!40;UBERON:0002420!1.11e-10!8;UBERON:0007245!1.11e-10!8;UBERON:0010009!1.11e-10!8;UBERON:0010011!1.11e-10!8;UBERON:0000454!1.11e-10!8;UBERON:0002791!3.15e-10!29;UBERON:0003528!3.15e-10!29;UBERON:0001893!3.15e-10!29;UBERON:0002780!3.45e-10!39;UBERON:0001890!3.45e-10!39;UBERON:0006240!3.45e-10!39;UBERON:0003076!9.08e-10!12;UBERON:0003057!9.08e-10!12;UBERON:0002298!5.09e-09!6;UBERON:0002240!1.74e-08!6;UBERON:0005174!1.74e-08!6;UBERON:0001137!1.74e-08!6;UBERON:0007811!2.04e-08!86;UBERON:0001948!2.05e-07!5;UBERON:0002315!2.05e-07!5;UBERON:0000153!6.42e-07!94;UBERON:0000369!7.78e-07!5;UBERON:0002435!7.78e-07!5;UBERON:0000204!7.78e-07!5;UBERON:0010082!7.78e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.84e-26,54;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0002420,1.20e-19,8;UBERON:0007245,1.20e-19,8;UBERON:0010009,1.20e-19,8;UBERON:0010011,1.20e-19,8;UBERON:0000454,1.20e-19,8;UBERON:0002020,3.61e-19,34;UBERON:0001049,2.22e-18,52;UBERON:0005068,2.22e-18,52;UBERON:0006241,2.22e-18,52;UBERON:0007135,2.22e-18,52;UBERON:0002950,7.95e-18,4;UBERON:0001891,7.95e-18,4;UBERON:0009616,7.95e-18,4;UBERON:0010286,7.95e-18,4;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002346,1.96e-14,64;UBERON:0003075,1.96e-14,64;UBERON:0007284,1.96e-14,64;UBERON:0001948,5.80e-14,5;UBERON:0002315,5.80e-14,5;UBERON:0004684,5.99e-14,3;UBERON:0002275,5.99e-14,3;UBERON:0002038,6.61e-14,3;UBERON:0009663,6.61e-14,3;UBERON:0009661,6.61e-14,3;UBERON:0000125,6.61e-14,3;UBERON:0002308,6.61e-14,3;UBERON:0002257,9.82e-14,3;UBERON:0010371,2.53e-12,73;UBERON:0003076,3.08e-12,12;UBERON:0003057,3.08e-12,12;UBERON:0002240,1.15e-11,6;UBERON:0005174,1.15e-11,6;UBERON:0001137,1.15e-11,6;UBERON:0002616,2.34e-11,46;UBERON:0000955,4.50e-11,47;UBERON:0006238,4.50e-11,47;UBERON:0003528,1.05e-10,29;UBERON:0002791,1.05e-10,29;UBERON:0001893,1.05e-10,29;UBERON:0010314,3.26e-09,92;UBERON:0003080,3.43e-09,40;UBERON:0001896,3.92e-09,2;UBERON:0002298,3.92e-09,2;UBERON:0005290,3.92e-09,2;UBERON:0010096,3.92e-09,2;UBERON:0000369,1.23e-08,5;UBERON:0002435,1.23e-08,5;UBERON:0000204,1.23e-08,5;UBERON:0010082,1.23e-08,5;UBERON:0002780,1.27e-07,39;UBERON:0001890,1.27e-07,39;UBERON:0006240,1.27e-07,39;UBERON:0003056,3.24e-07,49;UBERON:0000025,6.72e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,0.841299845405528,0.571301968807607,1.32521124570968,0.122490799214954,0.191690942036473,0,6.60695285996332,1.53224805702225,2.15049146558741,2.37395317914349,1.9212405156506,2.6045668527838,1.3959149950069,4.50210088025344,2.59757021220577,3.83017161115768,1.42371680799103,1.86399445825301,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,1.64769703345305,0.457500602818626,0.251308704225729,0.347648640384553,0,0.62336413367868,0.973447578406546,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.512454881139399,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0.685082519770642,0,1.35004500046361,0,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0.729320151204882,0,0.367687016900028,0.666740183404846,0,0,0.505394423527595,0.50695859978048,0.377252682772152,0.280924522409647,0.128050304809739,0.402048282689293,0.952587382566147,0.231768651889711,0.578727661391115,0,0.735994600671987,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.29551344712669,0.409231043169689,0.464810523557898,0,0.749431733813838,0,0.644613162144895,0,0,0 | |||
|short_description=p9@Slc17a6 | |||
}} |
Revision as of 13:56, 14 September 2013
Short description: | p9@Slc17a6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Slc17a6_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 50bp_to_ENSMUST00000032710, NM_080853, uc009hcf.2_5end |
EntrezGene: | Slc17a6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.46e-45 | 23 |
neuroblast (sensu Vertebrata) | 1.46e-45 | 23 |
neuron | 5.41e-31 | 33 |
neuronal stem cell | 5.41e-31 | 33 |
neuroblast | 5.41e-31 | 33 |
electrically signaling cell | 5.41e-31 | 33 |
electrically responsive cell | 7.88e-26 | 39 |
electrically active cell | 7.88e-26 | 39 |
neural cell | 3.47e-23 | 43 |
ectodermal cell | 1.34e-22 | 44 |
neurectodermal cell | 1.34e-22 | 44 |
striatum neuron | 4.44e-14 | 3 |
raphe nuclei neuron | 5.99e-14 | 3 |
neuron of the substantia nigra | 6.61e-14 | 3 |
neuron of the ventral spinal cord | 9.82e-14 | 3 |
embryonic cell | 3.26e-13 | 70 |
somatic stem cell | 1.57e-09 | 91 |
multi fate stem cell | 1.57e-09 | 91 |
stem cell | 9.07e-09 | 97 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.