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FFCP PHASE1:Mm9::chr8:131209646..131209682,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16412|HGNC=|MCL_coexpression_id=1823|UniProt=D6RJL5|association_with_transcript=0bp_to_ENSMUST00000124826_5end|description=CAGE_peak_1_at_Itgb1_5end|id=chr8:131209646..131209682,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!3.16e-12!23;UBERON:0001009!3.16e-12!23;UBERON:0004872!2.44e-11!33;UBERON:0007100!8.06e-10!18;UBERON:0000948!8.06e-10!18;UBERON:0005498!8.06e-10!18;UBERON:0004140!8.06e-10!18;UBERON:0009881!8.06e-10!18;UBERON:0004141!8.06e-10!18;UBERON:0003084!8.06e-10!18;UBERON:0007005!8.06e-10!18;UBERON:0004139!8.06e-10!18;UBERON:0004291!8.06e-10!18;UBERON:0005178!6.28e-09!17;UBERON:0005181!6.28e-09!17;UBERON:0002224!6.28e-09!17;UBERON:0000915!6.28e-09!17;UBERON:0008947!6.28e-09!17;UBERON:0003258!6.28e-09!17;UBERON:0003914!8.84e-08!47;UBERON:0002048!3.58e-07!14;UBERON:0000117!3.58e-07!14;UBERON:0000171!3.58e-07!14;UBERON:0000170!3.58e-07!14;UBERON:0005597!3.58e-07!14;UBERON:0000118!3.58e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.16e-12,23;UBERON:0001009,3.16e-12,23;UBERON:0004872,2.44e-11,33;UBERON:0007100,8.06e-10,18;UBERON:0000948,8.06e-10,18;UBERON:0005498,8.06e-10,18;UBERON:0004140,8.06e-10,18;UBERON:0009881,8.06e-10,18;UBERON:0004141,8.06e-10,18;UBERON:0003084,8.06e-10,18;UBERON:0007005,8.06e-10,18;UBERON:0004139,8.06e-10,18;UBERON:0004291,8.06e-10,18;UBERON:0005178,6.28e-09,17;UBERON:0005181,6.28e-09,17;UBERON:0002224,6.28e-09,17;UBERON:0000915,6.28e-09,17;UBERON:0008947,6.28e-09,17;UBERON:0003258,6.28e-09,17;UBERON:0003914,8.84e-08,47;UBERON:0002048,3.58e-07,14;UBERON:0000117,3.58e-07,14;UBERON:0000171,3.58e-07,14;UBERON:0000170,3.58e-07,14;UBERON:0005597,3.58e-07,14;UBERON:0000118,3.58e-07,14;UBERON:0005157,6.22e-07,20|phase1_expression=58.294180346145,122.141392673776,126.489788550291,87.4121570676739,96.1719801496987,84.4432737716806,87.8383528639176,38.2205037387066,33.9300820385517,29.9602593692152,47.7698131349159,47.6239789202158,13.353656934634,12.9382195580116,108.926892113722,88.2792165819641,99.3377866941968,27.2874773034876,34.2786084014347,30.9804445812562,72.6269697890136,34.7518329203099,41.5307664730907,94.3955294481099,111.722319879712,118.866016571809,118.890310939905,100.409594431624,141.187400656086,129.039426437085,128.381965669421,27.9413496322238,30.1381745916439,47.5445043046316,45.9274075404527,49.0392203807552,45.5297664465083,30.1342774130574,34.3787551590472,48.6877081895632,34.1174263057988,30.7370468231301,33.5002143591496,155.482570199838,165.143020956589,218.420635072401,72.7623950243676,112.28295553593,136.205433295373,204.540253826146,175.262999874954,83.3764873316835,15.268217151254,38.4441935266013,31.2567233202492,504.485754066492,629.513967545449,530.110910861211,23.6710259205729,21.1596391708813,25.9870875437533,124.017098737302,129.837040232226,60.7432309164944,57.3542490288845,51.1545682761192,60.8188224352362,36.1165207002261,47.3861528249743,39.8267518078487,41.0133674635195,21.1381728458815,24.7372765865807,37.9721477566357,33.9292967404557,41.3648453974509,27.5289702498472,20.9407234459708,25.6522910537927,22.6844414895933,22.8719109006024,27.0874952689515,27.6391169011367,25.3243174514256,29.795658316478,33.2930301585245,37.8708670925614,31.6879057903011,302.980499526069,400.226982325536,283.487469950241,129.924005424189,88.3962733820076,66.3834925714515,142.950811838487,132.167931693714,80.7555415757573,206.561550964606,153.01395671109,170.309674913984,64.0837559983896,336.215370825513,529.994898589823,803.505374563264,264.768543156715,255.640104264374,268.43348030285,100.253446393335,95.8070169494535,113.112909967396,77.7214263912289,84.032472014151,120.150674070406,110.479695525072,123.585731199626,135.59425204472,163.643068640156,177.712609654571,78.7303391235388,161.11978254762,108.212344045593,115.885185499318,95.0597982212423,17.5668478206928,19.2690970268379,106.014677911565,50.8016127905102,29.9951365496704,42.6955962965497,22.1690146319138,14.640019290196,23.9999812535571,19.8159725019195,25.3158302757027,21.1943805450751,27.0942909323155,134.937157101669,109.726948078102,81.3767282156433,73.0233239926065,53.8698633865593,56.3260155862009,67.523298677006,71.1326740184575,66.7438056674526,57.2668329673279,60.6250157901446,60.7952921236687,56.4788141484047,73.7513712654495,71.2602052863993,96.6653180005605,81.7458912723258,100.296623958384,112.974392887961,73.2446101892055,26.6841011179029,29.0803135039628,32.3946389310976,149.959059315703,138.135849328866,154.31318667209,148.438949211927,159.379027715397,152.41590753273,172.772720949553,189.669294789531,258.751998685648,206.687171491331,200.612641104654,215.156620534701,173.539385073869,180.909294999826,217.414398391802,14.0894265537965,33.1352851861296,120.272437006102,108.95363346538,81.4761117044594,104.970975680918,110.697149275678,103.261964607151,115.414204755488,129.35342575654,110.565271339871,129.618077367797,135.7210127521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|EntrezGene=16412
|HGNC=
|MCL_coexpression_id=1823
|UniProt=D6RJL5
|association_with_transcript=0bp_to_ENSMUST00000124826_5end
|description=CAGE_peak_1_at_Itgb1_5end
|id=chr8:131209646..131209682,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!3.16e-12!23;UBERON:0001009!3.16e-12!23;UBERON:0004872!2.44e-11!33;UBERON:0007100!8.06e-10!18;UBERON:0000948!8.06e-10!18;UBERON:0005498!8.06e-10!18;UBERON:0004140!8.06e-10!18;UBERON:0009881!8.06e-10!18;UBERON:0004141!8.06e-10!18;UBERON:0003084!8.06e-10!18;UBERON:0007005!8.06e-10!18;UBERON:0004139!8.06e-10!18;UBERON:0004291!8.06e-10!18;UBERON:0005178!6.28e-09!17;UBERON:0005181!6.28e-09!17;UBERON:0002224!6.28e-09!17;UBERON:0000915!6.28e-09!17;UBERON:0008947!6.28e-09!17;UBERON:0003258!6.28e-09!17;UBERON:0003914!8.84e-08!47;UBERON:0002048!3.58e-07!14;UBERON:0000117!3.58e-07!14;UBERON:0000171!3.58e-07!14;UBERON:0000170!3.58e-07!14;UBERON:0005597!3.58e-07!14;UBERON:0000118!3.58e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.16e-12,23;UBERON:0001009,3.16e-12,23;UBERON:0004872,2.44e-11,33;UBERON:0007100,8.06e-10,18;UBERON:0000948,8.06e-10,18;UBERON:0005498,8.06e-10,18;UBERON:0004140,8.06e-10,18;UBERON:0009881,8.06e-10,18;UBERON:0004141,8.06e-10,18;UBERON:0003084,8.06e-10,18;UBERON:0007005,8.06e-10,18;UBERON:0004139,8.06e-10,18;UBERON:0004291,8.06e-10,18;UBERON:0005178,6.28e-09,17;UBERON:0005181,6.28e-09,17;UBERON:0002224,6.28e-09,17;UBERON:0000915,6.28e-09,17;UBERON:0008947,6.28e-09,17;UBERON:0003258,6.28e-09,17;UBERON:0003914,8.84e-08,47;UBERON:0002048,3.58e-07,14;UBERON:0000117,3.58e-07,14;UBERON:0000171,3.58e-07,14;UBERON:0000170,3.58e-07,14;UBERON:0005597,3.58e-07,14;UBERON:0000118,3.58e-07,14;UBERON:0005157,6.22e-07,20
|phase1_expression=58.294180346145,122.141392673776,126.489788550291,87.4121570676739,96.1719801496987,84.4432737716806,87.8383528639176,38.2205037387066,33.9300820385517,29.9602593692152,47.7698131349159,47.6239789202158,13.353656934634,12.9382195580116,108.926892113722,88.2792165819641,99.3377866941968,27.2874773034876,34.2786084014347,30.9804445812562,72.6269697890136,34.7518329203099,41.5307664730907,94.3955294481099,111.722319879712,118.866016571809,118.890310939905,100.409594431624,141.187400656086,129.039426437085,128.381965669421,27.9413496322238,30.1381745916439,47.5445043046316,45.9274075404527,49.0392203807552,45.5297664465083,30.1342774130574,34.3787551590472,48.6877081895632,34.1174263057988,30.7370468231301,33.5002143591496,155.482570199838,165.143020956589,218.420635072401,72.7623950243676,112.28295553593,136.205433295373,204.540253826146,175.262999874954,83.3764873316835,15.268217151254,38.4441935266013,31.2567233202492,504.485754066492,629.513967545449,530.110910861211,23.6710259205729,21.1596391708813,25.9870875437533,124.017098737302,129.837040232226,60.7432309164944,57.3542490288845,51.1545682761192,60.8188224352362,36.1165207002261,47.3861528249743,39.8267518078487,41.0133674635195,21.1381728458815,24.7372765865807,37.9721477566357,33.9292967404557,41.3648453974509,27.5289702498472,20.9407234459708,25.6522910537927,22.6844414895933,22.8719109006024,27.0874952689515,27.6391169011367,25.3243174514256,29.795658316478,33.2930301585245,37.8708670925614,31.6879057903011,302.980499526069,400.226982325536,283.487469950241,129.924005424189,88.3962733820076,66.3834925714515,142.950811838487,132.167931693714,80.7555415757573,206.561550964606,153.01395671109,170.309674913984,64.0837559983896,336.215370825513,529.994898589823,803.505374563264,264.768543156715,255.640104264374,268.43348030285,100.253446393335,95.8070169494535,113.112909967396,77.7214263912289,84.032472014151,120.150674070406,110.479695525072,123.585731199626,135.59425204472,163.643068640156,177.712609654571,78.7303391235388,161.11978254762,108.212344045593,115.885185499318,95.0597982212423,17.5668478206928,19.2690970268379,106.014677911565,50.8016127905102,29.9951365496704,42.6955962965497,22.1690146319138,14.640019290196,23.9999812535571,19.8159725019195,25.3158302757027,21.1943805450751,27.0942909323155,134.937157101669,109.726948078102,81.3767282156433,73.0233239926065,53.8698633865593,56.3260155862009,67.523298677006,71.1326740184575,66.7438056674526,57.2668329673279,60.6250157901446,60.7952921236687,56.4788141484047,73.7513712654495,71.2602052863993,96.6653180005605,81.7458912723258,100.296623958384,112.974392887961,73.2446101892055,26.6841011179029,29.0803135039628,32.3946389310976,149.959059315703,138.135849328866,154.31318667209,148.438949211927,159.379027715397,152.41590753273,172.772720949553,189.669294789531,258.751998685648,206.687171491331,200.612641104654,215.156620534701,173.539385073869,180.909294999826,217.414398391802,14.0894265537965,33.1352851861296,120.272437006102,108.95363346538,81.4761117044594,104.970975680918,110.697149275678,103.261964607151,115.414204755488,129.35342575654,110.565271339871,129.618077367797,135.721012752146,155.186048192098,161.430264134631,121.34062016832,133.789452872436,129.441827615339,47.9859789411297,88.4283487599301,113.834813029811,113.841092265531,103.570628147512,128.629093678844,143.989595031934,117.202457495804,124.970987361734,125.865107200237,101.683251090892,70.5754797179078,75.47865412347,63.1862535801439,78.5068669773506,78.1413997597831,74.8600004237374,102.132128795038,76.5278270378167,98.0184245081451,102.075426634422,110.525861457546,97.979829357972,117.954336001301,113.917357586414,93.5940431444932,223.920866481925,99.1040083559635,127.275646601222,127.308814331391,135.181583014177,178.729176690417,197.576221935391,272.991973353061,305.339274133692,298.755866336197,327.520094822478,230.555683805043,258.854787816977,258.777165802324,168.886238011985,231.70382130677,84.0916906862552,104.580026849494,25.2064426280833,32.4676371860403,137.049614334901,117.651452077238,149.235387783889,156.175497718655,132.916236401137,166.800220970881,173.337368436103,179.187443989331,148.565527514686,151.096278540148,167.602017849326,17.9939937196212,128.881597369108,84.403096138279,122.165219515182,124.222502598319,61.0627636363829,61.4235009472103,64.6972411904567,68.6522490311469,62.6040012907238,110.36921811187,104.405030439961,84.3398252387813,85.2028734339484,85.0138878847345,100.147678146249,102.104187815705,83.0672638039243,67.8830324498039,41.0067027591332,71.1598956304886,62.9557829430071,82.5847625497587,75.8570984975778,50.8456465021381,195.012189400943,257.587798170405,78.5081097075664,81.1240364472082,141.442837785613,124.003373652288,77.5920236020387,68.9391778929257,120.673066364758,32.2640025498287,81.16366837898,119.910770286632,113.709439805003,84.2007002810969,84.2036442761515,78.4709134098373,56.7727956179477,49.6827655748986,45.0531914602422,84.9656850033451,93.1609501096444,114.87549892667,132.198537165885,125.034801016652,126.868649536529,167.366653863563,185.061087369027,137.421869541616,157.482192549528,72.0753603180834,9.58277995763124,83.1311996004522,81.2401188144349,97.4200453603679,98.936424783942,104.752797804282,97.758579791913,102.731259641877,78.5396489748574,49.0415765276792,46.6608610137742,60.9901462812384,56.3576098506656,53.4096977257102,54.8265872966295,58.1836760919315,55.0347352744104,40.8664528367894,48.7375439676105,51.8967552733479,46.1051180262749,46.178392792673,51.8475925535483,46.8551668788404,44.6469766333593,87.0644673082412,155.834139268593,156.730107496754,196.425001145972,238.97552781782,293.910756556551,143.95717667407,100.110033029924,102.320709223214,20.3310663342144,26.2385384809091,28.0718801585304,30.5898664571764,28.773465830367,27.9495742034189,29.7009900101995,18.0128481289688,25.3759749031155,21.2281727818246,27.8150091525593,96.1649944896485,65.9031718210958,91.6512323347469,40.2457272245726,50.5569648237539,99.7887807829252,112.083071137958,119.702865177747,109.923287117252,111.530891951705,106.008003858975,116.490035292534,114.92514856674,115.043244318093,111.929017451522,132.571668880915,140.437912497577,133.103745959468,124.5302864337,103.20364496801,116.424128840525,123.986818772607,123.108414887582,123.283288344083,128.106516347998,110.8543515609,120.74899754997,118.1495790459,116.71759250481,137.497986005918,135.640672231151,108.036995396798,118.371746666078,108.992235204345,68.4480983549972,111.58537722846,101.634008564845,108.077907618897,127.722431670199,122.658085043203
|short_description=p1@Itgb1
}}

Revision as of 15:13, 14 September 2013

Short description:p1@Itgb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Itgb1_5end
Coexpression cluster:MCL_coexpression_mm9:1823
Association with transcript: 0bp_to_ENSMUST00000124826_5end
EntrezGene:Itgb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Itgb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G758.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5122.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6126.49
CD326+ enterocyte, pool1.CNhs13542.11848-124I387.41
CD326+ enterocyte, pool2.CNhs13197.11849-124I496.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I784.44
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I887.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E938.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E733.93
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F229.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E647.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F147.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.35
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.94
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1108.93
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A388.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A599.34
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.29
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A434.28
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A372.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H234.75
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I941.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D194.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2111.72
GP2+ M cell, pool1.CNhs13228.11845-124H9118.87
GP2+ M cell, pool2.CNhs13231.11846-124I1118.89
GP2+ M cell, pool3.CNhs13240.11847-124I2100.41
Ileum epithelium, pool1.CNhs13199.10252-104B9141.19
Ileum epithelium, pool2.CNhs13232.10253-104C1129.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8128.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I327.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G630.14
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F545.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F649.04
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F745.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G830.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H134.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H348.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G934.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8155.48
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9165.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3218.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B772.76
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2112.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8136.21
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3204.54
Mouse Astrocytes, donor2.CNhs12078.11552-120C4175.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C483.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I938.44
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A131.26
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1504.49
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1629.51
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5530.11
Mouse Granule cells, donor1.CNhs12131.11713-123C323.67
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C725.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6124.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1129.84
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C760.74
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E757.35
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D251.15
Mouse Microglia, donor1.CNhs12629.11718-123C860.82
Mouse Microglia, donor2.CNhs12634.11736-123E836.12
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D547.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F539.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D941.01
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D237.97
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F233.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D641.36
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.65
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D827.09
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.64
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.80
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F637.87
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.69
Mouse Schwann, donor1.CNhs12507.11728-123D9302.98
Mouse Schwann, donor2.CNhs12573.11746-123F9400.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3283.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7129.92
Mouse hepatocyte, donor1.CNhs13078.11714-123C488.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C866.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F4142.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F6132.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A780.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7206.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3153.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8170.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G664.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1336.22
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8529.99
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6803.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1264.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2255.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3268.43
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6100.25
accessory axillary lymph node, adult.CNhs10475.1063-29H995.81
adrenal gland, adult.CNhs10508.49-24D7113.11
adrenal gland, embryo E14.CNhs11038.406-44C577.72
adrenal gland, embryo E16.CNhs11004.1254-43D684.03
adrenal gland, embryo E17.CNhs11043.1263-45I1120.15
adrenal gland, embryo E18.CNhs11026.1262-18F5110.48
adrenal gland, neonate N00.CNhs11191.1311-23C1123.59
adrenal gland, neonate N25.CNhs11223.1377-27I3135.59
amnion, adult pregnant day17.5.CNhs10488.583-22A8163.64
aorta, adult.CNhs10498.46-23H1177.71
bone (os femoris), adult.CNhs10483.56-12G278.73
bone (os femoris), neonate N02.CNhs11227.1985-43F5161.12
bone (os femoris), neonate N16.CNhs11225.1525-43A6108.21
bone (os femoris), neonate N20.CNhs11195.1350-25C3115.89
cecum, adult.CNhs10467.37-13H495.06
cerebellum, adult.CNhs10494.15-8B217.57
cerebellum, neonate N30.CNhs11135.1395-42I219.27
colon, adult.CNhs10468.36-18H7106.01
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C750.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D130.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D442.70
corpora quadrigemina, adult.CNhs10501.16-22A422.17
corpus striatum, adult.CNhs10487.19-21D814.64
corpus striatum, neonate N00.CNhs11226.630-43F124.00
cortex, adult.CNhs10473.12-14D519.82
cortex, neonate N30.CNhs11107.1392-42F225.32
diencephalon, adult.CNhs10482.20-12F221.19
diencephalon, neonate N30.CNhs11201.1388-42B227.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1134.94
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2109.73
epididymis, adult.CNhs10490.58-23B281.38
eyeball, adult.CNhs10484.31-12G473.02
eyeball, embryo E12.CNhs11016.345-16C653.87
eyeball, embryo E14.CNhs10521.399-16E256.33
eyeball, embryo E15.CNhs10593.426-16C967.52
eyeball, embryo E17.CNhs11023.1261-18D471.13
eyeball, neonate N00.CNhs11207.633-15C666.74
eyeball, neonate N01.CNhs11140.1532-43E757.27
eyeball, neonate N02.CNhs11205.1551-44G860.63
eyeball, neonate N16.CNhs11188.777-19A260.80
forelimb, embryo E11.CNhs10596.335-25E256.48
forelimb, embryo E12.CNhs10600.359-14H273.75
forelimb, embryo E13.CNhs10589.384-1E271.26
forelimb, embryo E14.CNhs10577.413-26A896.67
forelimb, embryo E15.CNhs11007.437-20E781.75
forelimb, embryo E17.CNhs10598.1517-43C4100.30
forelimb, embryo E18.CNhs11008.1520-43B5112.97
gonad, embryo E13.CNhs11044.1564-45I673.24
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D229.08
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D532.39
heart, embryo E11.CNhs10586.331-24E9149.96
heart, embryo E12.CNhs11015.353-12F5138.14
heart, embryo E13.CNhs11013.376-3I9154.31
heart, embryo E14.CNhs10597.403-26D4148.44
heart, embryo E15.CNhs11017.431-16C8159.38
heart, embryo E16.CNhs11021.457-17C6152.42
heart, embryo E17.CNhs11025.479-18E5172.77
heart, embryo E18.CNhs11030.1283-20G3189.67
heart, neonate N00.CNhs11213.639-21E3258.75
heart, neonate N03.CNhs11221.1349-25I2206.69
heart, neonate N10.CNhs11118.749-24G1200.61
heart, neonate N16.CNhs11209.782-15G1215.16
heart, neonate N20.CNhs11127.821-26I6173.54
heart, neonate N25.CNhs11196.1351-25D3180.91
heart, neonate N30.CNhs11202.1390-42D2217.41
hippocampus, adult.CNhs10478.13-16E814.09
hippocampus, neonate N00.CNhs11228.627-43G133.14
intestinal mucosa, adult.CNhs10506.860-29I3120.27
intestine, adult.CNhs10496.178-9A3108.95
intestine, embryo E12.CNhs11019.1251-16I581.48
intestine, embryo E13.CNhs11010.381-16D5104.97
intestine, embryo E15.CNhs10602.976-16D8110.70
intestine, embryo E16.CNhs10585.463-22H4103.26
intestine, embryo E17.CNhs10582.482-18D3115.41
intestine, embryo E18.CNhs10526.1289-20F7129.35
intestine, neonate N00.CNhs11126.644-26D1110.57
intestine, neonate N01.CNhs11192.1322-23E9129.62
intestine, neonate N06.CNhs11102.688-20B8135.72
intestine, neonate N07.CNhs11095.720-20F2155.19
intestine, neonate N10.CNhs11098.755-23A5161.43
intestine, neonate N20.CNhs11187.827-18D1121.34
intestine, neonate N25.CNhs11121.1352-25E3133.79
intestine, neonate N30.CNhs11131.1384-42G1129.44
kidney, embryo E14.CNhs10606.411-4I947.99
kidney, embryo E15.CNhs10997.434-16F888.43
kidney, embryo E16.CNhs10584.464-22A5113.83
kidney, embryo E17.CNhs11028.483-18I2113.84
kidney, embryo E18.CNhs11001.1288-20C7103.57
kidney, neonate N00.CNhs11214.646-21G7128.63
kidney, neonate N10.CNhs11206.758-6D5143.99
kidney, neonate N20.CNhs11113.832-19I1117.20
kidney, neonate N25.CNhs11122.1353-25F3124.97
kidney, neonate N30.CNhs11203.1385-42H1125.87
liver, adult pregnant day01.CNhs10466.508-5B2101.68
liver, embryo E12.CNhs10601.355-15F870.58
liver, embryo E13.CNhs10524.378-3H675.48
liver, embryo E14.CNhs10594.409-16E163.19
liver, embryo E15.CNhs10520.433-16D778.51
liver, embryo E16.CNhs10523.462-17F578.14
liver, embryo E17.CNhs10510.481-18A374.86
liver, embryo E18.CNhs10579.499-43G4102.13
liver, neonate N00.CNhs11117.641-24F476.53
liver, neonate N03.CNhs11123.1345-25G298.02
liver, neonate N06.CNhs11101.684-20A8102.08
liver, neonate N07.CNhs11103.716-20H2110.53
liver, neonate N10.CNhs11115.751-24B997.98
liver, neonate N20.CNhs11220.823-25A3117.95
liver, neonate N25.CNhs11198.1368-26H1113.92
liver, neonate N30.CNhs11106.1382-42D193.59
lung, adult.CNhs10474.28-22B1223.92
lung, embryo E12.CNhs10522.354-16G299.10
lung, embryo E14.CNhs10604.404-26F8127.28
lung, embryo E15.CNhs11020.432-17C5127.31
lung, embryo E16.CNhs10998.458-17B6135.18
lung, embryo E17.CNhs10605.480-44A6178.73
lung, embryo E18.CNhs10583.1287-20I6197.58
lung, neonate N00.CNhs11224.640-42C6272.99
lung, neonate N06.CNhs11212.683-20E5305.34
lung, neonate N07.CNhs11111.715-19A3298.76
lung, neonate N10.CNhs11219.750-23E6327.52
lung, neonate N20.CNhs11109.822-18A4230.56
lung, neonate N25.CNhs11119.1359-25C7258.85
lung, neonate N30.CNhs11133.1394-42H2258.78
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1168.89
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1231.70
mammary gland, adult lactating day02.CNhs10480.595-22B684.09
mammary gland, adult pregnant day19.CNhs10476.588-5H2104.58
medulla oblongata, adult.CNhs10477.17-12C225.21
medulla oblongata, neonate N30.CNhs11200.1396-42A332.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7137.05
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2117.65
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1149.24
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2156.18
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3132.92
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7166.80
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8173.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9179.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4148.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5151.10
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6167.60
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I7128.88
ovary, embryo E18.CNhs11040.505-44H784.40
ovary, neonate N00.CNhs11217.1299-22I4122.17
oviduct, adult pregnant day01.CNhs10500.988-6G6124.22
pancreas, adult.CNhs10486.34-16E461.06
pancreas, embryo E14.CNhs11012.405-44F461.42
pancreas, embryo E15.CNhs11042.1556-45F264.70
pancreas, embryo E16.CNhs11003.460-26E568.65
pancreas, embryo E17.CNhs10599.1558-45G362.60
pancreas, embryo E18.CNhs10580.1535-43I7110.37
pancreas, neonate N00.CNhs11105.645-26G9104.41
pancreas, neonate N01.CNhs11138.1531-43D784.34
pancreas, neonate N02.CNhs11139.1539-43D885.20
pancreas, neonate N16.CNhs11136.787-43B685.01
pancreas, neonate N25.CNhs11094.1555-45E2100.15
pancreas, neonate N30.CNhs11182.1548-44H5102.10
pituitary gland, adult.CNhs10493.21-1G883.07
pituitary gland, embryo E12.CNhs11018.346-16E667.88
pituitary gland, embryo E13.CNhs11009.370-44C741.01
pituitary gland, embryo E14.CNhs11037.398-44A571.16
pituitary gland, embryo E15.CNhs10592.427-16B962.96
pituitary gland, embryo E16.CNhs11036.449-43F682.58
pituitary gland, embryo E17.CNhs11039.1265-44F575.86
pituitary gland, neonate N00.CNhs11190.1308-22E950.85
placenta, adult pregnant day10.CNhs10472.539-13I7195.01
placenta, adult pregnant day17.CNhs10464.577-18G3257.59
prostate, adult.CNhs10470.859-1F878.51
skin, adult.CNhs10492.30-1C381.12
skin, neonate N00.CNhs11124.650-25G4141.44
skin, neonate N03.CNhs11215.662-22H3124.00
skin, neonate N06.CNhs11097.693-20I577.59
skin, neonate N10.CNhs11108.762-6C468.94
small intestine, neonate N16.CNhs11114.790-21I1120.67
spinal cord, adult.CNhs10505.24-13C932.26
spleen, adult.CNhs10465.25-2G281.16
spleen, embryo E16.CNhs11035.461-43C1119.91
spleen, embryo E18.CNhs11011.1271-21F2113.71
spleen, neonate N10.CNhs11116.752-24D184.20
spleen, neonate N20.CNhs11112.824-19H184.20
spleen, neonate N25.CNhs11099.1354-25G378.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C656.77
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C949.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D345.05
stomach, adult.CNhs10503.33-1H684.97
stomach, embryo E12.CNhs10588.356-43E393.16
stomach, embryo E15.CNhs10603.1252-16G8114.88
stomach, embryo E16.CNhs11022.459-17D4132.20
stomach, embryo E17.CNhs11006.1035-18D5125.03
stomach, embryo E18.CNhs10999.1286-20C6126.87
stomach, neonate N03.CNhs11193.1340-24B8167.37
stomach, neonate N07.CNhs11210.718-18A9185.06
stomach, neonate N25.CNhs11104.1355-25E4137.42
stomach, neonate N30.CNhs11134.1386-42I1157.48
submandibular gland, adult.CNhs10469.59-29C172.08
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F583.13
testis, embryo E15.CNhs11034.443-27C581.24
testis, embryo E16.CNhs11033.470-26G597.42
testis, embryo E17.CNhs11029.486-18I598.94
testis, embryo E18.CNhs11027.503-18G5104.75
testis, neonate N00.CNhs11189.1300-22B797.76
testis, neonate N07.CNhs11222.726-26I4102.73
testis, neonate N10.CNhs11204.763-44D978.54
testis, neonate N20.CNhs11110.839-18H349.04
testis, neonate N30.CNhs11130.1391-42E246.66
thymus, adult.CNhs10471.38-12B560.99
thymus, embryo E14.CNhs11041.402-44I456.36
thymus, embryo E15.CNhs11005.430-45I253.41
thymus, embryo E16.CNhs11002.456-26C554.83
thymus, embryo E17.CNhs10581.478-18C158.18
thymus, embryo E18.CNhs10595.1273-19G455.03
thymus, neonate N02.CNhs11181.1541-43F840.87
thymus, neonate N03.CNhs11137.2104-43C748.74
thymus, neonate N06.CNhs11197.681-26C451.90
thymus, neonate N07.CNhs11211.713-19D346.11
thymus, neonate N10.CNhs11194.748-24E446.18
thymus, neonate N20.CNhs11186.820-7A251.85
thymus, neonate N25.CNhs11125.1362-25G746.86
thymus, neonate N30.CNhs11132.1393-42G244.65
tongue, adult.CNhs10499.32-1B487.06
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3155.83
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7156.73
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5196.43
urinary bladder, adult.CNhs10481.879-12E4238.98
uterus, adult pregnant day19.CNhs10497.590-15F5293.91
uterus, adult.CNhs10509.92-27E5143.96
vagina, adult.CNhs10502.89-27D5100.11
vesicular gland, adult.CNhs10491.51-27F8102.32
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.95
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.23
whole body, embryo E11.CNhs11014.324-5I827.82
whole body, embryo E12.CNhs10587.857-27C996.16
whole body, embryo E13.CNhs10512.372-23H265.90
whole body, embryo E14.5.CNhs10578.420-27D291.65
whole body, embryo E14.CNhs10519.395-14B140.25
whole body, embryo E16.CNhs10514.453-14F250.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G599.79
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5112.08
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5119.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5109.92
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5111.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5106.01
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5116.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5114.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5115.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5111.93
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5132.57
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5140.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5133.10
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5124.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5103.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5116.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5123.99
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5123.11
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5123.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5128.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5110.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5120.75
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5118.15
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5116.72
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5137.50
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5135.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5108.04
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5118.37
whole body, embryo E17.5.CNhs10513.490-9F9108.99
whole body, embryo E17.CNhs10517.475-3I568.45
whole body, embryo E18.CNhs10516.493-3B3111.59
whole body, neonate N00.CNhs10525.657-19C2101.63
whole body, neonate N01.CNhs10576.659-23C6108.08
whole body, neonate N06.CNhs10515.692-21D1127.72
whole body, neonate N10.CNhs10518.761-6B4122.66





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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