FFCP PHASE1:Mm9::chr8:56040446..56040470,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=234267|HGNC=|MCL_coexpression_id=2|UniProt=P35802,Q542P2|association_with_transcript=365bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end|description=CAGE_peak_4_at_Gpm6a_5end|id=chr8:56040446..56040470,+|ontology_enrichment_celltype=CL:0000117!1.57e-17!23;CL:0000337!1.57e-17!23;CL:0000540!1.65e-10!33;CL:0000047!1.65e-10!33;CL:0000031!1.65e-10!33;CL:0000404!1.65e-10!33;CL:0002319!5.26e-08!43;CL:0000393!1.04e-07!39;CL:0000211!1.04e-07!39;CL:0000221!1.21e-07!44;CL:0000133!1.21e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.02e-19,23;CL:0000337,2.02e-19,23;CL:0000540,3.27e-11,33;CL:0000047,3.27e-11,33;CL:0000031,3.27e-11,33;CL:0000404,3.27e-11,33;CL:0000393,2.08e-08,39;CL:0000211,2.08e-08,39;CL:0002319,5.17e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.24e-34!63;UBERON:0001049!4.48e-34!52;UBERON:0005068!4.48e-34!52;UBERON:0006241!4.48e-34!52;UBERON:0007135!4.48e-34!52;UBERON:0000955!6.70e-33!50;UBERON:0006238!6.70e-33!50;UBERON:0002616!5.75e-32!49;UBERON:0002346!4.99e-31!71;UBERON:0003075!4.99e-31!71;UBERON:0007284!4.99e-31!71;UBERON:0003056!3.91e-30!49;UBERON:0000073!1.09e-29!75;UBERON:0001016!1.09e-29!75;UBERON:0001017!4.16e-29!73;UBERON:0005743!4.16e-29!73;UBERON:0002020!2.66e-26!34;UBERON:0003080!3.48e-26!40;UBERON:0002780!3.35e-25!39;UBERON:0001890!3.35e-25!39;UBERON:0006240!3.35e-25!39;UBERON:0004121!5.09e-25!102;UBERON:0000924!5.09e-25!102;UBERON:0006601!5.09e-25!102;UBERON:0002791!1.36e-22!29;UBERON:0003528!1.36e-22!29;UBERON:0001893!1.36e-22!29;UBERON:0007811!5.65e-20!86;UBERON:0000153!1.20e-16!94;UBERON:0000956!6.05e-16!21;UBERON:0001869!6.05e-16!21;UBERON:0000203!6.05e-16!21;UBERON:0002619!1.11e-12!17;UBERON:0002021!1.55e-11!10;UBERON:0000411!1.55e-11!10;UBERON:0001950!1.55e-11!10;UBERON:0003076!4.18e-08!12;UBERON:0003057!4.18e-08!12;UBERON:0002420!8.70e-08!8;UBERON:0007245!8.70e-08!8;UBERON:0010009!8.70e-08!8;UBERON:0010011!8.70e-08!8;UBERON:0000454!8.70e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.60e-31,54;UBERON:0002346,1.49e-29,64;UBERON:0003075,1.49e-29,64;UBERON:0007284,1.49e-29,64;UBERON:0001049,1.73e-29,52;UBERON:0005068,1.73e-29,52;UBERON:0006241,1.73e-29,52;UBERON:0007135,1.73e-29,52;UBERON:0002020,2.05e-29,34;UBERON:0001017,2.04e-25,73;UBERON:0003528,2.92e-25,29;UBERON:0002791,2.92e-25,29;UBERON:0001893,2.92e-25,29;UBERON:0000955,2.98e-25,47;UBERON:0006238,2.98e-25,47;UBERON:0002616,2.66e-24,46;UBERON:0001016,2.77e-24,75;UBERON:0003056,3.60e-24,49;UBERON:0010371,7.78e-24,73;UBERON:0003080,4.83e-22,40;UBERON:0004121,6.86e-22,95;UBERON:0000924,6.86e-22,95;UBERON:0006601,6.86e-22,95;UBERON:0002780,5.06e-21,39;UBERON:0001890,5.06e-21,39;UBERON:0006240,5.06e-21,39;UBERON:0000956,8.17e-18,21;UBERON:0001869,8.17e-18,21;UBERON:0000203,8.17e-18,21;UBERON:0010314,1.40e-15,92;UBERON:0002619,3.67e-14,17;UBERON:0002021,1.02e-12,10;UBERON:0000411,1.02e-12,10;UBERON:0001950,1.02e-12,10;UBERON:0002420,1.59e-08,8;UBERON:0007245,1.59e-08,8;UBERON:0010009,1.59e-08,8;UBERON:0010011,1.59e-08,8;UBERON:0000454,1.59e-08,8;UBERON:0003076,8.00e-08,12;UBERON:0003057,8.00e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3488311908182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,1.90149421051854,0,0,0,0,0,0,0,12.3390638647088,10.9354810048669,12.8298226424343,4.57041575046086,8.83474163806454,10.779190330916,6.61333750025831,4.5960939330501,20.9220173898839,33.4540825783192,32.4109785170674,8.17694983927202,10.5210790142771,11.4600941522487,20.9387249251036,34.3285192119325,44.1586936074981,15.0260578591571,17.3693450574906,8.38797506213853,0.075726193333184,0.151143120213571,0,0,0,0,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.2326267995473,40.2137677081834,0,0,0,0,56.0216991374037,66.7950880115195,16.712028831011,120.981726853824,115.071955798649,45.5055817585437,80.7961490077433,0,0,0,0.631325567659422,0.520481771850815,1.60931473103431,1.62055916824814,1.80845781402858,3.46986145671772,4.22775276940004,4.49768277886698,6.46758426847539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,125.33280934422,21.712873212029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4036896781444,28.7168632150898,0,0,0,0,0.215423397732799,0,0,0,0,0,0,24.0990987316355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76615448055303,0.540183282093931,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0,0,0,0,26.3303928854924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,118.033135106967,135.33561953311,106.558565499728,96.2377821124651,113.038615762156,130.683144248418,113.403780038943,106.275803960916,121.442165607767,115.460549520656,0.62272408550506,2.79317411380722,2.04880326904961,1.94485373654635,2.09613162627982,1.10306105070008,4.4449345560323,4.73880631649457,2.88827288632634,4.80124702351215,5.0695859978048,3.58390048633545,3.7456602987953,5.05798703998467,4.93945033018274,4.76293691283074,5.2147946675185,1.73618298417335,3.70877310722976,3.53277408322554,2.05721551431249,4.96932257246145,3.33810665926249,3.77900683244054,6.11710972699649,3.80765735512544,4.39027134894654,4.99832451731901,4.48153575691344,6.17256498823512,4.38949567059444,3.64466584789585,4.09231043169689,4.49316839439301,1.73615949883027,8.99318080576605,3.74290573512653,3.65280791882107,1.14772999241306,0.441182838239031,0.695603506861264|short_description=p4@Gpm6a}} | ||
|EntrezGene=234267 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=P35802,Q542P2 | |||
|association_with_transcript=365bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end | |||
|description=CAGE_peak_4_at_Gpm6a_5end | |||
|id=chr8:56040446..56040470,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.57e-17!23;CL:0000337!1.57e-17!23;CL:0000540!1.65e-10!33;CL:0000047!1.65e-10!33;CL:0000031!1.65e-10!33;CL:0000404!1.65e-10!33;CL:0002319!5.26e-08!43;CL:0000393!1.04e-07!39;CL:0000211!1.04e-07!39;CL:0000221!1.21e-07!44;CL:0000133!1.21e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.02e-19,23;CL:0000337,2.02e-19,23;CL:0000540,3.27e-11,33;CL:0000047,3.27e-11,33;CL:0000031,3.27e-11,33;CL:0000404,3.27e-11,33;CL:0000393,2.08e-08,39;CL:0000211,2.08e-08,39;CL:0002319,5.17e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.24e-34!63;UBERON:0001049!4.48e-34!52;UBERON:0005068!4.48e-34!52;UBERON:0006241!4.48e-34!52;UBERON:0007135!4.48e-34!52;UBERON:0000955!6.70e-33!50;UBERON:0006238!6.70e-33!50;UBERON:0002616!5.75e-32!49;UBERON:0002346!4.99e-31!71;UBERON:0003075!4.99e-31!71;UBERON:0007284!4.99e-31!71;UBERON:0003056!3.91e-30!49;UBERON:0000073!1.09e-29!75;UBERON:0001016!1.09e-29!75;UBERON:0001017!4.16e-29!73;UBERON:0005743!4.16e-29!73;UBERON:0002020!2.66e-26!34;UBERON:0003080!3.48e-26!40;UBERON:0002780!3.35e-25!39;UBERON:0001890!3.35e-25!39;UBERON:0006240!3.35e-25!39;UBERON:0004121!5.09e-25!102;UBERON:0000924!5.09e-25!102;UBERON:0006601!5.09e-25!102;UBERON:0002791!1.36e-22!29;UBERON:0003528!1.36e-22!29;UBERON:0001893!1.36e-22!29;UBERON:0007811!5.65e-20!86;UBERON:0000153!1.20e-16!94;UBERON:0000956!6.05e-16!21;UBERON:0001869!6.05e-16!21;UBERON:0000203!6.05e-16!21;UBERON:0002619!1.11e-12!17;UBERON:0002021!1.55e-11!10;UBERON:0000411!1.55e-11!10;UBERON:0001950!1.55e-11!10;UBERON:0003076!4.18e-08!12;UBERON:0003057!4.18e-08!12;UBERON:0002420!8.70e-08!8;UBERON:0007245!8.70e-08!8;UBERON:0010009!8.70e-08!8;UBERON:0010011!8.70e-08!8;UBERON:0000454!8.70e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.60e-31,54;UBERON:0002346,1.49e-29,64;UBERON:0003075,1.49e-29,64;UBERON:0007284,1.49e-29,64;UBERON:0001049,1.73e-29,52;UBERON:0005068,1.73e-29,52;UBERON:0006241,1.73e-29,52;UBERON:0007135,1.73e-29,52;UBERON:0002020,2.05e-29,34;UBERON:0001017,2.04e-25,73;UBERON:0003528,2.92e-25,29;UBERON:0002791,2.92e-25,29;UBERON:0001893,2.92e-25,29;UBERON:0000955,2.98e-25,47;UBERON:0006238,2.98e-25,47;UBERON:0002616,2.66e-24,46;UBERON:0001016,2.77e-24,75;UBERON:0003056,3.60e-24,49;UBERON:0010371,7.78e-24,73;UBERON:0003080,4.83e-22,40;UBERON:0004121,6.86e-22,95;UBERON:0000924,6.86e-22,95;UBERON:0006601,6.86e-22,95;UBERON:0002780,5.06e-21,39;UBERON:0001890,5.06e-21,39;UBERON:0006240,5.06e-21,39;UBERON:0000956,8.17e-18,21;UBERON:0001869,8.17e-18,21;UBERON:0000203,8.17e-18,21;UBERON:0010314,1.40e-15,92;UBERON:0002619,3.67e-14,17;UBERON:0002021,1.02e-12,10;UBERON:0000411,1.02e-12,10;UBERON:0001950,1.02e-12,10;UBERON:0002420,1.59e-08,8;UBERON:0007245,1.59e-08,8;UBERON:0010009,1.59e-08,8;UBERON:0010011,1.59e-08,8;UBERON:0000454,1.59e-08,8;UBERON:0003076,8.00e-08,12;UBERON:0003057,8.00e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3488311908182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,1.90149421051854,0,0,0,0,0,0,0,12.3390638647088,10.9354810048669,12.8298226424343,4.57041575046086,8.83474163806454,10.779190330916,6.61333750025831,4.5960939330501,20.9220173898839,33.4540825783192,32.4109785170674,8.17694983927202,10.5210790142771,11.4600941522487,20.9387249251036,34.3285192119325,44.1586936074981,15.0260578591571,17.3693450574906,8.38797506213853,0.075726193333184,0.151143120213571,0,0,0,0,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.2326267995473,40.2137677081834,0,0,0,0,56.0216991374037,66.7950880115195,16.712028831011,120.981726853824,115.071955798649,45.5055817585437,80.7961490077433,0,0,0,0.631325567659422,0.520481771850815,1.60931473103431,1.62055916824814,1.80845781402858,3.46986145671772,4.22775276940004,4.49768277886698,6.46758426847539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,125.33280934422,21.712873212029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4036896781444,28.7168632150898,0,0,0,0,0.215423397732799,0,0,0,0,0,0,24.0990987316355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76615448055303,0.540183282093931,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0,0,0,0,26.3303928854924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,118.033135106967,135.33561953311,106.558565499728,96.2377821124651,113.038615762156,130.683144248418,113.403780038943,106.275803960916,121.442165607767,115.460549520656,0.62272408550506,2.79317411380722,2.04880326904961,1.94485373654635,2.09613162627982,1.10306105070008,4.4449345560323,4.73880631649457,2.88827288632634,4.80124702351215,5.0695859978048,3.58390048633545,3.7456602987953,5.05798703998467,4.93945033018274,4.76293691283074,5.2147946675185,1.73618298417335,3.70877310722976,3.53277408322554,2.05721551431249,4.96932257246145,3.33810665926249,3.77900683244054,6.11710972699649,3.80765735512544,4.39027134894654,4.99832451731901,4.48153575691344,6.17256498823512,4.38949567059444,3.64466584789585,4.09231043169689,4.49316839439301,1.73615949883027,8.99318080576605,3.74290573512653,3.65280791882107,1.14772999241306,0.441182838239031,0.695603506861264 | |||
|short_description=p4@Gpm6a | |||
}} |
Revision as of 15:47, 14 September 2013
Short description: | p4@Gpm6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gpm6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 365bp_to_ENSMUST00000033915, NM_001253756, NM_153581, uc009lsl.2_5end |
EntrezGene: | Gpm6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.02e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.02e-19 | 23 |
neuron | 3.27e-11 | 33 |
neuronal stem cell | 3.27e-11 | 33 |
neuroblast | 3.27e-11 | 33 |
electrically signaling cell | 3.27e-11 | 33 |
electrically responsive cell | 2.08e-08 | 39 |
electrically active cell | 2.08e-08 | 39 |
neural cell | 5.17e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.