FFCP PHASE1:Mm9::chr8:74713512..74713563,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=209488|HGNC=|MCL_coexpression_id=177|UniProt=Q6VYH9|association_with_transcript=-3bp_to_ENSMUST00000072097,NM_197944,uc009mfl.1_5end|description=CAGE_peak_1_at_Hsh2d_5end|id=chr8:74713512..74713563,+|ontology_enrichment_celltype=CL:0000988!1.49e-07!32;CL:0002032!1.49e-07!32;CL:0000037!1.49e-07!32;CL:0000566!1.49e-07!32;CL:0000837!1.49e-07!32;CL:0000838!4.31e-07!12;CL:0002031!7.37e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,3.60e-11,32;CL:0002032,3.60e-11,32;CL:0000037,3.60e-11,32;CL:0000837,3.60e-11,32;CL:0002031,4.74e-10,25;CL:0000838,7.30e-09,12;CL:0000084,4.95e-08,11;CL:0000827,4.95e-08,11;CL:0000542,7.36e-08,13;CL:0000051,7.36e-08,13;CL:0000738,7.76e-07,17;CL:0002087,7.76e-07,17;CL:0000553,9.12e-07,6;CL:0000556,9.12e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.23e-17!130;UBERON:0000925!7.23e-17!130;UBERON:0006595!7.23e-17!130;UBERON:0001007!1.36e-16!128;UBERON:0001555!1.36e-16!128;UBERON:0007026!1.36e-16!128;UBERON:0004921!1.53e-15!126;UBERON:0004185!1.53e-15!126;UBERON:0002193!2.18e-12!48;UBERON:0005409!5.49e-11!59;UBERON:0002390!9.73e-11!45;UBERON:0003061!9.73e-11!45;UBERON:0004923!1.73e-10!24;UBERON:0004177!1.02e-09!29;UBERON:0000344!1.11e-07!15;UBERON:0002405!1.18e-07!70;UBERON:0001004!1.18e-07!42;UBERON:0000065!1.98e-07!41;UBERON:0003408!2.27e-07!24;UBERON:0000160!2.38e-07!43;UBERON:0000072!2.83e-07!27;UBERON:0006562!3.40e-07!24;UBERON:0001557!3.40e-07!24;UBERON:0001042!3.40e-07!24;UBERON:0008814!3.40e-07!24;UBERON:0009145!3.40e-07!24;UBERON:0002370!3.77e-07!23;UBERON:0000974!3.77e-07!23;UBERON:0004807!3.77e-07!23;UBERON:0005058!3.77e-07!23;UBERON:0003351!3.77e-07!23;UBERON:0009113!3.77e-07!23;UBERON:0003295!3.77e-07!23;UBERON:0009722!3.77e-07!23;UBERON:0005562!3.77e-07!23;UBERON:0007690!3.77e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.35e-17,48;UBERON:0002405,1.35e-17,48;UBERON:0001007,1.93e-16,116;UBERON:0001555,1.93e-16,116;UBERON:0007026,1.93e-16,116;UBERON:0005409,2.32e-16,47;UBERON:0004119,9.30e-16,118;UBERON:0000925,9.30e-16,118;UBERON:0006595,9.30e-16,118;UBERON:0002390,2.47e-15,45;UBERON:0003061,2.47e-15,45;UBERON:0004921,3.27e-15,114;UBERON:0004177,1.55e-12,29;UBERON:0005057,1.55e-12,29;UBERON:0000160,2.69e-12,31;UBERON:0004923,6.80e-11,24;UBERON:0003408,3.64e-10,24;UBERON:0002370,7.06e-10,23;UBERON:0000974,7.06e-10,23;UBERON:0004807,7.06e-10,23;UBERON:0005058,7.06e-10,23;UBERON:0003351,7.06e-10,23;UBERON:0009113,7.06e-10,23;UBERON:0003295,7.06e-10,23;UBERON:0009722,7.06e-10,23;UBERON:0005562,7.06e-10,23;UBERON:0007690,7.06e-10,23;UBERON:0000344,1.22e-09,15;UBERON:0006562,3.54e-09,24;UBERON:0001557,3.54e-09,24;UBERON:0001042,3.54e-09,24;UBERON:0008814,3.54e-09,24;UBERON:0009145,3.54e-09,24;UBERON:0000072,6.11e-09,27;UBERON:0000077,7.34e-09,35;UBERON:0001242,3.32e-08,13;UBERON:0001262,3.32e-08,13;UBERON:0004786,3.32e-08,13;UBERON:0001004,1.03e-07,42;UBERON:0000065,1.95e-07,41|phase1_expression=0.480446541314382,4.18770489167233,8.18998630901165,3.93203474698879,2.00358291978539,12.255186849568,11.2134067485852,34.9924206526672,2.25261955442667,2.34064526321993,5.82141091966717,4.22792442675283,35.780952555622,31.9084468829341,18.9872564234928,22.6772299476605,8.39474253753776,66.7202479732673,59.3705497512849,52.1999271711577,1.53077922271926,12.8085327049142,9.66439219814061,10.5594999043648,9.63518980482114,3.44539178469012,4.73838195774982,7.54149314400612,7.41091335879858,6.30075324399827,5.76499327703792,0,0,0,9.24325183204079,5.98444723290572,6.53341940039581,58.5944283031671,39.06676722619,50.7818031654584,61.1760747552255,51.2284113718834,44.181442125835,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0,0,0.194429899074283,0.419959264876088,0,19.6305649087552,7.25362142011344,18.1490651536931,0,0,0,0,0,0,0,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0.14084341977668,0,0,0,0.216491041011214,2.02687892380079,2.02209778005913,4.22480354960522,48.6803221256683,0.742210695324124,0,0,0.230615497256059,0,0.352766121407114,0,3.95511948374998,1.44599356919912,11.4999371753484,0.647067399789637,5.52103796150984,4.363877278217,1.86391761218122,0,0,4.85368404896324,3.59445373517761,3.59941638596045,3.68503658511888,0.149790639404823,0,0,0,0,0,0,0.101839363850316,5.84712761867437,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.823128545631774,0,2.80885274925294,2.83082697826187,2.27330799516474,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0.134206418760372,0,0,4.95628174475697,15.3381328664856,0,0.464473343720877,0.77320476793256,1.61346819698674,3.7804267453628,3.61428689613862,3.79623249235609,5.92916237006439,8.04272668160862,7.36138946552258,7.79856348476481,7.19055526923377,3.02593269824572,2.58883655230677,0,0,0,0.203651327845314,0,0,0.1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| ||
|EntrezGene=209488 | |||
|HGNC= | |||
|MCL_coexpression_id=177 | |||
|UniProt=Q6VYH9 | |||
|association_with_transcript=-3bp_to_ENSMUST00000072097,NM_197944,uc009mfl.1_5end | |||
|description=CAGE_peak_1_at_Hsh2d_5end | |||
|id=chr8:74713512..74713563,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.49e-07!32;CL:0002032!1.49e-07!32;CL:0000037!1.49e-07!32;CL:0000566!1.49e-07!32;CL:0000837!1.49e-07!32;CL:0000838!4.31e-07!12;CL:0002031!7.37e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.60e-11,32;CL:0002032,3.60e-11,32;CL:0000037,3.60e-11,32;CL:0000837,3.60e-11,32;CL:0002031,4.74e-10,25;CL:0000838,7.30e-09,12;CL:0000084,4.95e-08,11;CL:0000827,4.95e-08,11;CL:0000542,7.36e-08,13;CL:0000051,7.36e-08,13;CL:0000738,7.76e-07,17;CL:0002087,7.76e-07,17;CL:0000553,9.12e-07,6;CL:0000556,9.12e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.23e-17!130;UBERON:0000925!7.23e-17!130;UBERON:0006595!7.23e-17!130;UBERON:0001007!1.36e-16!128;UBERON:0001555!1.36e-16!128;UBERON:0007026!1.36e-16!128;UBERON:0004921!1.53e-15!126;UBERON:0004185!1.53e-15!126;UBERON:0002193!2.18e-12!48;UBERON:0005409!5.49e-11!59;UBERON:0002390!9.73e-11!45;UBERON:0003061!9.73e-11!45;UBERON:0004923!1.73e-10!24;UBERON:0004177!1.02e-09!29;UBERON:0000344!1.11e-07!15;UBERON:0002405!1.18e-07!70;UBERON:0001004!1.18e-07!42;UBERON:0000065!1.98e-07!41;UBERON:0003408!2.27e-07!24;UBERON:0000160!2.38e-07!43;UBERON:0000072!2.83e-07!27;UBERON:0006562!3.40e-07!24;UBERON:0001557!3.40e-07!24;UBERON:0001042!3.40e-07!24;UBERON:0008814!3.40e-07!24;UBERON:0009145!3.40e-07!24;UBERON:0002370!3.77e-07!23;UBERON:0000974!3.77e-07!23;UBERON:0004807!3.77e-07!23;UBERON:0005058!3.77e-07!23;UBERON:0003351!3.77e-07!23;UBERON:0009113!3.77e-07!23;UBERON:0003295!3.77e-07!23;UBERON:0009722!3.77e-07!23;UBERON:0005562!3.77e-07!23;UBERON:0007690!3.77e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.35e-17,48;UBERON:0002405,1.35e-17,48;UBERON:0001007,1.93e-16,116;UBERON:0001555,1.93e-16,116;UBERON:0007026,1.93e-16,116;UBERON:0005409,2.32e-16,47;UBERON:0004119,9.30e-16,118;UBERON:0000925,9.30e-16,118;UBERON:0006595,9.30e-16,118;UBERON:0002390,2.47e-15,45;UBERON:0003061,2.47e-15,45;UBERON:0004921,3.27e-15,114;UBERON:0004177,1.55e-12,29;UBERON:0005057,1.55e-12,29;UBERON:0000160,2.69e-12,31;UBERON:0004923,6.80e-11,24;UBERON:0003408,3.64e-10,24;UBERON:0002370,7.06e-10,23;UBERON:0000974,7.06e-10,23;UBERON:0004807,7.06e-10,23;UBERON:0005058,7.06e-10,23;UBERON:0003351,7.06e-10,23;UBERON:0009113,7.06e-10,23;UBERON:0003295,7.06e-10,23;UBERON:0009722,7.06e-10,23;UBERON:0005562,7.06e-10,23;UBERON:0007690,7.06e-10,23;UBERON:0000344,1.22e-09,15;UBERON:0006562,3.54e-09,24;UBERON:0001557,3.54e-09,24;UBERON:0001042,3.54e-09,24;UBERON:0008814,3.54e-09,24;UBERON:0009145,3.54e-09,24;UBERON:0000072,6.11e-09,27;UBERON:0000077,7.34e-09,35;UBERON:0001242,3.32e-08,13;UBERON:0001262,3.32e-08,13;UBERON:0004786,3.32e-08,13;UBERON:0001004,1.03e-07,42;UBERON:0000065,1.95e-07,41 | |||
|phase1_expression=0.480446541314382,4.18770489167233,8.18998630901165,3.93203474698879,2.00358291978539,12.255186849568,11.2134067485852,34.9924206526672,2.25261955442667,2.34064526321993,5.82141091966717,4.22792442675283,35.780952555622,31.9084468829341,18.9872564234928,22.6772299476605,8.39474253753776,66.7202479732673,59.3705497512849,52.1999271711577,1.53077922271926,12.8085327049142,9.66439219814061,10.5594999043648,9.63518980482114,3.44539178469012,4.73838195774982,7.54149314400612,7.41091335879858,6.30075324399827,5.76499327703792,0,0,0,9.24325183204079,5.98444723290572,6.53341940039581,58.5944283031671,39.06676722619,50.7818031654584,61.1760747552255,51.2284113718834,44.181442125835,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0,0,0.194429899074283,0.419959264876088,0,19.6305649087552,7.25362142011344,18.1490651536931,0,0,0,0,0,0,0,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0.14084341977668,0,0,0,0.216491041011214,2.02687892380079,2.02209778005913,4.22480354960522,48.6803221256683,0.742210695324124,0,0,0.230615497256059,0,0.352766121407114,0,3.95511948374998,1.44599356919912,11.4999371753484,0.647067399789637,5.52103796150984,4.363877278217,1.86391761218122,0,0,4.85368404896324,3.59445373517761,3.59941638596045,3.68503658511888,0.149790639404823,0,0,0,0,0,0,0.101839363850316,5.84712761867437,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.823128545631774,0,2.80885274925294,2.83082697826187,2.27330799516474,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0.134206418760372,0,0,4.95628174475697,15.3381328664856,0,0.464473343720877,0.77320476793256,1.61346819698674,3.7804267453628,3.61428689613862,3.79623249235609,5.92916237006439,8.04272668160862,7.36138946552258,7.79856348476481,7.19055526923377,3.02593269824572,2.58883655230677,0,0,0,0.203651327845314,0,0,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0,0.50925170356284,2.30156909960649,2.10775794807546,0.549122826376163,0,0.744281895337007,0.936113019343682,0.252578877947112,0.358794827043824,0.482443521363367,7.20537441649758,0,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,1.19021820443007,0.585400943573396,1.7339865851681,0.8858587585951,1.43509291791738,3.60499292374624,3.7990696010497,2.02508682014116,3.01582567878545,3.26343410291226,0,1.65562047782839,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0,0,2.96946221350564,1.32745138339963,0,0.302323556964751,0,0,0.307435147943927,2.06742634534577,0.727067458955011,0,0.632073515871632,0,1.03135543248187,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0.938686832254841,0.63549621259146,0.441056796109924,0.65954501176592,0.161464426695906,0,0.119372344003136,0,6.70405924248657,0.18542530201051,17.5997007221788,0.82554747185289,5.18544676635193,8.2882121082064,18.4537207423384,17.1583629904892,5.77926661979108,7.83728133012485,7.18639863783004,4.77335309007557,0,0.203319467126849,1.83609079397062,1.88179466413022,3.27543845619266,4.18079473792944,4.05001933054146,3.92633912976044,2.46268449254406,3.10669656543463,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0.288030006257865,13.5884781870117,3.64905387522296,4.41657115808757,7.7952493786677,5.54982756569192,5.56307793387542,7.21172697119813,7.97523446742717,7.87538309595551,6.09654453239999,7.36031151498936,10.5254511198933,7.40831180630537,9.70078288107022,0.906921534460845,0.443971906748129,0,0,0.772758376128762,3.56596703357246,7.14291334642334,0.857473516316263,2.00628841614145,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,1.28367683836726,0,0,0.377252682772152,0.37456602987953,0.192075457214608,0.459483751644906,0,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.715308569841963,0.436039249896986,0.282328141245992,0.338458431566706,0,0,0,0,0.118635018124174,0.591026894253381,1.63692417267876,0.464810523557898,0.192906610981141,0,0.467863216890817,0.859484216193193,0.57386499620653,1.10295709559758,2.55054619182464 | |||
|short_description=p1@Hsh2d | |||
}} |
Revision as of 16:04, 14 September 2013
Short description: | p1@Hsh2d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hsh2d_5end |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | -3bp_to_ENSMUST00000072097, NM_197944, uc009mfl.1_5end |
EntrezGene: | Hsh2d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.60e-11 | 32 |
hematopoietic oligopotent progenitor cell | 3.60e-11 | 32 |
hematopoietic stem cell | 3.60e-11 | 32 |
hematopoietic multipotent progenitor cell | 3.60e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 4.74e-10 | 25 |
lymphoid lineage restricted progenitor cell | 7.30e-09 | 12 |
T cell | 4.95e-08 | 11 |
pro-T cell | 4.95e-08 | 11 |
lymphocyte | 7.36e-08 | 13 |
common lymphoid progenitor | 7.36e-08 | 13 |
leukocyte | 7.76e-07 | 17 |
nongranular leukocyte | 7.76e-07 | 17 |
megakaryocyte progenitor cell | 9.12e-07 | 6 |
megakaryocyte | 9.12e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.