FFCP PHASE1:Mm9::chr8:97334346..97334361,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=20295|HGNC=|MCL_coexpression_id=160|UniProt=F6R5P4,Q9WUZ6,Q9R043|association_with_transcript=0bp_to_ENSMUST00000034232,NM_011332,uc009mwz.2_5end|description=CAGE_peak_1_at_Ccl17_5end|id=chr8:97334346..97334361,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!1.56e-10!26;UBERON:0000990!1.56e-10!26;UBERON:0003133!1.54e-09!24;UBERON:0007023!9.64e-09!51;UBERON:0000464!2.06e-08!57;UBERON:0001004!1.23e-07!42;UBERON:0000065!4.14e-07!41;UBERON:0004119!5.14e-07!130;UBERON:0000925!5.14e-07!130;UBERON:0006595!5.14e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.56e-11,42;UBERON:0000065,3.04e-10,41;UBERON:0005156,3.96e-09,26;UBERON:0000990,3.96e-09,26;UBERON:0003133,9.75e-09,24;UBERON:0000473,1.64e-08,14;UBERON:0003135,8.32e-08,15;UBERON:0003408,1.72e-07,24;UBERON:0000991,2.06e-07,18;UBERON:0005564,2.06e-07,18;UBERON:0006562,2.43e-07,24;UBERON:0001557,2.43e-07,24;UBERON:0001042,2.43e-07,24;UBERON:0008814,2.43e-07,24;UBERON:0009145,2.43e-07,24;UBERON:0003101,3.42e-07,16;UBERON:0000079,3.42e-07,16;UBERON:0007023,7.65e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0.261199789138935,0.159992422793407,0.91763712426868,0,0,0.215471232685889,1.14014051673824,0.756090389279792,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85592037554813,2.72201858703997,0,0,0,0,0,4.11615097657515,2.57880095944881,7.21940929188419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,1.72084775396277,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,8.02707439306232,0.742210695324124,0,0,0,0,9.99504010653491,0.125666591329675,0.247194967734374,0.578397427679647,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0.162241263067758,1.62942982160506,0.622034853050465,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.350296027101508,0,0.164167464079095,0.324275238183423,0.292399974850665,0.658650345873152,0.805238512562231,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0.898819408654221,1.29682829924817,2.19055400579804,0,0,0,0,0,0,0.126473074248515,0.295220295959204,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,0,0,0,22.7246423904924,0,0,0,0.234690248288502,0.335012514883631,0.476087281772027,0.585400943573396,2.83743259391144,2.87904096543407,8.77001227616179,13.2729284919748,34.3643113913132,27.3386720719057,0,0,2.45882136509518,1.37968373152366,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,2.14461159864296,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0.356497378384721,1.26414703174326,2.10837217149998,0,0.340439605753788,0,0,0,0,0,0,0,0.938686832254841,0.847328283455281,0.882113592219848,1.81374878235628,0,0.0603129249281559,0.358117032009409,0.164140899745061,0.874442509889552,0,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,3.81868247206045,0,0,0,0,0.218362563746178,0,1.23980183588004,2.09404753587224,1.03691978633434,4.34937519160848,0,4.63501292736334,8.76929999422617,49.9739554044203,91.9617943161445,155.777547702497,145.992404875318,1.3020438484395,0,0,0.288030006257865,9.48033361884535,0.608175645870493,0.513554785824136,0.909445760844565,1.25318686967237,5.56307793387542,7.09153152167816,4.57837534241189,4.03865799792591,3.88654713940499,4.83965688656834,7.50425681696094,5.19543944857779,9.58390597888865,1.58711268530648,0,0,0,2.31827512838629,4.129014459926,1.28206136987086,6.21668299329291,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.50695859978048,0,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.365855945745545,0,0,0,0.118635018124174,0,0,0.77468420592983,0.385813221962283,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.695603506861264|short_description=p1@Ccl17}} | ||
|EntrezGene=20295 | |||
|HGNC= | |||
|MCL_coexpression_id=160 | |||
|UniProt=F6R5P4,Q9WUZ6,Q9R043 | |||
|association_with_transcript=0bp_to_ENSMUST00000034232,NM_011332,uc009mwz.2_5end | |||
|description=CAGE_peak_1_at_Ccl17_5end | |||
|id=chr8:97334346..97334361,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.56e-10!26;UBERON:0000990!1.56e-10!26;UBERON:0003133!1.54e-09!24;UBERON:0007023!9.64e-09!51;UBERON:0000464!2.06e-08!57;UBERON:0001004!1.23e-07!42;UBERON:0000065!4.14e-07!41;UBERON:0004119!5.14e-07!130;UBERON:0000925!5.14e-07!130;UBERON:0006595!5.14e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.56e-11,42;UBERON:0000065,3.04e-10,41;UBERON:0005156,3.96e-09,26;UBERON:0000990,3.96e-09,26;UBERON:0003133,9.75e-09,24;UBERON:0000473,1.64e-08,14;UBERON:0003135,8.32e-08,15;UBERON:0003408,1.72e-07,24;UBERON:0000991,2.06e-07,18;UBERON:0005564,2.06e-07,18;UBERON:0006562,2.43e-07,24;UBERON:0001557,2.43e-07,24;UBERON:0001042,2.43e-07,24;UBERON:0008814,2.43e-07,24;UBERON:0009145,2.43e-07,24;UBERON:0003101,3.42e-07,16;UBERON:0000079,3.42e-07,16;UBERON:0007023,7.65e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0.261199789138935,0.159992422793407,0.91763712426868,0,0,0.215471232685889,1.14014051673824,0.756090389279792,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85592037554813,2.72201858703997,0,0,0,0,0,4.11615097657515,2.57880095944881,7.21940929188419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,1.72084775396277,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,8.02707439306232,0.742210695324124,0,0,0,0,9.99504010653491,0.125666591329675,0.247194967734374,0.578397427679647,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0.162241263067758,1.62942982160506,0.622034853050465,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.350296027101508,0,0.164167464079095,0.324275238183423,0.292399974850665,0.658650345873152,0.805238512562231,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0.898819408654221,1.29682829924817,2.19055400579804,0,0,0,0,0,0,0.126473074248515,0.295220295959204,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,0,0,0,22.7246423904924,0,0,0,0.234690248288502,0.335012514883631,0.476087281772027,0.585400943573396,2.83743259391144,2.87904096543407,8.77001227616179,13.2729284919748,34.3643113913132,27.3386720719057,0,0,2.45882136509518,1.37968373152366,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,2.14461159864296,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0.356497378384721,1.26414703174326,2.10837217149998,0,0.340439605753788,0,0,0,0,0,0,0,0.938686832254841,0.847328283455281,0.882113592219848,1.81374878235628,0,0.0603129249281559,0.358117032009409,0.164140899745061,0.874442509889552,0,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,3.81868247206045,0,0,0,0,0.218362563746178,0,1.23980183588004,2.09404753587224,1.03691978633434,4.34937519160848,0,4.63501292736334,8.76929999422617,49.9739554044203,91.9617943161445,155.777547702497,145.992404875318,1.3020438484395,0,0,0.288030006257865,9.48033361884535,0.608175645870493,0.513554785824136,0.909445760844565,1.25318686967237,5.56307793387542,7.09153152167816,4.57837534241189,4.03865799792591,3.88654713940499,4.83965688656834,7.50425681696094,5.19543944857779,9.58390597888865,1.58711268530648,0,0,0,2.31827512838629,4.129014459926,1.28206136987086,6.21668299329291,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.50695859978048,0,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.365855945745545,0,0,0,0.118635018124174,0,0,0.77468420592983,0.385813221962283,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p1@Ccl17 | |||
}} |
Revision as of 16:32, 14 September 2013
Short description: | p1@Ccl17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccl17_5end |
Coexpression cluster: | MCL_coexpression_mm9:160 |
Association with transcript: | 0bp_to_ENSMUST00000034232, NM_011332, uc009mwz.2_5end |
EntrezGene: | Ccl17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 3.56e-11 | 42 |
respiratory tract | 3.04e-10 | 41 |
reproductive structure | 3.96e-09 | 26 |
reproductive system | 3.96e-09 | 26 |
reproductive organ | 9.75e-09 | 24 |
testis | 1.64e-08 | 14 |
male reproductive organ | 8.32e-08 | 15 |
gland of gut | 1.72e-07 | 24 |
gonad | 2.06e-07 | 18 |
gonad primordium | 2.06e-07 | 18 |
pharynx | 2.43e-07 | 24 |
upper respiratory tract | 2.43e-07 | 24 |
chordate pharynx | 2.43e-07 | 24 |
pharyngeal arch system | 2.43e-07 | 24 |
pharyngeal region of foregut | 2.43e-07 | 24 |
male organism | 3.42e-07 | 16 |
male reproductive system | 3.42e-07 | 16 |
adult organism | 7.65e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.