FFCP PHASE1:Mm9::chr9:108419401..108419448,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69232|HGNC=|UniProt=G3X8R5,Q3UA37,Q8BUN3|association_with_transcript=0bp_to_ENSMUST00000006851,ENSMUST00000112155,NM_001114119,NM_175143,uc009rqb.2,uc009rqc.2,uc009rqd.2,uc009rqe.2_5end|description=CAGE_peak_1_at_Qrich1_5end|id=chr9:108419401..108419448,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!6.72e-09!94;UBERON:0002370!1.01e-08!23;UBERON:0000974!1.01e-08!23;UBERON:0004807!1.01e-08!23;UBERON:0005058!1.01e-08!23;UBERON:0003351!1.01e-08!23;UBERON:0009113!1.01e-08!23;UBERON:0003295!1.01e-08!23;UBERON:0009722!1.01e-08!23;UBERON:0005562!1.01e-08!23;UBERON:0007690!1.01e-08!23;UBERON:0004177!1.48e-08!29;UBERON:0003408!2.96e-08!24;UBERON:0000065!3.06e-08!41;UBERON:0006562!3.32e-08!24;UBERON:0001557!3.32e-08!24;UBERON:0001042!3.32e-08!24;UBERON:0008814!3.32e-08!24;UBERON:0009145!3.32e-08!24;UBERON:0001004!5.89e-08!42;UBERON:0000072!4.04e-07!27;UBERON:0007811!4.33e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.24e-09,43;UBERON:0002370,1.01e-08,23;UBERON:0000974,1.01e-08,23;UBERON:0004807,1.01e-08,23;UBERON:0005058,1.01e-08,23;UBERON:0003351,1.01e-08,23;UBERON:0009113,1.01e-08,23;UBERON:0003295,1.01e-08,23;UBERON:0009722,1.01e-08,23;UBERON:0005562,1.01e-08,23;UBERON:0007690,1.01e-08,23;UBERON:0004177,1.48e-08,29;UBERON:0005057,1.48e-08,29;UBERON:0003408,2.96e-08,24;UBERON:0000065,3.06e-08,41;UBERON:0006562,3.32e-08,24;UBERON:0001557,3.32e-08,24;UBERON:0001042,3.32e-08,24;UBERON:0008814,3.32e-08,24;UBERON:0009145,3.32e-08,24;UBERON:0007811,3.76e-08,36;UBERON:0001004,5.89e-08,42;UBERON:0000072,4.04e-07,27|phase1_expression=32.670364809378,25.8241801653127,30.4849490390989,25.1045295384669,32.0573267165662,28.875234768845,30.1360306368228,45.4514098514348,78.56010696063,61.5589704226843,53.9336599910341,51.0541817570153,53.5858284684674,47.4692785135156,52.9644521286904,44.7470340931515,46.8706458345858,54.7326856896542,48.812738363643,37.3462893582267,52.6417966035122,38.5248890659435,44.6651639427579,28.9586285256066,20.8762445771125,22.9692785646008,20.2458138194765,30.5969150413962,27.5533958211742,29.9915854414318,20.399206980288,28.5763803056834,49.8202477943502,0,32.0625297923915,28.0936550655852,33.2796050707662,41.016099812217,28.9094077473806,30.8879008944541,37.6468152339849,40.9827290975067,36.4132764773365,25.4311572310666,29.6020639160983,25.3294517983121,9.38869613217647,19.4042389178597,17.7945808014922,24.8870270815083,22.397827460058,17.2503077237966,63.7573903019398,68.1840413490664,61.5051652430709,38.0743965333202,32.951345592957,33.0030139057563,45.9258366151287,42.8482693210347,39.2975470173831,19.9918273920788,15.1180115338894,11.2487464660175,12.8552627133707,20.6039233334369,11.3848041996994,12.2949857702897,58.4809413419814,54.8124109626664,61.2045637532522,26.2798905651499,32.2468069789356,56.100786040449,64.1206201112001,63.4260962760914,44.0463523997555,32.5602712117229,30.1068805182237,45.6326555546471,51.3245680609518,51.5704236851192,31.8268618861574,29.826418331679,30.8652460509156,30.6413728892614,30.467539691008,36.3478919359336,35.4398584799301,34.4606314086942,53.3350659211087,26.673140186423,27.19885334831,19.4293148989614,16.8941868536394,18.8171292580881,29.3528838075361,28.2914335479576,18.9643783360094,22.9670723431721,36.4784457221603,51.3305909657271,48.4129955442627,63.9960032837998,34.422075520783,31.6699831843873,37.9143333761088,26.0339245759457,57.4842101696721,38.2980718787248,37.8198012350176,33.1867371360234,37.3597105554815,28.0344111427878,44.213353883025,35.8149785289575,33.8657105796092,31.9564578793005,31.8459798701955,44.1623500356427,41.9598885074748,31.0320162006542,18.6391761218122,47.7232699128822,50.2672096352292,30.1439325146138,54.156436276676,31.1949420116572,50.0656694667875,36.9982879329912,46.2075608846813,50.7643582535972,34.591039718263,34.2658712822643,34.492815396887,36.17980166411,51.836236199811,37.6953120948582,30.8321765289083,37.6690922036788,41.1180599762144,35.8647282916218,54.5588253310208,39.1832526372859,52.9323963397331,44.5835746591277,52.5666674780079,35.7010651619842,70.0595977031737,54.2734450081641,49.0903636417417,43.1815592882322,41.7070873838397,48.058798980059,31.4846668704153,43.190435899613,42.1327912387941,41.1756651383544,40.6353804135697,50.331562726127,42.4492168565784,35.2921640463589,51.1368628864054,34.2369763240483,36.8698399800834,35.1126256573116,33.802448576352,42.8528806487512,37.8487654801005,34.47516745661,33.724624771076,29.5323974599171,28.9806152184187,28.4517607771988,38.9036404843635,48.1593585935051,27.4247589876552,25.6517049663638,46.0702621156105,45.518387684646,46.7788884599199,37.9165026291884,29.7986578752126,31.1970026824597,24.2009821387701,28.6576181219779,30.9142306824331,36.6079908555717,35.8733920299181,29.6610404855893,27.4495323340862,30.8668973544269,57.0900381868776,42.7289437160386,52.9726357663478,38.4901009627644,42.66954717687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| ||
|EntrezGene=69232 | |||
|HGNC= | |||
|UniProt=G3X8R5,Q3UA37,Q8BUN3 | |||
|association_with_transcript=0bp_to_ENSMUST00000006851,ENSMUST00000112155,NM_001114119,NM_175143,uc009rqb.2,uc009rqc.2,uc009rqd.2,uc009rqe.2_5end | |||
|description=CAGE_peak_1_at_Qrich1_5end | |||
|id=chr9:108419401..108419448,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!6.72e-09!94;UBERON:0002370!1.01e-08!23;UBERON:0000974!1.01e-08!23;UBERON:0004807!1.01e-08!23;UBERON:0005058!1.01e-08!23;UBERON:0003351!1.01e-08!23;UBERON:0009113!1.01e-08!23;UBERON:0003295!1.01e-08!23;UBERON:0009722!1.01e-08!23;UBERON:0005562!1.01e-08!23;UBERON:0007690!1.01e-08!23;UBERON:0004177!1.48e-08!29;UBERON:0003408!2.96e-08!24;UBERON:0000065!3.06e-08!41;UBERON:0006562!3.32e-08!24;UBERON:0001557!3.32e-08!24;UBERON:0001042!3.32e-08!24;UBERON:0008814!3.32e-08!24;UBERON:0009145!3.32e-08!24;UBERON:0001004!5.89e-08!42;UBERON:0000072!4.04e-07!27;UBERON:0007811!4.33e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.24e-09,43;UBERON:0002370,1.01e-08,23;UBERON:0000974,1.01e-08,23;UBERON:0004807,1.01e-08,23;UBERON:0005058,1.01e-08,23;UBERON:0003351,1.01e-08,23;UBERON:0009113,1.01e-08,23;UBERON:0003295,1.01e-08,23;UBERON:0009722,1.01e-08,23;UBERON:0005562,1.01e-08,23;UBERON:0007690,1.01e-08,23;UBERON:0004177,1.48e-08,29;UBERON:0005057,1.48e-08,29;UBERON:0003408,2.96e-08,24;UBERON:0000065,3.06e-08,41;UBERON:0006562,3.32e-08,24;UBERON:0001557,3.32e-08,24;UBERON:0001042,3.32e-08,24;UBERON:0008814,3.32e-08,24;UBERON:0009145,3.32e-08,24;UBERON:0007811,3.76e-08,36;UBERON:0001004,5.89e-08,42;UBERON:0000072,4.04e-07,27 | |||
|phase1_expression=32.670364809378,25.8241801653127,30.4849490390989,25.1045295384669,32.0573267165662,28.875234768845,30.1360306368228,45.4514098514348,78.56010696063,61.5589704226843,53.9336599910341,51.0541817570153,53.5858284684674,47.4692785135156,52.9644521286904,44.7470340931515,46.8706458345858,54.7326856896542,48.812738363643,37.3462893582267,52.6417966035122,38.5248890659435,44.6651639427579,28.9586285256066,20.8762445771125,22.9692785646008,20.2458138194765,30.5969150413962,27.5533958211742,29.9915854414318,20.399206980288,28.5763803056834,49.8202477943502,0,32.0625297923915,28.0936550655852,33.2796050707662,41.016099812217,28.9094077473806,30.8879008944541,37.6468152339849,40.9827290975067,36.4132764773365,25.4311572310666,29.6020639160983,25.3294517983121,9.38869613217647,19.4042389178597,17.7945808014922,24.8870270815083,22.397827460058,17.2503077237966,63.7573903019398,68.1840413490664,61.5051652430709,38.0743965333202,32.951345592957,33.0030139057563,45.9258366151287,42.8482693210347,39.2975470173831,19.9918273920788,15.1180115338894,11.2487464660175,12.8552627133707,20.6039233334369,11.3848041996994,12.2949857702897,58.4809413419814,54.8124109626664,61.2045637532522,26.2798905651499,32.2468069789356,56.100786040449,64.1206201112001,63.4260962760914,44.0463523997555,32.5602712117229,30.1068805182237,45.6326555546471,51.3245680609518,51.5704236851192,31.8268618861574,29.826418331679,30.8652460509156,30.6413728892614,30.467539691008,36.3478919359336,35.4398584799301,34.4606314086942,53.3350659211087,26.673140186423,27.19885334831,19.4293148989614,16.8941868536394,18.8171292580881,29.3528838075361,28.2914335479576,18.9643783360094,22.9670723431721,36.4784457221603,51.3305909657271,48.4129955442627,63.9960032837998,34.422075520783,31.6699831843873,37.9143333761088,26.0339245759457,57.4842101696721,38.2980718787248,37.8198012350176,33.1867371360234,37.3597105554815,28.0344111427878,44.213353883025,35.8149785289575,33.8657105796092,31.9564578793005,31.8459798701955,44.1623500356427,41.9598885074748,31.0320162006542,18.6391761218122,47.7232699128822,50.2672096352292,30.1439325146138,54.156436276676,31.1949420116572,50.0656694667875,36.9982879329912,46.2075608846813,50.7643582535972,34.591039718263,34.2658712822643,34.492815396887,36.17980166411,51.836236199811,37.6953120948582,30.8321765289083,37.6690922036788,41.1180599762144,35.8647282916218,54.5588253310208,39.1832526372859,52.9323963397331,44.5835746591277,52.5666674780079,35.7010651619842,70.0595977031737,54.2734450081641,49.0903636417417,43.1815592882322,41.7070873838397,48.058798980059,31.4846668704153,43.190435899613,42.1327912387941,41.1756651383544,40.6353804135697,50.331562726127,42.4492168565784,35.2921640463589,51.1368628864054,34.2369763240483,36.8698399800834,35.1126256573116,33.802448576352,42.8528806487512,37.8487654801005,34.47516745661,33.724624771076,29.5323974599171,28.9806152184187,28.4517607771988,38.9036404843635,48.1593585935051,27.4247589876552,25.6517049663638,46.0702621156105,45.518387684646,46.7788884599199,37.9165026291884,29.7986578752126,31.1970026824597,24.2009821387701,28.6576181219779,30.9142306824331,36.6079908555717,35.8733920299181,29.6610404855893,27.4495323340862,30.8668973544269,57.0900381868776,42.7289437160386,52.9726357663478,38.4901009627644,42.6695471768777,45.7285545684877,32.8829993046138,30.2600803358184,24.6488002710958,24.5560356204383,23.1233049127976,46.5497844947902,41.2773889737726,49.0199404998981,44.2235064626936,42.6883572761778,31.0643539173332,32.2219673944908,30.9678283140318,22.7885972946108,23.0029130443767,31.6319805518228,25.2750515222794,26.5207821844467,27.9859965094183,25.5695066322585,35.6573657021547,44.1514989425229,63.067445883064,39.3808598998436,41.7748641953534,48.5768146581266,45.9424226910007,46.0515408944405,36.5713534326363,46.7290495158915,44.4878804554389,34.2474327755892,35.0550513187768,37.4641061726115,33.1740824666399,36.9855864996723,31.4729134732183,34.7680300343963,30.1835109177049,29.0684982748664,30.4918998400616,38.3755809350647,32.8128548192907,30.0637833108412,35.9757074213774,36.0842884908354,39.4353653125838,36.5168724717594,37.2425845540903,25.4262596382841,30.8324466798288,53.33933852602,34.7753208760258,40.0647608251324,54.567131383448,40.4176801282712,27.8764790513922,40.3015856017269,30.8370028104046,25.4616857670462,33.6644157884081,36.5847826053274,32.8203932323641,27.6285634402904,39.2147116223193,24.6508671189936,25.3004660579997,26.8152412445286,40.5123130847008,41.23399053317,41.7828548618297,50.1548661973926,42.0296353732188,34.0684441619955,35.2134904088539,48.7143918583359,32.384695712792,33.2576351256198,29.7713337374199,42.5406532589018,35.3607094464033,43.0634283987033,34.8567244489158,40.8710840365203,32.9373345391731,35.7870832880284,39.8129152258997,37.5624099693065,41.113185076076,44.4549558531071,41.8284336826337,35.6893950202175,62.212105377751,59.0595128805837,61.2225883953597,31.5041303944987,59.4711667932534,47.1701163734289,31.7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| |||
|short_description=p1@Qrich1 | |||
}} |
Revision as of 16:50, 14 September 2013
Short description: | p1@Qrich1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Qrich1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000006851, ENSMUST00000112155, NM_001114119, NM_175143, uc009rqb.2, uc009rqc.2, uc009rqd.2, uc009rqe.2_5end |
EntrezGene: | Qrich1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.24e-09 | 43 |
thymus | 1.01e-08 | 23 |
neck | 1.01e-08 | 23 |
respiratory system epithelium | 1.01e-08 | 23 |
hemolymphoid system gland | 1.01e-08 | 23 |
pharyngeal epithelium | 1.01e-08 | 23 |
thymic region | 1.01e-08 | 23 |
pharyngeal gland | 1.01e-08 | 23 |
entire pharyngeal arch endoderm | 1.01e-08 | 23 |
thymus primordium | 1.01e-08 | 23 |
early pharyngeal endoderm | 1.01e-08 | 23 |
hemopoietic organ | 1.48e-08 | 29 |
immune organ | 1.48e-08 | 29 |
gland of gut | 2.96e-08 | 24 |
respiratory tract | 3.06e-08 | 41 |
pharynx | 3.32e-08 | 24 |
upper respiratory tract | 3.32e-08 | 24 |
chordate pharynx | 3.32e-08 | 24 |
pharyngeal arch system | 3.32e-08 | 24 |
pharyngeal region of foregut | 3.32e-08 | 24 |
craniocervical region | 3.76e-08 | 36 |
respiratory system | 5.89e-08 | 42 |
segment of respiratory tract | 4.04e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.