FFCP PHASE1:Mm9::chr9:67832482..67832485,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=438|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:67832482..67832485,+|id=chr9:67832482..67832485,+|ontology_enrichment_celltype=CL:0000117!1.47e-33!23;CL:0000337!1.47e-33!23;CL:0000540!5.91e-23!33;CL:0000047!5.91e-23!33;CL:0000031!5.91e-23!33;CL:0000404!5.91e-23!33;CL:0000393!3.42e-19!39;CL:0000211!3.42e-19!39;CL:0002610!2.22e-18!3;CL:0002319!2.89e-17!43;CL:0000221!7.73e-17!44;CL:0000133!7.73e-17!44;CL:0000055!1.25e-14!50;CL:0002321!5.48e-10!70;CL:0000220!5.48e-10!70;CL:0002612!1.55e-08!3;CL:0002614!2.00e-08!3;CL:0002613!2.37e-08!3;CL:0002608!6.43e-08!3;CL:0000723!2.71e-07!91;CL:0000048!2.71e-07!91;CL:0000034!9.81e-07!97|ontology_enrichment_celltype_v019_2=CL:0002610,1.58e-86,3;CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0000540,6.05e-09,33;CL:0000047,6.05e-09,33;CL:0000031,6.05e-09,33;CL:0000404,6.05e-09,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004684!2.22e-18!3;UBERON:0002275!2.22e-18!3;UBERON:0002020!5.06e-15!34;UBERON:0002420!1.96e-11!8;UBERON:0007245!1.96e-11!8;UBERON:0010009!1.96e-11!8;UBERON:0010011!1.96e-11!8;UBERON:0000454!1.96e-11!8;UBERON:0001017!2.45e-11!73;UBERON:0005743!2.45e-11!73;UBERON:0000073!5.48e-11!75;UBERON:0001016!5.48e-11!75;UBERON:0001948!1.02e-10!5;UBERON:0002315!1.02e-10!5;UBERON:0002616!3.30e-10!49;UBERON:0000955!5.61e-10!50;UBERON:0006238!5.61e-10!50;UBERON:0001049!2.22e-09!52;UBERON:0005068!2.22e-09!52;UBERON:0006241!2.22e-09!52;UBERON:0007135!2.22e-09!52;UBERON:0002240!5.12e-09!6;UBERON:0005174!5.12e-09!6;UBERON:0001137!5.12e-09!6;UBERON:0002791!1.13e-08!29;UBERON:0003528!1.13e-08!29;UBERON:0001893!1.13e-08!29;UBERON:0002257!1.55e-08!3;UBERON:0002038!2.00e-08!3;UBERON:0002308!2.00e-08!3;UBERON:0009663!2.00e-08!3;UBERON:0009661!2.00e-08!3;UBERON:0006331!2.00e-08!3;UBERON:0000125!2.00e-08!3;UBERON:0000033!1.21e-07!63;UBERON:0004121!1.34e-07!102;UBERON:0000924!1.34e-07!102;UBERON:0006601!1.34e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.58e-86,3;UBERON:0002275,1.58e-86,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,3.30347642998166,1.65993539510744,2.15049146558741,0,0.182975287204819,0.52091337055676,0.279182999001381,0,0.45839474333043,0.294628585473668,0.711858403995515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:67832482..67832485,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=438 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:67832482..67832485,+ | |||
|id=chr9:67832482..67832485,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.47e-33!23;CL:0000337!1.47e-33!23;CL:0000540!5.91e-23!33;CL:0000047!5.91e-23!33;CL:0000031!5.91e-23!33;CL:0000404!5.91e-23!33;CL:0000393!3.42e-19!39;CL:0000211!3.42e-19!39;CL:0002610!2.22e-18!3;CL:0002319!2.89e-17!43;CL:0000221!7.73e-17!44;CL:0000133!7.73e-17!44;CL:0000055!1.25e-14!50;CL:0002321!5.48e-10!70;CL:0000220!5.48e-10!70;CL:0002612!1.55e-08!3;CL:0002614!2.00e-08!3;CL:0002613!2.37e-08!3;CL:0002608!6.43e-08!3;CL:0000723!2.71e-07!91;CL:0000048!2.71e-07!91;CL:0000034!9.81e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.58e-86,3;CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0000540,6.05e-09,33;CL:0000047,6.05e-09,33;CL:0000031,6.05e-09,33;CL:0000404,6.05e-09,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004684!2.22e-18!3;UBERON:0002275!2.22e-18!3;UBERON:0002020!5.06e-15!34;UBERON:0002420!1.96e-11!8;UBERON:0007245!1.96e-11!8;UBERON:0010009!1.96e-11!8;UBERON:0010011!1.96e-11!8;UBERON:0000454!1.96e-11!8;UBERON:0001017!2.45e-11!73;UBERON:0005743!2.45e-11!73;UBERON:0000073!5.48e-11!75;UBERON:0001016!5.48e-11!75;UBERON:0001948!1.02e-10!5;UBERON:0002315!1.02e-10!5;UBERON:0002616!3.30e-10!49;UBERON:0000955!5.61e-10!50;UBERON:0006238!5.61e-10!50;UBERON:0001049!2.22e-09!52;UBERON:0005068!2.22e-09!52;UBERON:0006241!2.22e-09!52;UBERON:0007135!2.22e-09!52;UBERON:0002240!5.12e-09!6;UBERON:0005174!5.12e-09!6;UBERON:0001137!5.12e-09!6;UBERON:0002791!1.13e-08!29;UBERON:0003528!1.13e-08!29;UBERON:0001893!1.13e-08!29;UBERON:0002257!1.55e-08!3;UBERON:0002038!2.00e-08!3;UBERON:0002308!2.00e-08!3;UBERON:0009663!2.00e-08!3;UBERON:0009661!2.00e-08!3;UBERON:0006331!2.00e-08!3;UBERON:0000125!2.00e-08!3;UBERON:0000033!1.21e-07!63;UBERON:0004121!1.34e-07!102;UBERON:0000924!1.34e-07!102;UBERON:0006601!1.34e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.58e-86,3;UBERON:0002275,1.58e-86,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,3.30347642998166,1.65993539510744,2.15049146558741,0,0.182975287204819,0.52091337055676,0.279182999001381,0,0.45839474333043,0.294628585473668,0.711858403995515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:67832482..67832485,+ | |||
}} |
Revision as of 18:36, 14 September 2013
Short description: | p@chr9:67832482..67832485, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:67832482..67832485, + |
Coexpression cluster: | MCL_coexpression_mm9:438 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.58e-86 | 3 |
CNS neuron (sensu Vertebrata) | 2.24e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-12 | 23 |
neuron | 6.05e-09 | 33 |
neuronal stem cell | 6.05e-09 | 33 |
neuroblast | 6.05e-09 | 33 |
electrically signaling cell | 6.05e-09 | 33 |
electrically responsive cell | 1.01e-07 | 39 |
electrically active cell | 1.01e-07 | 39 |
neural cell | 4.30e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.58e-86 | 3 |
reticular formation | 1.58e-86 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.