FFCP PHASE1:Mm9::chrX:165758314..165758352,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=208|UniProt=|association_with_transcript=-1bp_to_uc009uxy.1_5end|description=CAGE_peak_1_at_uc009uxy.1_5end|id=chrX:165758314..165758352,+|ontology_enrichment_celltype=CL:0000117!1.01e-10!23;CL:0000337!1.01e-10!23;CL:0000540!1.55e-10!33;CL:0000047!1.55e-10!33;CL:0000031!1.55e-10!33;CL:0000404!1.55e-10!33;CL:0000393!2.93e-07!39;CL:0000211!2.93e-07!39;CL:0000221!3.08e-07!44;CL:0000133!3.08e-07!44;CL:0002319!6.21e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-16,23;CL:0000337,1.03e-16,23;CL:0000540,1.95e-11,33;CL:0000047,1.95e-11,33;CL:0000031,1.95e-11,33;CL:0000404,1.95e-11,33;CL:0000393,1.54e-08,39;CL:0000211,1.54e-08,39;CL:0000221,1.59e-07,44;CL:0000133,1.59e-07,44;CL:0002319,4.25e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.37e-19!73;UBERON:0005743!1.37e-19!73;UBERON:0000073!7.67e-19!75;UBERON:0001016!7.67e-19!75;UBERON:0002346!3.81e-18!71;UBERON:0003075!3.81e-18!71;UBERON:0007284!3.81e-18!71;UBERON:0000033!4.31e-18!63;UBERON:0004121!4.50e-17!102;UBERON:0000924!4.50e-17!102;UBERON:0006601!4.50e-17!102;UBERON:0001049!7.32e-17!52;UBERON:0005068!7.32e-17!52;UBERON:0006241!7.32e-17!52;UBERON:0007135!7.32e-17!52;UBERON:0000955!5.13e-16!50;UBERON:0006238!5.13e-16!50;UBERON:0002616!2.44e-15!49;UBERON:0003056!8.71e-14!49;UBERON:0002020!4.21e-13!34;UBERON:0003080!1.21e-11!40;UBERON:0002780!4.53e-11!39;UBERON:0001890!4.53e-11!39;UBERON:0006240!4.53e-11!39;UBERON:0002791!1.63e-10!29;UBERON:0003528!1.63e-10!29;UBERON:0001893!1.63e-10!29;UBERON:0007811!1.02e-09!86;UBERON:0000153!3.36e-09!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.31e-26,54;UBERON:0001017,9.38e-25,73;UBERON:0001049,1.07e-24,52;UBERON:0005068,1.07e-24,52;UBERON:0006241,1.07e-24,52;UBERON:0007135,1.07e-24,52;UBERON:0002346,1.30e-24,64;UBERON:0003075,1.30e-24,64;UBERON:0007284,1.30e-24,64;UBERON:0001016,1.27e-23,75;UBERON:0004121,7.68e-22,95;UBERON:0000924,7.68e-22,95;UBERON:0006601,7.68e-22,95;UBERON:0010371,8.53e-22,73;UBERON:0002020,5.82e-21,34;UBERON:0000955,1.80e-20,47;UBERON:0006238,1.80e-20,47;UBERON:0002616,1.97e-19,46;UBERON:0003056,5.99e-19,49;UBERON:0003080,3.78e-17,40;UBERON:0003528,1.01e-16,29;UBERON:0002791,1.01e-16,29;UBERON:0001893,1.01e-16,29;UBERON:0002780,3.12e-16,39;UBERON:0001890,3.12e-16,39;UBERON:0006240,3.12e-16,39;UBERON:0010314,3.22e-16,92;UBERON:0000956,1.41e-09,21;UBERON:0001869,1.41e-09,21;UBERON:0000203,1.41e-09,21;UBERON:0002021,1.67e-09,10;UBERON:0000411,1.67e-09,10;UBERON:0001950,1.67e-09,10;UBERON:0002420,4.40e-09,8;UBERON:0007245,4.40e-09,8;UBERON:0010009,4.40e-09,8;UBERON:0010011,4.40e-09,8;UBERON:0000454,4.40e-09,8;UBERON:0002619,5.19e-09,17;UBERON:0003076,3.10e-08,12;UBERON:0003057,3.10e-08,12|phase1_expression=1.76163731815273,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0.157731082679119,0.274228867211478,0,5.6128571499706,0.297872853602656,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0.408338712524738,0.418531630736908,0,1.0470474879476,1.17646297606203,0,0.971020706062307,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0,0.388859798148567,0.419959264876088,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0,5.86717736492834,6.34789175126439,3.80298842103708,0,0,0,0,0,0,0.384218305321555,1.03689612308478,1.21505344498522,0.420649922702764,4.57041575046086,2.87129103237098,2.32732518508413,1.34183659425531,0,6.60695285996332,4.46905683298157,4.76180253094355,5.93488294785872,4.29991924931325,4.68822033501084,7.81712397203867,5.6276261003168,7.02871939773326,2.35702868378934,3.84403538157578,4.84638559145781,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0.35333957451034,1.54927761754349,1.28326477414318,0,0,0.216491041011214,0,0,0.79928715803342,0.517875767294343,1.03909497345377,0.173485326766136,0.608930956624282,0.461230994512117,0.150722640552623,1.29347577849275,0.376999773989026,0.247194967734374,0.289198713839823,0,0.485300549842228,0,0.484875253135222,0,3.80615036115011,5.65506108396329,0,0.718890747035522,0,0.381210681219194,5.39246301857362,4.11750542536764,2.63874139437015,2.25971616249959,2.55715457330331,4.57133698031032,4.38051410282946,0.407357455401265,0.248813941220186,1.0108910337347,0.841767423545896,1.04096354370163,0.229902104433473,0.720248519221397,3.0140963567143,2.51735046859913,2.17793324484245,2.24884138943349,2.58703370739016,0,0.756424320671277,1.23165786914764,0,0.834141747676794,0,1.4404749548556,0.59710280045548,0.702213187313235,0.257347907114715,0,0.207125772535502,0,0.900310307305074,0.473489471170421,0.787056926989615,0.462801338662135,0.697601834251224,0.268273401399619,1.28441876603886,0.329119699826961,0.820837320395476,0.405344047729279,0.146199987425332,0.878200461164203,0.536825675041487,3.36463917702604,2.16099685996497,0.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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=208 | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_uc009uxy.1_5end | |||
|description=CAGE_peak_1_at_uc009uxy.1_5end | |||
|id=chrX:165758314..165758352,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.01e-10!23;CL:0000337!1.01e-10!23;CL:0000540!1.55e-10!33;CL:0000047!1.55e-10!33;CL:0000031!1.55e-10!33;CL:0000404!1.55e-10!33;CL:0000393!2.93e-07!39;CL:0000211!2.93e-07!39;CL:0000221!3.08e-07!44;CL:0000133!3.08e-07!44;CL:0002319!6.21e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-16,23;CL:0000337,1.03e-16,23;CL:0000540,1.95e-11,33;CL:0000047,1.95e-11,33;CL:0000031,1.95e-11,33;CL:0000404,1.95e-11,33;CL:0000393,1.54e-08,39;CL:0000211,1.54e-08,39;CL:0000221,1.59e-07,44;CL:0000133,1.59e-07,44;CL:0002319,4.25e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.37e-19!73;UBERON:0005743!1.37e-19!73;UBERON:0000073!7.67e-19!75;UBERON:0001016!7.67e-19!75;UBERON:0002346!3.81e-18!71;UBERON:0003075!3.81e-18!71;UBERON:0007284!3.81e-18!71;UBERON:0000033!4.31e-18!63;UBERON:0004121!4.50e-17!102;UBERON:0000924!4.50e-17!102;UBERON:0006601!4.50e-17!102;UBERON:0001049!7.32e-17!52;UBERON:0005068!7.32e-17!52;UBERON:0006241!7.32e-17!52;UBERON:0007135!7.32e-17!52;UBERON:0000955!5.13e-16!50;UBERON:0006238!5.13e-16!50;UBERON:0002616!2.44e-15!49;UBERON:0003056!8.71e-14!49;UBERON:0002020!4.21e-13!34;UBERON:0003080!1.21e-11!40;UBERON:0002780!4.53e-11!39;UBERON:0001890!4.53e-11!39;UBERON:0006240!4.53e-11!39;UBERON:0002791!1.63e-10!29;UBERON:0003528!1.63e-10!29;UBERON:0001893!1.63e-10!29;UBERON:0007811!1.02e-09!86;UBERON:0000153!3.36e-09!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.31e-26,54;UBERON:0001017,9.38e-25,73;UBERON:0001049,1.07e-24,52;UBERON:0005068,1.07e-24,52;UBERON:0006241,1.07e-24,52;UBERON:0007135,1.07e-24,52;UBERON:0002346,1.30e-24,64;UBERON:0003075,1.30e-24,64;UBERON:0007284,1.30e-24,64;UBERON:0001016,1.27e-23,75;UBERON:0004121,7.68e-22,95;UBERON:0000924,7.68e-22,95;UBERON:0006601,7.68e-22,95;UBERON:0010371,8.53e-22,73;UBERON:0002020,5.82e-21,34;UBERON:0000955,1.80e-20,47;UBERON:0006238,1.80e-20,47;UBERON:0002616,1.97e-19,46;UBERON:0003056,5.99e-19,49;UBERON:0003080,3.78e-17,40;UBERON:0003528,1.01e-16,29;UBERON:0002791,1.01e-16,29;UBERON:0001893,1.01e-16,29;UBERON:0002780,3.12e-16,39;UBERON:0001890,3.12e-16,39;UBERON:0006240,3.12e-16,39;UBERON:0010314,3.22e-16,92;UBERON:0000956,1.41e-09,21;UBERON:0001869,1.41e-09,21;UBERON:0000203,1.41e-09,21;UBERON:0002021,1.67e-09,10;UBERON:0000411,1.67e-09,10;UBERON:0001950,1.67e-09,10;UBERON:0002420,4.40e-09,8;UBERON:0007245,4.40e-09,8;UBERON:0010009,4.40e-09,8;UBERON:0010011,4.40e-09,8;UBERON:0000454,4.40e-09,8;UBERON:0002619,5.19e-09,17;UBERON:0003076,3.10e-08,12;UBERON:0003057,3.10e-08,12 | |||
|phase1_expression=1.76163731815273,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0.157731082679119,0.274228867211478,0,5.6128571499706,0.297872853602656,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0.408338712524738,0.418531630736908,0,1.0470474879476,1.17646297606203,0,0.971020706062307,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0,0.388859798148567,0.419959264876088,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0,5.86717736492834,6.34789175126439,3.80298842103708,0,0,0,0,0,0,0.384218305321555,1.03689612308478,1.21505344498522,0.420649922702764,4.57041575046086,2.87129103237098,2.32732518508413,1.34183659425531,0,6.60695285996332,4.46905683298157,4.76180253094355,5.93488294785872,4.29991924931325,4.68822033501084,7.81712397203867,5.6276261003168,7.02871939773326,2.35702868378934,3.84403538157578,4.84638559145781,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0.35333957451034,1.54927761754349,1.28326477414318,0,0,0.216491041011214,0,0,0.79928715803342,0.517875767294343,1.03909497345377,0.173485326766136,0.608930956624282,0.461230994512117,0.150722640552623,1.29347577849275,0.376999773989026,0.247194967734374,0.289198713839823,0,0.485300549842228,0,0.484875253135222,0,3.80615036115011,5.65506108396329,0,0.718890747035522,0,0.381210681219194,5.39246301857362,4.11750542536764,2.63874139437015,2.25971616249959,2.55715457330331,4.57133698031032,4.38051410282946,0.407357455401265,0.248813941220186,1.0108910337347,0.841767423545896,1.04096354370163,0.229902104433473,0.720248519221397,3.0140963567143,2.51735046859913,2.17793324484245,2.24884138943349,2.58703370739016,0,0.756424320671277,1.23165786914764,0,0.834141747676794,0,1.4404749548556,0.59710280045548,0.702213187313235,0.257347907114715,0,0.207125772535502,0,0.900310307305074,0.473489471170421,0.787056926989615,0.462801338662135,0.697601834251224,0.268273401399619,1.28441876603886,0.329119699826961,0.820837320395476,0.405344047729279,0.146199987425332,0.878200461164203,0.536825675041487,3.36463917702604,2.16099685996497,0.330418782983798,0.264450566663544,0.426576501070468,0,0.257734922644187,0.403367049246685,0,0,0,0,0.251335208800269,0.596869416123452,0.38992817423824,0,0.432276099749388,0,0,0.571242563048644,0,0.610953983535943,0.387904974335251,0.841629838683823,1.01178459398812,0.442830443938806,0.470996183524124,0.246794327843601,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.324270453550071,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,0.488894929326078,0,0,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0.797273843287435,0.491589944147214,0.172684981865896,0.578596234326046,0,0,0,0,5.9403718295483,4.92289083687253,0,1.00988370881749,0.315508219416257,0.780877488593277,0.646270193198397,0.955875191810208,0.445597348164788,1.13230612315533,0.404810701674894,0.584511715822624,0.790575555893047,9.63963949265421,0.567760340833074,3.20518086601059,1.79175655288934,1.31976098378028,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,3.74483566329167,1.26042765821917,0.388076051348264,0.428674070063185,1.06404140185364,0.178368817602071,0.493647061806363,0.304464949114599,0,0.63549621259146,0.661585194164886,0.32977250588296,0.484393280087717,0.0603129249281559,0.238744688006273,0,0,6.67531087237835,0,0.619160603889667,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,1.01987057996313,0.419854356970974,0.690999869022119,0,0.474503990371703,0,0.540026704109006,0.418176592028937,0.436725127492355,0.539457385539283,0.330613822901344,0.26175594198403,0.648074866458964,0,12.9649375897364,0.448549638131936,0.827292452285488,0.972255941720238,0.516639293910924,0.844780627453891,1.5256441023948,0.911430693907651,2.41176492179135,9.42178071221424,12.0972602628303,0,0.405450430580328,0.308132871494482,0.129920822977795,0.895133478337407,0.39736270956253,0.120195449519969,0.147689527174577,0.605798699688886,0.381034033274999,0.201652370273681,0.0974578807397524,0.288635524920988,0.467507608726276,0.453460767230423,0.221985953374065,0,0.167884616364078,0.772758376128762,0,0.183151624267265,0,0.501572104035363,3.3885110557024,3.68260189205742,3.43737308063638,3.43706364687375,2.74033007908257,4.5323633843382,2.70009000092722,4.5032120322422,2.71885445390523,4.65984280576638,0.103787347584177,2.79317411380722,1.70733605754134,0.729320151204882,0.628839487883947,0.367687016900028,0.888986911206461,1.64828045791115,1.28367683836726,1.51618327058278,0.25347929989024,1.69763707247469,1.12369808963859,1.15245274328765,1.43588672389033,2.38146845641537,0.579421629724277,1.35036454324594,0.412085900803307,1.61918812147837,1.37147700954166,1.06485483695602,0.238436189947321,1.30811774969096,0.941093804153306,1.09998990259179,1.4634237829821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| |||
|short_description=p1@uc009uxy.1 | |||
}} |
Revision as of 19:41, 14 September 2013
Short description: | p1@uc009uxy.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc009uxy.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | -1bp_to_uc009uxy.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.03e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.03e-16 | 23 |
neuron | 1.95e-11 | 33 |
neuronal stem cell | 1.95e-11 | 33 |
neuroblast | 1.95e-11 | 33 |
electrically signaling cell | 1.95e-11 | 33 |
electrically responsive cell | 1.54e-08 | 39 |
electrically active cell | 1.54e-08 | 39 |
ectodermal cell | 1.59e-07 | 44 |
neurectodermal cell | 1.59e-07 | 44 |
neural cell | 4.25e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.