FFCP PHASE1:Mm9::chrX:71176173..71176190,-: Difference between revisions
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{{FFCP | 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| ||
|EntrezGene=19703 | |||
|HGNC= | |||
|UniProt=P82343 | |||
|association_with_transcript=0bp_to_ENSMUST00000033762,ENSMUST00000116578,NM_001164704,NM_023132,uc009tnj.2,uc009tnk.2,uc012hkm.1_5end | |||
|description=CAGE_peak_2_at_Renbp_5end | |||
|id=chrX:71176173..71176190,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,7.85e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.64e-08,120;UBERON:0004120,4.64e-08,120;UBERON:0006603,4.64e-08,120;UBERON:0000010,2.39e-07,11;UBERON:0002410,7.85e-07,9 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0.171200729931206,0.262261207256992,0,0.202475267389826,1.39912375625629,2.5236973228659,1.64537320326887,2.12194825899015,0.765389611359628,4.26951090163807,3.13439746966722,0.47997726838022,0.91763712426868,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,1.90509202037889,1.84519436275371,0,0,0.166234645358492,0.204169356262369,0.837063261473815,1.5626706890476,1.0470474879476,1.17646297606203,0.683045484958446,1.94204141212461,4.15459499319405,4.1564541800001,2.56965453026354,6.25913075478431,2.8343270329458,1.5378032791413,1.36100929351998,2.65974201088189,4.31257693094915,3.35565212115473,0,0,1.02903774414379,3.43840127926508,1.54701627683233,0.202316460859598,0,0.633831403506179,4.74382344896785,3.55717918444456,6.29929802096979,3.9554654502679,7.8152812644071,1.79760066311043,2.68952813725088,0.414758449233911,0.405017814995072,0.630974884054146,0,0.883474163806454,0.244981598429908,0.287536413054709,1.83843757322004,0,0.510749352340751,0.153606533256243,0.263772575460388,0.640413505216868,1.04182674111352,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.996601765593721,0.186399445825301,1.4387976733305,2.56943304363071,1.73918693221007,0.860423876981386,0,0,1.29955283489534,0,0.280888840263504,0,0,0,2.53518155598025,0,0,7.11066703153331,0.649473123033642,1.26679932737549,0,0.34255163915718,0.776813650941515,1.33597925158342,1.21439728736295,2.13125834818499,2.07553947530453,1.05505848386836,1.41106448562846,0.628332956648377,1.48316980640624,0.144599356919912,0,1.13236794963186,0,0,0,0.292780797011547,0,0.255457055208591,1.43778149407104,1.79970819298022,1.90605340609597,0.299581278809645,0,0,0,0.255715457330331,0.20778804455956,0.324482526135515,2.03678727700633,0.995255764880744,2.0217820674694,0.210441855886474,1.30120442962704,1.14951052216736,0.900310649026746,0.753524089178575,1.29269348387523,1.15302348256365,0.843315521037559,0.517406741478031,0.646703978798527,1.13463648100692,0.351902248327898,1.53437012699302,0.278047249225598,0,1.85203922767149,2.7864797354589,0,1.80143534980301,1.42081749697796,2.48550927042602,0.938104239924385,1.08037236876609,0.710234206755631,0.787056926989615,1.23413690309903,3.0229412817553,1.60964040839772,1.86824547787471,1.97471819896177,0.820837320395476,0.324275238183423,0.438599962275997,0.439100230582101,0.805238512562231,0,0.205809224758569,0,0,1.2797295032114,0.928946687441754,1.54640953586512,2.01683524623343,6.0042071838115,4.1849637744763,0.949058123089023,3.12928013975621,4.27269854960458,2.18852119245266,3.8992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0,0.685491075658373,1.1270773567308,1.22190796707189,2.52138233317913,2.59502533594179,1.7706230394792,1.47610147979602,1.41298855057237,1.60416313098341,0.296452627087149,0.83422552858047,0.589676985339609,0.224862112384854,0.202860121388503,0.241177159752417,1.01850340712568,0,1.62135226775035,0.823684239564244,1.43768206527355,0.744281895337007,0.312037673114561,0,0.358794827043824,0.964887042726734,0.184753190166605,0.947457058852424,0.325929952884052,1.18821560042632,0,1.34005005953453,1.19021820443007,0.780534591431195,0.630540576424764,1.10732344824387,2.23236676120482,0.491589944147214,1.20879487306127,1.01254341007058,4.52373851817817,2.71952841909355,0.491764273019036,0.827810238914197,0,0,0.163934945376675,1.00988370881749,3.15508219416257,1.95219372148319,2.58508077279359,3.82350076724083,4.01037613348309,1.98153571552183,4.45291771842384,3.50707029493574,4.34816555741176,0,2.12910127812403,3.20518086601059,2.28041743095006,2.3095817216155,0,2.91336763385978,0.302323556964751,0.377210159511796,0.295301892880773,0.922305443831782,1.29214146584111,0.727067458955011,0.712994756769443,0,0,1.03135543248187,0,1.08036656418786,2.58717367565509,3.00071849044229,0.886701168211368,1.07021290561242,1.15184314421485,0.304464949114599,2.11204537257339,1.48282449604674,1.54369878638473,0.49465875882444,0.484393280087717,1.26657142349127,0.716234064018819,0.820704498725306,0.874442509889552,0.370850604021019,0.854354403989263,2.06386867963222,0.925972636848558,0.565105371014073,1.23024804948923,1.60144721244566,2.20971958992012,2.37917468950219,1.65839968565309,0,0.949007980743406,1.82987520414164,2.16010681643603,0.627264888043406,0.218362563746178,1.21377911746339,0.330613822901344,0,0.518459893167171,1.86401793926078,0,1.04661582230785,1.48912641411388,1.16670713006429,1.54991788173277,2.70329800785245,1.64300134104056,1.3020438484395,0.734015410979976,0.483168241652012,0,1.26404448251271,1.82452693761148,1.64337531463724,1.94881234466693,1.9692936523423,2.58285761215644,1.20195449519969,1.47689527174577,1.41353029927407,0.990688486514998,1.31074040677893,0.584747284438515,1.25075394132428,1.98690733708667,0.226730383615211,2.88581739386284,1.61484941897056,1.84673078000486,1.35232715822533,2.25218970541418,2.93042598827624,1.2862102744744,0,0,0,0,0.3437063646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| |||
|short_description=p2@Renbp | |||
}} | |||
Revision as of 20:05, 14 September 2013
| Short description: | p2@Renbp |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Renbp_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000033762, ENSMUST00000116578, NM_001164704, NM_023132, uc009tnj.2, uc009tnk.2, uc012hkm.1_5end |
| EntrezGene: | Renbp |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| autonomic neuron | 7.85e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 4.64e-08 | 120 |
| mesoderm-derived structure | 4.64e-08 | 120 |
| presumptive mesoderm | 4.64e-08 | 120 |
| peripheral nervous system | 2.39e-07 | 11 |
| autonomic nervous system | 7.85e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
