FFCP PHASE1:Mm9::chrX:90531838..90531861,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11878|HGNC=|MCL_coexpression_id=184|UniProt=O35085|association_with_transcript=0bp_to_ENSMUST00000046565,ENSMUST00000113947,uc009tsq.1_5end|description=CAGE_peak_1_at_Arx_5end|id=chrX:90531838..90531861,+|ontology_enrichment_celltype=CL:0000117!8.98e-09!23;CL:0000337!8.98e-09!23;CL:0002319!4.45e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.73e-08,23;CL:0000337,1.73e-08,23;CL:0002609,9.27e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!6.25e-18!29;UBERON:0003528!6.25e-18!29;UBERON:0001893!6.25e-18!29;UBERON:0002020!3.35e-17!34;UBERON:0003080!1.23e-14!40;UBERON:0002780!1.40e-14!39;UBERON:0001890!1.40e-14!39;UBERON:0006240!1.40e-14!39;UBERON:0000956!2.47e-14!21;UBERON:0001869!2.47e-14!21;UBERON:0000203!2.47e-14!21;UBERON:0000955!1.17e-13!50;UBERON:0006238!1.17e-13!50;UBERON:0001017!3.66e-13!73;UBERON:0005743!3.66e-13!73;UBERON:0002616!4.61e-13!49;UBERON:0003056!3.51e-12!49;UBERON:0000073!4.15e-12!75;UBERON:0001016!4.15e-12!75;UBERON:0001049!6.68e-12!52;UBERON:0005068!6.68e-12!52;UBERON:0006241!6.68e-12!52;UBERON:0007135!6.68e-12!52;UBERON:0002619!7.82e-12!17;UBERON:0000033!2.28e-10!63;UBERON:0002346!3.52e-10!71;UBERON:0003075!3.52e-10!71;UBERON:0007284!3.52e-10!71;UBERON:0000991!8.02e-10!18;UBERON:0005564!8.02e-10!18;UBERON:0004176!3.30e-09!17;UBERON:0009196!3.30e-09!17;UBERON:0009117!3.30e-09!17;UBERON:0004121!1.47e-08!102;UBERON:0000924!1.47e-08!102;UBERON:0006601!1.47e-08!102;UBERON:0003135!7.31e-08!15;UBERON:0000473!8.80e-08!14;UBERON:0002021!3.72e-07!10;UBERON:0000411!3.72e-07!10;UBERON:0001950!3.72e-07!10;UBERON:0003101!6.74e-07!16;UBERON:0000079!6.74e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.57e-21,29;UBERON:0002791,1.57e-21,29;UBERON:0001893,1.57e-21,29;UBERON:0002020,1.54e-18,34;UBERON:0003080,2.75e-18,40;UBERON:0002780,3.22e-18,39;UBERON:0001890,3.22e-18,39;UBERON:0006240,3.22e-18,39;UBERON:0000956,1.27e-17,21;UBERON:0001869,1.27e-17,21;UBERON:0000203,1.27e-17,21;UBERON:0000955,2.95e-16,47;UBERON:0006238,2.95e-16,47;UBERON:0002616,1.66e-15,46;UBERON:0000073,2.01e-15,54;UBERON:0002619,1.77e-14,17;UBERON:0001017,7.17e-14,73;UBERON:0001049,1.49e-13,52;UBERON:0005068,1.49e-13,52;UBERON:0006241,1.49e-13,52;UBERON:0007135,1.49e-13,52;UBERON:0001016,4.92e-13,75;UBERON:0003056,2.19e-12,49;UBERON:0000991,3.35e-11,18;UBERON:0005564,3.35e-11,18;UBERON:0004176,1.94e-10,17;UBERON:0009196,1.94e-10,17;UBERON:0009117,1.94e-10,17;UBERON:0003135,8.92e-09,15;UBERON:0000473,1.18e-08,14;UBERON:0002021,1.33e-08,10;UBERON:0000411,1.33e-08,10;UBERON:0001950,1.33e-08,10;UBERON:0002346,1.71e-08,64;UBERON:0003075,1.71e-08,64;UBERON:0007284,1.71e-08,64;UBERON:0003133,3.16e-08,24;UBERON:0003101,6.57e-08,16;UBERON:0000079,6.57e-08,16;UBERON:0001954,2.48e-07,7;UBERON:0003022,2.48e-07,7;UBERON:0002421,2.48e-07,7;UBERON:0000349,2.48e-07,7;UBERON:0002600,2.48e-07,7;UBERON:0005156,4.32e-07,26;UBERON:0000990,4.32e-07,26;UBERON:0003886,5.76e-07,38;UBERON:0004121,5.99e-07,95;UBERON:0000924,5.99e-07,95;UBERON:0006601,5.99e-07,95;UBERON:0002323,9.17e-07,37;UBERON:0004458,9.17e-07,37|phase1_expression=0.160148847104794,0,0,0,0,3.3575854382378,4.67225281191051,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,5.52781385981954,0,0,0.159992422793407,1.14704640533585,0,0,0.861884930743556,0.570070258369122,0.756090389279792,1.10865255327652,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,163.736892441715,100.176899326919,99.5481083260331,29.6771213845769,17.2503077237966,0,0,0,0.514518872071894,0,0,3.23706337375356,1.5869729378161,6.97214543856797,2.37191172448392,5.33576877666684,0,0,0,14.6804054154018,39.1902671427986,63.3543531204798,90.7239905588961,80.7647851589307,0.285650984403804,0.662605622854841,227.46541414217,270.6676101555,431.1136109201,13.2139057199266,6.76742891851495,5.22262213071228,85.4623144491656,58.9180424799518,84.3879660301951,0.279182999001381,8.4414391504752,12.071061574368,2.35702868378934,0.569486723196412,2.42319279572891,0,0,0,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,3.81667718885499,0.913396434936424,0.922461989024234,0.60289056221049,8.58397562090645,0.628332956648377,0,0.144599356919912,0,0.808834249737046,0.441683036920787,0,1.86391761218122,0,0,0,0,0,0,1.49790639404823,24.2475319493872,88.083700831118,23.9877561865342,15.0872119824895,11.2205544062162,14.4394724130304,34.4217049814069,1.8661045591514,3.0326731012041,0.210441855886474,0.260240885925407,0.229902104433473,0.720248519221397,0.30140963567143,0.0680364991513279,0.2562274405697,0.374806898238915,0,0.215567992932842,1.70195472151037,1.23165786914764,2.84954452155847,2.22437799380478,1.0447564995665,0.823128545631774,57.5209031105445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9775451135921,41.4705587888516,0.991256348951394,0.264450566663544,1.70630600428187,1.85789337488351,0.515469845288373,0.403367049246685,0.444756087689741,0.380451252225118,1.89811624617805,0.494096864172033,0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| ||
|EntrezGene=11878 | |||
|HGNC= | |||
|MCL_coexpression_id=184 | |||
|UniProt=O35085 | |||
|association_with_transcript=0bp_to_ENSMUST00000046565,ENSMUST00000113947,uc009tsq.1_5end | |||
|description=CAGE_peak_1_at_Arx_5end | |||
|id=chrX:90531838..90531861,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.98e-09!23;CL:0000337!8.98e-09!23;CL:0002319!4.45e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.73e-08,23;CL:0000337,1.73e-08,23;CL:0002609,9.27e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!6.25e-18!29;UBERON:0003528!6.25e-18!29;UBERON:0001893!6.25e-18!29;UBERON:0002020!3.35e-17!34;UBERON:0003080!1.23e-14!40;UBERON:0002780!1.40e-14!39;UBERON:0001890!1.40e-14!39;UBERON:0006240!1.40e-14!39;UBERON:0000956!2.47e-14!21;UBERON:0001869!2.47e-14!21;UBERON:0000203!2.47e-14!21;UBERON:0000955!1.17e-13!50;UBERON:0006238!1.17e-13!50;UBERON:0001017!3.66e-13!73;UBERON:0005743!3.66e-13!73;UBERON:0002616!4.61e-13!49;UBERON:0003056!3.51e-12!49;UBERON:0000073!4.15e-12!75;UBERON:0001016!4.15e-12!75;UBERON:0001049!6.68e-12!52;UBERON:0005068!6.68e-12!52;UBERON:0006241!6.68e-12!52;UBERON:0007135!6.68e-12!52;UBERON:0002619!7.82e-12!17;UBERON:0000033!2.28e-10!63;UBERON:0002346!3.52e-10!71;UBERON:0003075!3.52e-10!71;UBERON:0007284!3.52e-10!71;UBERON:0000991!8.02e-10!18;UBERON:0005564!8.02e-10!18;UBERON:0004176!3.30e-09!17;UBERON:0009196!3.30e-09!17;UBERON:0009117!3.30e-09!17;UBERON:0004121!1.47e-08!102;UBERON:0000924!1.47e-08!102;UBERON:0006601!1.47e-08!102;UBERON:0003135!7.31e-08!15;UBERON:0000473!8.80e-08!14;UBERON:0002021!3.72e-07!10;UBERON:0000411!3.72e-07!10;UBERON:0001950!3.72e-07!10;UBERON:0003101!6.74e-07!16;UBERON:0000079!6.74e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.57e-21,29;UBERON:0002791,1.57e-21,29;UBERON:0001893,1.57e-21,29;UBERON:0002020,1.54e-18,34;UBERON:0003080,2.75e-18,40;UBERON:0002780,3.22e-18,39;UBERON:0001890,3.22e-18,39;UBERON:0006240,3.22e-18,39;UBERON:0000956,1.27e-17,21;UBERON:0001869,1.27e-17,21;UBERON:0000203,1.27e-17,21;UBERON:0000955,2.95e-16,47;UBERON:0006238,2.95e-16,47;UBERON:0002616,1.66e-15,46;UBERON:0000073,2.01e-15,54;UBERON:0002619,1.77e-14,17;UBERON:0001017,7.17e-14,73;UBERON:0001049,1.49e-13,52;UBERON:0005068,1.49e-13,52;UBERON:0006241,1.49e-13,52;UBERON:0007135,1.49e-13,52;UBERON:0001016,4.92e-13,75;UBERON:0003056,2.19e-12,49;UBERON:0000991,3.35e-11,18;UBERON:0005564,3.35e-11,18;UBERON:0004176,1.94e-10,17;UBERON:0009196,1.94e-10,17;UBERON:0009117,1.94e-10,17;UBERON:0003135,8.92e-09,15;UBERON:0000473,1.18e-08,14;UBERON:0002021,1.33e-08,10;UBERON:0000411,1.33e-08,10;UBERON:0001950,1.33e-08,10;UBERON:0002346,1.71e-08,64;UBERON:0003075,1.71e-08,64;UBERON:0007284,1.71e-08,64;UBERON:0003133,3.16e-08,24;UBERON:0003101,6.57e-08,16;UBERON:0000079,6.57e-08,16;UBERON:0001954,2.48e-07,7;UBERON:0003022,2.48e-07,7;UBERON:0002421,2.48e-07,7;UBERON:0000349,2.48e-07,7;UBERON:0002600,2.48e-07,7;UBERON:0005156,4.32e-07,26;UBERON:0000990,4.32e-07,26;UBERON:0003886,5.76e-07,38;UBERON:0004121,5.99e-07,95;UBERON:0000924,5.99e-07,95;UBERON:0006601,5.99e-07,95;UBERON:0002323,9.17e-07,37;UBERON:0004458,9.17e-07,37 | |||
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|short_description=p1@Arx | |||
}} |
Revision as of 20:15, 14 September 2013
Short description: | p1@Arx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arx_5end |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | 0bp_to_ENSMUST00000046565, ENSMUST00000113947, uc009tsq.1_5end |
EntrezGene: | Arx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.73e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.73e-08 | 23 |
neuron of cerebral cortex | 9.27e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.