FFCP PHASE1:Hg19::chr1:1288102..1288115,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3767 | |||
|description=CAGE_peak_at_chr1:1288102..1288115,- | |||
|id=chr1:1288102..1288115,- | |||
|ontology_enrichment_celltype=CL:0000055!3.84e-12!180;CL:0002620!4.38e-09!23;CL:0002334!1.32e-08!12;CL:0000057!1.91e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002579;4.09e-13;3!CL:0002620;5.42e-13;23!CL:0002580;1.29e-12;3!CL:0002334;4.17e-12;12!CL:0002591;6.91e-10;1!CL:0000057;4.98e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,4.09e-13,3;CL:0002620,5.61e-13,23;CL:0002580,9.95e-13,3;CL:0002334,3.67e-12,12;CL:0000057,5.06e-12,76;CL:0002591,8.99e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;6.91e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,8.24e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.08e-07!45;UBERON:0002416!2.08e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.70e-14;6!UBERON:0002358;3.70e-14;6!UBERON:0003684;3.70e-14;6!UBERON:0001178;3.70e-14;6!UBERON:0004457;1.30e-09;9!UBERON:0000042;1.30e-09;9!UBERON:0000310;1.77e-08;10!UBERON:0001443;9.46e-08;11!UBERON:0002097;3.08e-07;41!UBERON:0002199;4.15e-07;46!UBERON:0002416;4.15e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.62e-14,6;UBERON:0002358,3.62e-14,6;UBERON:0003684,3.62e-14,6;UBERON:0001178,3.62e-14,6;UBERON:0002097,1.74e-09,41;UBERON:0000310,1.52e-08,10;UBERON:0002199,2.25e-08,46;UBERON:0002416,2.25e-08,46;UBERON:0001443,8.23e-08,11;UBERON:0004457,2.51e-07,12;UBERON:0000042,2.51e-07,12 | |||
|phase1_expression=3.99692434395225,0,3.94672331468719,0,0,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,1.09220686065086,0.263766978228454,0.37129905888014,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69870898099936,0.50133791063589,0,0.795285947051099,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,0,0,0,0,1.06748995729705,0,0,0,0,0.605429710579726,0,0.70296429550139,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.640672166455702,1.69545520927649,0,0,0,1.67505170698431,1.5189869901714,0.68205903612839,0.252433774244115,2.39329736469978,0,1.06502877754984,0.10075209822764,1.3564847384839,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.387815147273333,10.7296933755565,0,0.797814349754612,0,0.514414748524284,0,0,0,2.17048642156577,0,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,1.71768088406796,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0,1.80567659836631,0,0,0,0,0.260650843404249,3.52442083432933,0,0,0,0,0.303127571446259,1.66435439510497,0,3.47350930946288,1.99500565274481,0,13.0701932240815,5.62877973973374,0,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.322260734604821,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0.94443704049192,0,0.308033580176089,0,0,0.74129687641568,0,0.372158369359667,0.632758849437452,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0,0,0.9554993798559,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0.342976018874837,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.285906176706625,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.430333232356058,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr1:1288102..1288115,- | |||
}} |
Revision as of 15:46, 10 January 2014
Short description: | p@chr1:1288102..1288115, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:1288102..1288115, - |
Coexpression cluster: | C3767_Preadipocyte_Mesenchymal_Adipocyte_Chondrocyte_Pericytes_Fibroblast_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 4.09e-13 | 3 |
skin fibroblast | 5.61e-13 | 23 |
preadipocyte of the breast | 9.95e-13 | 3 |
preadipocyte | 3.67e-12 | 12 |
fibroblast | 5.06e-12 | 76 |
smooth muscle cell of the pulmonary artery | 8.99e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.62e-14 | 6 |
peritoneum | 3.62e-14 | 6 |
abdominal cavity | 3.62e-14 | 6 |
visceral peritoneum | 3.62e-14 | 6 |
skin of body | 1.74e-09 | 41 |
breast | 1.52e-08 | 10 |
integument | 2.25e-08 | 46 |
integumental system | 2.25e-08 | 46 |
chest | 8.23e-08 | 11 |
cavity lining | 2.51e-07 | 12 |
serous membrane | 2.51e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 8.24e-10 | 1 |