FFCP PHASE1:Hg19::chr1:8484142..8484232,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=473 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=61bp_to_ENST00000465125_5end | |||
|description=CAGE_peak_10_at_RERE_5end | |||
|id=chr1:8484142..8484232,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-11!115;UBERON:0001009!7.24e-08!113;UBERON:0000479!1.48e-07!787;UBERON:0004535!4.33e-07!110;UBERON:0003081!5.24e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002193;6.02e-07;42!UBERON:0002390;7.84e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.43e-12,315;UBERON:0004120,1.43e-12,315;UBERON:0006603,1.43e-12,315;UBERON:0007023,5.83e-12,114;UBERON:0000479,3.35e-10,773;UBERON:0003081,2.84e-08,203;UBERON:0001009,1.04e-07,112;UBERON:0004535,6.42e-07,109 | |||
|phase1_expression=1.2717486548939,4.49611100171065,2.11431606143957,3.00219895059391,3.5756887554183,0,0,1.89515962028049,6.26845507679612,2.45733936501509,4.18680700783456,3.9319446983431,2.90143676051299,1.23766352960047,2.98257638155124,0,1.20538905604795,0.730310090387373,0,4.30923703268758,5.91602004608334,3.44800193625897,1.43117993565528,2.73748850145768,2.00868223351684,4.35556412763322,3.28402357799783,5.35233312933019,2.75354993794233,1.91914699048606,1.70297735647684,0,1.50602959389125,0.739508020333575,1.54934401160603,0.568676929949686,1.17440175733939,3.32397245119126,4.41197784434312,5.20826089718044,4.92614043327834,5.50619232232265,5.6666624879521,1.59938062657521,0.755751887377619,1.4555043671269,0.232429036905685,1.23350366406548,1.23882548358041,3.45230870786581,4.61089271752381,1.89185783910868,1.03423704220986,0,5.41705946377367,0.564727018627814,0,0.224723484445085,1.53041946185451,0.641858054152187,1.91801137739712,12.8642007072819,8.37747362010854,8.95071976118658,0.580418477257168,0,0.622822248995575,5.02497330513487,1.5644487552606,1.73751075764093,1.81619850790011,0,0.316462387440884,0.422510572623884,1.70083439972035,0.419317291016752,2.47122988522289,2.55300717830561,3.53596290733576,0.855038231223746,1.59133341759272,0.182664153764634,7.03984977845291,1.63841583378639,3.55803701545422,1.28019066769952,0.800791974072025,2.29900975981793,0.661044872784862,4.77026877267682,6.26134266020393,4.69789751496751,4.20500550937752,2.64342657158052,1.12101712596307,0.263384084775077,2.9506465517075,3.53709686474248,4.31763147898969,1.17030546773475,0.651844533267181,3.31413464014313,0,0.445641827540694,1.76763544484902,1.99380505125259,1.62482318259009,1.40900451698243,2.08094956095805,3.12432018746985,1.93445012450094,0.289803085735052,1.92772532110679,1.87278579662799,1.04535523804977,1.24640276967323,1.14966148080576,2.40539211837841,2.78321661221453,2.54852331459277,4.55758417699493,0.950452044448374,1.95747654801105,2.17577238962511,3.74792179657038,2.8413270245282,0,4.63695509416885,4.01160293675261,5.93780055919476,17.0664806419773,1.34140171940727,2.17366355134002,2.53007406669196,0,0.869079113764942,0,1.45990461090791,2.17430079477356,2.88248216701333,2.63504357079378,4.45328856692223,1.09288586487763,0.741568885568859,1.29818957461873,0.522389211897802,0.664789802594326,9.53962497221368,11.4398982156026,4.82894751728434,2.18638648103376,1.72046919021225,2.08284300964557,2.26123176769604,0.419499436209906,1.10047216776027,2.50793959844173,1.8089173141853,2.84613010149368,1.67360306382335,1.61131726843659,2.28081631715554,2.19655851793353,2.20597848207521,0,3.30408994651095,2.02076435363553,2.25222960966644,0,1.89853131913626,1.28241220751285,9.22462922052443,7.75560528296651,0,1.98788780678127,1.01304409331664,1.72131935057184,3.15520282823695,2.12801029319014,1.68203280042692,2.1349799145941,0.98667019366864,6.22422070799533,2.55950276932407,3.59616186849609,5.14615253992767,1.72852777344,3.28050004567315,1.87296046098192,2.85235910772225,1.19558944441441,2.93586246609412,2.91371299862637,1.82586048712923,1.22492502752936,0.859840221182376,1.65321249881225,2.37600571456411,0.741800787835671,13.6524204290704,19.4026898290384,1.85169725349473,3.1279629967991,2.21651292387346,1.75591048352335,0.919463387397059,1.20190447125277,1.81491493056034,2.69084453533293,1.2813443329114,2.11931901159562,3.60109315301283,2.88547081867629,2.31876486041066,1.8611685633159,2.36286865137773,3.11798416515836,2.52433774244115,2.66944706062668,1.45481451136931,1.42003837006646,1.71278566986988,2.88253006927829,1.54608682530637,0.545492241181669,0.573609190778008,0.853815942907168,1.19276791489337,0.929551542956147,0.725627385107593,0.756962552626885,1.09493207722749,0,0,2.76269842704961,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,0,2.80483547606892,5.3504621473082,16.1709582524096,0,0.982827216677626,1.18157981336281,0.441463099414651,0,1.20097467208968,0.658501712451753,0,1.00528972411631,0.648119116109707,2.28065813717227,5.19967392639789,4.3299402607582,1.04337364477569,2.11335649624479,2.59859605969933,0.925971025153221,2.09279567458058,0,0,3.69325509131096,0.234004265139238,1.63494278517601,0.93733833986777,0.839910640994298,0.708875486211932,0.179117045405697,1.45316969256981,0.766765358330422,1.47798971368783,3.25779205848936,15.5496086655579,15.5649549690318,20.0725469147944,0.507983154337352,0.381988425558278,0,1.71072446022705,0.308482478109971,0.300343057843917,0.285826432630578,6.05507855464948,4.3596006883328,2.12681028880755,2.06834745212444,14.3062578340753,0.845302752556,1.86156681609409,2.08014873822732,4.8869401109807,4.25547396069835,5.59486575933809,3.0025378668211,1.62786481617433,3.29296134712308,0.977208552881205,1.77695974371273,1.58390374586686,1.50719688529793,0.871533458600294,3.09916272664377,0,3.51579964002488,0,2.87549826589899,2.29723871668228,7.13184525203592,1.59259437334337,2.4657158706046,2.50685348535854,2.24170287987055,5.12279976525011,2.58753089831421,2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| |||
|short_description=p10@RERE | |||
}} |
Revision as of 16:09, 10 January 2014
Short description: | p10@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | 61bp_to_ENST00000465125_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.43e-12 | 315 |
mesoderm-derived structure | 1.43e-12 | 315 |
presumptive mesoderm | 1.43e-12 | 315 |
adult organism | 5.83e-12 | 114 |
tissue | 3.35e-10 | 773 |
lateral plate mesoderm | 2.84e-08 | 203 |
circulatory system | 1.04e-07 | 112 |
cardiovascular system | 6.42e-07 | 109 |