FFCP PHASE1:Hg19::chr1:8763296..8763339,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=473 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000468247_5end | |||
|description=CAGE_peak_9_at_RERE_5end | |||
|id=chr1:8763296..8763339,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.15e-13!659;UBERON:0000467!1.05e-11!625;UBERON:0000480!1.22e-11!626;UBERON:0004111!2.92e-09!241;UBERON:0003914!5.55e-09!118;UBERON:0000922!9.81e-09!612;UBERON:0000062!1.01e-08!511;UBERON:0002050!3.55e-08!605;UBERON:0005423!3.55e-08!605;UBERON:0000466!5.92e-08!126;UBERON:0004119!6.36e-08!169;UBERON:0000925!6.36e-08!169;UBERON:0006595!6.36e-08!169;UBERON:0000923!6.40e-08!604;UBERON:0005291!6.40e-08!604;UBERON:0006598!6.40e-08!604;UBERON:0002532!6.40e-08!604;UBERON:0005177!1.43e-07!107;UBERON:0000926!1.54e-07!448;UBERON:0004120!1.54e-07!448;UBERON:0006603!1.54e-07!448;UBERON:0000477!1.75e-07!286;UBERON:0001007!1.99e-07!155;UBERON:0001555!1.99e-07!155;UBERON:0007026!1.99e-07!155;UBERON:0004921!5.07e-07!129;UBERON:0004185!5.07e-07!129;UBERON:0000025!8.79e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.07e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.59e-09,117;UBERON:0004111,1.37e-08,240;UBERON:0005177,2.55e-08,101 | |||
|phase1_expression=1.2717486548939,1.71280419112787,0.704772020479856,1.0007329835313,0.446961094427288,0.872338524100369,0,1.26343974685366,1.30592814099919,2.21160542851358,2.79120467188971,1.74753097704138,2.11013582582763,0.247532705920093,0.994192127183747,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,1.60057375499824,1.83600622119828,1.88072832886853,1.14494394852423,2.05311637609326,1.75759695432724,1.37544130346312,1.14940825229924,0.708397031823113,1.96682138424452,0,1.39334510984468,0.919421224478927,0.30120591877825,1.84877005083394,0,0.284338464974843,0,1.10799081706375,2.60707781711184,0,3.13481663935894,2.91504299417082,1.54545340580512,0.436194716338694,1.13362783106643,0.485168122375632,0,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0.47296445977717,0.689491361473237,1.29096936716765,1.35426486594342,1.50593871634084,0.272906150057846,0.898893937780338,0.918251677112708,0.962787081228281,0.639337125799041,0,1.19678194572979,0.426224750532694,1.16083695451434,0.56738522469114,0,1.50749199154046,1.0429658368404,0.217188844705117,2.42159801053347,0.368277635987565,0.949387162322653,1.90129757680748,2.55125159958052,1.46761051855863,1.34794357375794,1.20141514273205,3.2145117339416,2.85012743741249,2.98375015798635,1.64397738388171,3.51992488922645,2.73069305631066,1.77901850772711,1.70692089026603,1.60158394814405,2.87376219977242,0.661044872784862,1.90810750907073,3.41527781465669,3.52342313622563,2.29363936875137,1.32171328579026,1.68152568894461,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0.779873198196215,0.294605907474837,0,0,0.768547918354051,0.390178042679635,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,7.31420598941885,0,1.91793842765295,0,0,0.434539556882471,0.795285947051099,0,0.472674085820339,0.886917589850256,0.87834785693126,3.73290365168481,3.27865759463288,0.741568885568859,6.81549526674835,6.79105975467142,4.25465473660369,0.715471872916026,0,1.48583000531826,7.35420907256809,4.30117297553062,2.42998351125316,4.52246353539208,2.09749718104953,1.92582629358047,3.55291443112578,2.32575083252396,2.84613010149368,5.69025041699939,2.41697590265488,3.04108842287405,0.976248230192678,2.57364156242108,0,3.75058858793135,6.73588117878509,6.86930030948266,1.53316637465883,5.69559395740877,3.29763139074733,0,0,2.61656431285521,1.98788780678127,2.02608818663328,2.1185468930115,3.15520282823695,1.77334191099179,1.68203280042692,1.06748995729705,2.22000793575444,1.8672662123986,2.69421344139376,1.9615428373615,3.48122083583342,1.15235184896,2.34321431833797,1.24864030732128,0.570471821544449,1.79338416662161,2.46612447151906,2.91371299862637,1.54495887372473,1.42907919878425,1.71968044236475,1.54988671763648,8.31602000097437,4.45080472701402,4.55080680969013,2.87447256726495,1.34668891163253,4.00379263590285,3.04770527032601,1.75591048352335,0.30648779579902,4.95785594391769,0.340296549480063,1.4351170855109,0.213557388818567,1.69545520927649,0.900273288253207,1.33968288009971,1.28820270022815,1.30281799432113,1.35021065793013,1.16924406193438,3.02920529092937,1.10459878370759,2.58633690910099,1.06502877754984,0.906768884048762,0.67824236924195,0.57978255948989,0.545492241181669,0.573609190778008,2.5614478287215,1.98794652482228,1.97529702878181,1.86589899027667,0.756962552626885,4.37972830890996,0,0,0,0,0,0.591534000199219,0.674338760312407,0.482022059766964,0.220587945464788,0.435758888184812,0,0.539325232640658,0.784885860501384,0.769494313892781,2.95262181849859,1.40241773803446,2.4694440679884,2.94017422771084,2.53510069643662,2.94848165003288,2.95394953340702,0,2.09080345523293,0.686271241194102,0.439001141634502,0,0.301586917234893,0.185176890317059,6.19035780089617,2.07986957055916,0,0.231860809950154,0.821860859650752,1.58803092537181,0.925971025153221,1.52203321787679,5.53143078571493,1.71697232418975,3.44703808522356,2.34004265139238,3.71577905721821,0,0.671928512795438,0.283550194484773,0.985143749731331,0.871901815541886,1.53353071666084,24.1404986569012,2.28925928434388,11.1957182392017,12.5384359472756,14.1391525437546,1.07946420296687,2.67391897890794,0,1.71072446022705,0.308482478109971,0.600686115687835,0,2.35475277125258,1.30788020649984,0.5867062865676,4.52451005152222,0,0,1.32969058292435,5.2003718455683,0.514414748524284,0,0.799266537048298,2.00169191121407,0.542621605391443,1.64648067356154,0,1.42156779497018,0,0.904318131178758,0.871533458600294,1.29964888536674,0,1.00451418286425,0,1.19812427745791,0,1.42636905040718,0.144781306667579,0.821905290201534,0.358121926479791,1.2329365839288,0,0.215627574859517,0,2.28685161800217,0,0,0,0,3.74503511973591,0,0.828831026872071,0.49076596687656,0,2.17012018959788,0.207970861530807,0.535286966391485,0.630809660135739,0.819989904948992,1.80567659836631,0,0,0.664225598535437,2.21243002250044,0.60818530127658,1.17480694477644,2.40200396667599,1.24060815673732,0.862856803274467,0.64036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| |||
|short_description=p9@RERE | |||
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Revision as of 16:09, 10 January 2014
Short description: | p9@RERE |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000468247_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial tube | 3.59e-09 | 117 |
anatomical conduit | 1.37e-08 | 240 |
trunk region element | 2.55e-08 | 101 |