FFCP PHASE1:Hg19::chr1:11919027..11919058,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4879 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7940 | |||
|TSSclassifier=strong | |||
|UniProt=P16860 | |||
|association_with_transcript=-35bp_to_NM_002521,uc001atj.2_5end | |||
|description=CAGE_peak_2_at_NPPB_5end | |||
|id=chr1:11919027..11919058,- | |||
|ontology_enrichment_celltype=CL:0000077!2.26e-26!19;CL:0000222!1.06e-12!119;CL:0000213!6.14e-11!57;CL:0000215!6.14e-11!57;CL:0000359!8.27e-08!32;CL:0000220!1.16e-07!246;CL:0002321!1.65e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.18e-35;19!CL:0002548;5.64e-09;6!CL:0000511;2.75e-07;1!CL:0002625;2.75e-07;1!CL:0000216;2.75e-07;1!CL:0002594;8.20e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.12e-35,19;CL:0000213,4.70e-12,58;CL:0000215,4.70e-12,58;CL:0000222,3.89e-10,121;CL:0000076,3.88e-09,63;CL:0002548,7.87e-09,6;CL:0000511,2.52e-07,1;CL:0002625,2.52e-07,1;CL:0000216,2.52e-07,1;CL:0002594,8.45e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.50e-07;1!UBERON:0010227;1.86e-07;1!UBERON:0010226;2.75e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.36e-12;2!DOID:178;2.04e-07;1!DOID:326;2.04e-07;1!DOID:3978;2.04e-07;1!DOID:3394;2.04e-07;1!DOID:5844;2.04e-07;1!DOID:2513;7.50e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.21e-12,2;DOID:178,2.10e-07,1;DOID:326,2.10e-07,1;DOID:3978,2.10e-07,1;DOID:3394,2.10e-07,1;DOID:5844,2.10e-07,1;DOID:2513,5.14e-07,1;DOID:1287,9.76e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!8.86e-15!27;UBERON:0004872!8.00e-12!84;UBERON:0003914!9.44e-12!118;UBERON:0000948!1.77e-10!24;UBERON:0005498!1.77e-10!24;UBERON:0004140!1.77e-10!24;UBERON:0009881!1.77e-10!24;UBERON:0004141!1.77e-10!24;UBERON:0003084!1.77e-10!24;UBERON:0007005!1.77e-10!24;UBERON:0004139!1.77e-10!24;UBERON:0004291!1.77e-10!24;UBERON:0001009!5.44e-10!113;UBERON:0001280!4.94e-09!4;UBERON:0004647!4.94e-09!4;UBERON:0003103!5.88e-09!69;UBERON:0001981!2.56e-08!60;UBERON:0007500!2.56e-08!60;UBERON:0004537!2.56e-08!60;UBERON:0006965!2.56e-08!60;UBERON:0004151!5.90e-08!3;UBERON:0004535!7.24e-08!110;UBERON:0000055!2.17e-07!69;UBERON:0003497!4.48e-07!3;UBERON:0003909!4.48e-07!3;UBERON:0003835!4.48e-07!3;UBERON:0001281!4.48e-07!3;UBERON:0003978!5.39e-07!3;UBERON:0009751!5.39e-07!3;UBERON:0000946!5.39e-07!3;UBERON:0002523!5.39e-07!3;UBERON:0005983!5.39e-07!3;UBERON:0002165!5.39e-07!3;UBERON:0002062!5.39e-07!3;UBERON:0007280!5.39e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.21e-26;25!UBERON:0004151;9.17e-19;3!UBERON:0000948;9.39e-16;22!UBERON:0002081;3.38e-13;2!UBERON:0001280;2.55e-08;3!UBERON:0004647;2.55e-08;3!UBERON:0002079;1.86e-07;1!UBERON:0002134;2.04e-07;1!UBERON:0005208;2.04e-07;1!UBERON:0004145;2.04e-07;1!UBERON:0005946;2.04e-07;1!UBERON:0005965;2.04e-07;1!UBERON:0002078;2.04e-07;1!UBERON:0002084;2.75e-07;1!UBERON:0001136;2.75e-07;1!UBERON:0001343;2.75e-07;1!UBERON:0002082;2.75e-07;1!UBERON:0004910;2.75e-07;1!UBERON:0004813;2.75e-07;1!UBERON:0001282;7.50e-07;1!UBERON:0009842;7.50e-07;1!UBERON:0003704;7.50e-07;1!UBERON:0001171;7.50e-07;1!UBERON:0001172;7.50e-07;1!UBERON:0001310;8.20e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.83e-24,27;UBERON:0004151,8.65e-19,3;UBERON:0000948,3.03e-14,24;UBERON:0005498,3.03e-14,24;UBERON:0004140,3.03e-14,24;UBERON:0009881,3.03e-14,24;UBERON:0004141,3.03e-14,24;UBERON:0003084,3.03e-14,24;UBERON:0007005,3.03e-14,24;UBERON:0004139,3.03e-14,24;UBERON:0004291,3.03e-14,24;UBERON:0002081,3.28e-13,2;UBERON:0010227,3.28e-13,2;UBERON:0004872,1.15e-10,83;UBERON:0001009,1.05e-09,112;UBERON:0001280,2.19e-08,3;UBERON:0004647,2.19e-08,3;UBERON:0005171,2.19e-08,3;UBERON:0003103,3.45e-08,68;UBERON:0003914,6.18e-08,117;UBERON:0002079,1.86e-07,1;UBERON:0002134,1.98e-07,1;UBERON:0005208,1.98e-07,1;UBERON:0005946,1.98e-07,1;UBERON:0005965,1.98e-07,1;UBERON:0002078,1.98e-07,1;UBERON:0001136,2.52e-07,1;UBERON:0001343,2.52e-07,1;UBERON:0004910,2.52e-07,1;UBERON:0005154,2.52e-07,1;UBERON:0005295,2.52e-07,1;UBERON:0004813,2.52e-07,1;UBERON:0005297,2.52e-07,1;UBERON:0005294,2.52e-07,1;UBERON:0010141,2.52e-07,1;UBERON:0005891,2.52e-07,1;UBERON:0002084,2.67e-07,1;UBERON:0002082,2.67e-07,1;UBERON:0010226,2.67e-07,1;UBERON:0001282,5.45e-07,1;UBERON:0009842,5.45e-07,1;UBERON:0003704,5.45e-07,1;UBERON:0001171,5.45e-07,1;UBERON:0001172,5.45e-07,1;UBERON:0001310,8.45e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,18.6757791741147,0.697801167972428,0,0.263766978228454,0,0,0,0.602694528023977,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40648818027883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,1.12135520028461,1.06748995729705,2.22000793575444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,1.34759371519982,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,2.1100756394171,5.22920075160176,8.69765023283896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.693138033939733,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572499546967965,0,0,0.190630193923825,0,0,0,1.56989728039846,0,0,0,0.404364963146632,0,0.842516912477962,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0,0,0,4.26111791621678,0.30982349809975,0,0,0,3.5667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82307289355202,0,0.897576444097721,2.93347904189422,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.558564802544508,0.458320848023367,6.46085722119133,6.38972801596772,1.71690419254628,1.78537165953498,18.408271461363,0.720599767084807,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0,7.14695326373367,4.63464379255802,0,0,0.864221491201268,0,0,0,0,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0.601030435988874,4.56966254602554,0.406870733204662,0,0.107410557042488,0,1.19428766609585,0,0,0,0,0,0.643324774124777,13.0497145982606,2.72047110614727,4.16740453782901,0.244736704506468,1.79088841081487,1.23520578864389,0.877136198314828,2.12026975135057,4.82285095677287,0.506827321959218,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,3.46762021122738,0,0.459474497674225,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@NPPB | |||
}} |
Revision as of 16:21, 10 January 2014
Short description: | p2@NPPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NPPB_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_NM_002521, uc001atj.2_5end |
EntrezGene: | NPPB |
HGNC: | 7940 |
UniProt: | P16860 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.12e-35 | 19 |
lining cell | 4.70e-12 | 58 |
barrier cell | 4.70e-12 | 58 |
mesodermal cell | 3.89e-10 | 121 |
squamous epithelial cell | 3.88e-09 | 63 |
cardiac fibroblast | 7.87e-09 | 6 |
androgen binding protein secreting cell | 2.52e-07 | 1 |
seminiferous tubule epithelial cell | 2.52e-07 | 1 |
Sertoli cell | 2.52e-07 | 1 |
smooth muscle cell of the umbilical artery | 8.45e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.21e-12 | 2 |
vascular disease | 2.10e-07 | 1 |
ischemia | 2.10e-07 | 1 |
extrinsic cardiomyopathy | 2.10e-07 | 1 |
myocardial ischemia | 2.10e-07 | 1 |
myocardial infarction | 2.10e-07 | 1 |
basal cell carcinoma | 5.14e-07 | 1 |
cardiovascular system disease | 9.76e-07 | 4 |