FFCP PHASE1:Hg19::chr1:22973979..22973997,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr1:22973979..22973997,+ | |||
|id=chr1:22973979..22973997,+ | |||
|ontology_enrichment_celltype=CL:0002619!1.61e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;5.84e-25;3!CL:0000235;3.00e-21;6!CL:0000840;2.06e-12;5!CL:0000990;1.94e-08;8!CL:0000451;5.53e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,5.86e-25,3;CL:0000235,3.09e-21,6;CL:0000840,2.06e-12,5;CL:0001029,2.06e-12,5;CL:0002194,1.42e-11,59;CL:0000576,1.42e-11,59;CL:0000040,1.42e-11,59;CL:0000559,1.42e-11,59;CL:0002009,3.80e-11,61;CL:0000839,3.43e-10,66;CL:0000557,5.11e-10,67;CL:0000766,3.22e-09,72;CL:0000990,1.94e-08,8;CL:0000451,5.53e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.48e-10;7!UBERON:0010115;6.98e-09;1!UBERON:0004874;6.98e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.90e-73!115;UBERON:0001049!6.16e-29!57;UBERON:0005068!6.16e-29!57;UBERON:0006241!6.16e-29!57;UBERON:0007135!6.16e-29!57;UBERON:0002616!8.57e-24!59;UBERON:0003080!1.59e-22!42;UBERON:0002020!5.26e-22!34;UBERON:0003528!5.26e-22!34;UBERON:0002780!4.84e-21!41;UBERON:0001890!4.84e-21!41;UBERON:0006240!4.84e-21!41;UBERON:0000955!2.24e-20!69;UBERON:0006238!2.24e-20!69;UBERON:0002791!3.00e-20!33;UBERON:0005743!4.21e-20!86;UBERON:0001017!4.43e-20!82;UBERON:0001893!1.65e-19!34;UBERON:0003075!5.62e-19!86;UBERON:0007284!5.62e-19!86;UBERON:0002346!1.01e-17!90;UBERON:0000073!2.51e-17!94;UBERON:0001016!2.51e-17!94;UBERON:0001869!8.94e-17!32;UBERON:0002619!1.02e-15!22;UBERON:0001950!2.96e-15!20;UBERON:0003056!6.67e-15!61;UBERON:0000153!6.07e-14!129;UBERON:0007811!6.07e-14!129;UBERON:0000956!1.77e-13!25;UBERON:0000203!1.77e-13!25;UBERON:0002298!2.51e-12!8;UBERON:0000062!2.61e-12!511;UBERON:0000033!4.71e-12!123;UBERON:0002308!1.05e-10!9;UBERON:0000125!1.05e-10!9;UBERON:0000025!2.31e-08!194;UBERON:0001871!2.35e-08!7;UBERON:0004121!2.50e-08!169;UBERON:0000468!5.19e-08!659;UBERON:0002420!6.14e-08!9;UBERON:0007245!6.14e-08!9;UBERON:0010009!6.14e-08!9;UBERON:0010011!6.14e-08!9;UBERON:0000454!6.14e-08!9;UBERON:0000924!6.24e-08!173;UBERON:0006601!6.24e-08!173;UBERON:0000477!7.03e-08!286;UBERON:0000467!8.09e-08!625;UBERON:0000480!9.01e-08!626;UBERON:0003076!1.40e-07!15;UBERON:0003057!1.40e-07!15;UBERON:0006331!2.26e-07!3;UBERON:0009663!2.58e-07!7;UBERON:0004111!2.83e-07!241;UBERON:0000988!8.79e-07!3;UBERON:0000064!9.26e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.79e-11;3!UBERON:0002363;6.98e-09;1!UBERON:0000029;6.98e-09;1!UBERON:0000989;6.98e-09;1!UBERON:0001301;6.98e-09;1!UBERON:0008811;6.98e-09;1!UBERON:0004177;3.20e-07;5!UBERON:0005057;3.20e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,8.17e-12,93;UBERON:0002106,1.66e-11,3;UBERON:0004854,1.66e-11,3;UBERON:0009034,1.66e-11,3;UBERON:0002095,1.66e-11,3;UBERON:0004782,1.66e-11,3;UBERON:0003281,1.66e-11,3;UBERON:0009664,1.66e-11,3;UBERON:0002296,1.66e-11,3;UBERON:0005602,1.66e-11,3;UBERON:0001179,1.66e-11,3;UBERON:0006293,1.66e-11,3;UBERON:0002193,7.30e-10,108;UBERON:0002390,2.26e-09,98;UBERON:0003061,2.26e-09,98;UBERON:0000989,5.31e-09,1;UBERON:0008811,5.31e-09,1;UBERON:0006258,5.31e-09,1;UBERON:0005876,5.31e-09,1;UBERON:0004874,5.31e-09,1;UBERON:0000029,5.75e-09,1;UBERON:0002363,6.22e-09,1;UBERON:0007645,6.22e-09,1;UBERON:0007647,6.22e-09,1;UBERON:0010115,6.22e-09,1;UBERON:0001301,9.17e-09,1;UBERON:0002371,1.18e-08,76;UBERON:0001474,6.53e-08,82;UBERON:0004765,4.50e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.5439401055856,27.8548552776322,25.4999811957845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,2.27183175558278,2.26368658489047,5.31831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18568910348575,0,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.53837055434615,10.5416969741516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.74214478529481,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.723578631752448,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,1.22206028986725,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.399358000997982,0.858452096273142,0.446342914883745,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,1.75862680413699,1.32506888912221,0.387848869084652,0.92562821219883,0,0,1.38823636338003,0,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0.665574309221114,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.798169295285756,0.615349092722265,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0.781078098613847,0.413373593002368,0.0634158101939068,0,0.548257766857182,1.48863353516788,0,0,0,0,0,0,0.532214220975833,0,0,0.0679697329768317,0,0,0,0.549451649953598,0.314231179832004,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0.463044948647668,0.437119121007915,0,0.245148321753905,0,0.785233868459781,0.297046400327086,0,0,3.10146929333517,2.57831551894309,0,0,0,0,0,0,0.860037498908708,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,1.65833887891756,0.517164979309476,1.27940389140589,0,0.387533459016037,0.931120714437869,0,0.12729431655633,0,0.217716747896961,0,0,0.645499848534087,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,1.00636896795513,0 | |||
|short_description=p@chr1:22973979..22973997,+ | |||
}} |
Revision as of 16:57, 10 January 2014
Short description: | p@chr1:22973979..22973997, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22973979..22973997, + |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 5.86e-25 | 3 |
macrophage | 3.09e-21 | 6 |
immature conventional dendritic cell | 2.06e-12 | 5 |
common dendritic progenitor | 2.06e-12 | 5 |
monopoietic cell | 1.42e-11 | 59 |
monocyte | 1.42e-11 | 59 |
monoblast | 1.42e-11 | 59 |
promonocyte | 1.42e-11 | 59 |
macrophage dendritic cell progenitor | 3.80e-11 | 61 |
myeloid lineage restricted progenitor cell | 3.43e-10 | 66 |
granulocyte monocyte progenitor cell | 5.11e-10 | 67 |
myeloid leukocyte | 3.22e-09 | 72 |
conventional dendritic cell | 1.94e-08 | 8 |
dendritic cell | 5.53e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
immune system | 8.17e-12 | 93 |
spleen | 1.66e-11 | 3 |
gastrointestinal system mesentery | 1.66e-11 | 3 |
stomach region | 1.66e-11 | 3 |
mesentery | 1.66e-11 | 3 |
gastrointestinal system serosa | 1.66e-11 | 3 |
mesentery of stomach | 1.66e-11 | 3 |
gut mesentery | 1.66e-11 | 3 |
dorsal mesentery | 1.66e-11 | 3 |
dorsal mesogastrium | 1.66e-11 | 3 |
peritoneal cavity | 1.66e-11 | 3 |
spleen primordium | 1.66e-11 | 3 |
hemolymphoid system | 7.30e-10 | 108 |
hematopoietic system | 2.26e-09 | 98 |
blood island | 2.26e-09 | 98 |
penis | 5.31e-09 | 1 |
intromittent organ | 5.31e-09 | 1 |
lateral plate mesenchyme | 5.31e-09 | 1 |
undifferentiated genital tubercle | 5.31e-09 | 1 |
somatopleure | 5.31e-09 | 1 |
lymph node | 5.75e-09 | 1 |
dura mater | 6.22e-09 | 1 |
future meninx | 6.22e-09 | 1 |
ectomeninx | 6.22e-09 | 1 |
future dura mater | 6.22e-09 | 1 |
epididymis | 9.17e-09 | 1 |
bone marrow | 1.18e-08 | 76 |
bone element | 6.53e-08 | 82 |
skeletal element | 4.50e-07 | 90 |