FFCP PHASE1:Hg19::chr1:27023752..27023799,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8289 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11110 | |||
|TSSclassifier=strong | |||
|UniProt=O14497 | |||
|association_with_transcript=0bp_to_AF521670_5end | |||
|description=CAGE_peak_4_at_ARID1A_5end | |||
|id=chr1:27023752..27023799,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.13e-21!182;CL:0000037!1.93e-21!172;CL:0000566!1.93e-21!172;CL:0002032!1.96e-19!165;CL:0000837!1.96e-19!165;CL:0000542!2.52e-19!53;CL:0000051!2.52e-19!53;CL:0000738!5.01e-19!140;CL:0000838!7.74e-19!52;CL:0000945!2.53e-14!24;CL:0000826!2.53e-14!24;CL:0002031!2.33e-12!124;CL:0002087!2.99e-11!119;CL:0000236!2.66e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.91e-24;24!CL:0000542;3.86e-17;53!CL:0000236;4.22e-12;13!CL:0000094;6.73e-10;8!CL:0000081;1.15e-08;11!CL:0000453;5.65e-07;5!CL:0000084;7.72e-07;25!CL:0000451;9.45e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.54e-31,53;CL:0000051,5.54e-31,53;CL:0000838,4.18e-30,52;CL:0000738,8.20e-29,136;CL:0000988,6.84e-28,177;CL:0000037,2.66e-27,168;CL:0000945,2.05e-24,24;CL:0000826,2.05e-24,24;CL:0002032,1.21e-23,161;CL:0000837,1.21e-23,161;CL:0002031,3.06e-16,120;CL:0002087,2.33e-15,115;CL:0000236,2.00e-13,14;CL:0000094,4.62e-10,8;CL:0000081,8.58e-09,11;CL:0000453,4.96e-07,5;CL:0000451,8.62e-07,10;CL:0000084,9.64e-07,25;CL:0000827,9.64e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;3.86e-17;53 | |||
|ontology_enrichment_disease=DOID:305!4.43e-09!106;DOID:162!7.08e-09!235;DOID:14566!5.16e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;2.16e-09;32!UBERON:0000178;1.02e-07;15!UBERON:0000179;1.02e-07;15!UBERON:0000463;1.02e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.49e-08,15;UBERON:0000179,8.49e-08,15;UBERON:0000463,8.49e-08,15 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.491467873003018,2.09340350391728,0.436882744260345,0,0,0,0,0,0,0,0.738726348460727,1.02000345622126,0,0.286235987131057,0.136874425072884,0.87879847716362,7.33568695180332,7.22485187159523,6.61170563034906,2.75354993794233,3.83829398097213,3.56077083626975,0,0,0,2.71135202031056,6.82412315939623,1.17440175733939,4.43196326825502,1.40381113229099,1.95309783644267,0.223915474239924,0,0,0.145398238779565,0.755751887377619,0.242584061187816,1.16214518452842,0.822335776043652,0,0.575384784644301,0.256160706529101,0.236482229888585,0,0,0,1.31769637679823,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0,0.56738522469114,1.24564449799115,0,0.521482918420201,0.217188844705117,1.81619850790011,0.736555271975129,0.949387162322653,0.211255286311942,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0.570025487482497,0,0.365328307529268,5.27988733383968,3.82297027883492,7.11607403090844,2.98711155796555,4.00395987036012,1.72425731986345,3.30522436392431,1.90810750907073,12.5226853204079,12.3319809767897,15.6732023531344,1.32171328579026,6.72610275577843,0,1.7703879310245,3.53709686474248,2.2616164889946,0.334372990781356,0.32592226663359,0.946895611469467,1.94826728407911,0.557052284425868,0.883817722424512,0.664601683750863,0.812411591295047,0.384273959177026,0.780356085359269,1.15106533222573,1.10540007114339,0.869409257205157,1.4828656316206,1.33770414044857,1.04535523804977,0.793165398882963,0.766440987203842,0.68725489096526,1.77113784413652,1.27426165729639,0,0,1.20460095262218,2.30375900077953,0,0.236777252044017,1.64225599384209,5.04016858061831,2.94184215361858,4.05508330871837,0,0,0,0.361439152384566,0,0,0,0,0.661743720148475,0.221729397462564,0.263504357079378,0.589405839739707,0,0.370784442784429,0.324547393654683,0.348259474598534,0.132957960518865,4.05434061319081,5.14795419702115,2.60020250930695,0.596287222100115,0,0,0.56530794192401,0.838998872419812,0.275118041940067,0.417989933073621,0,0.35576626268671,0.66944122552934,0.805658634218294,0,0.24406205754817,0.367663080345869,0,0.446498641420399,0.22452937262617,0.900891843866578,1.53316637465883,0,0,7.9068250461638,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0.576175924479999,1.64025002283658,0,0,0,0.23486899728753,0.647491777472526,0.280901613404497,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0.910161361938026,0.718618141816238,0.336672227908132,0.375355559615893,0,0.438977620880838,0,0,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0.573609190778008,1.46368447355514,0.662648841607426,0.464775771478074,0.932949495138334,0.504641701751257,0.36497735907583,0,0,0,0,0,0.473227200159376,0.505754070234305,0.241011029883482,1.43382164552112,0.871517776369625,1.42362371466658,0.539325232640658,0.196221465125346,0.769494313892781,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0.0925884451585296,0.977424915930974,0,0,0,0.352226082707465,0.433099343283221,0.462985512576611,0.761016608938393,0.790204397959275,0.858486162094873,0,0.468008530278475,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.766765358330422,21.1845192295256,0.352193736052904,5.59785911960085,7.49423757768199,4.67097003677606,0.063497894292169,1.14596527667483,1.17217447210047,0,0,0,0,0.224262168690721,0,0.1466765716419,0,3.57656445851882,0,0,0,0.257207374262142,0,1.0656887160644,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,4.81966119172167,6.5020150866636,7.33133754522359,7.31555306794566,1.27047312111232,0,0,0.335032530668698,0,3.74503511973591,2.99161459204025,6.21623270154053,0,0.500170521059677,0.271265023699736,0.623912584592421,0.178428988797162,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.195801157462741,0,3.92859249633486,2.5885704098234,2.02782359826544,0.606255142892519,0,1.5119514666484,0,0,0,0.128139149255701,0.511707249066704,0,0,0.616838775210622,0,0.410635780069046,0,0.116210378459959,0.725156697549733,0.200506470303285,0.0920809889358963,0.229628896329213,0.182091168006717,0.131124414959424,0,0.308061348417659,1.56869953835371,0,0,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0.501689773854853,1.01950509218015,0.831076008928724,0.895499018888713,0.438519753291869,0.522870902049801,0,0.328014645699706,0.325378394664303,0.206082023295445,0.27470839445503,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.340906509664404,0.0890320356467374,0,0.192190067365106,0.893288987462089,0.4046311234222,0,0,0,0,0.532306030317022,0.869932992075073,0,0,0,0,0.190630193923825,1.02359116524534,0,0,0,0,0.54907405947211,0,0.20218248157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| |||
|short_description=p4@ARID1A | |||
}} |
Revision as of 17:16, 10 January 2014
Short description: | p4@ARID1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARID1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF521670_5end |
EntrezGene: | ARID1A |
HGNC: | 11110 |
UniProt: | O14497 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.54e-31 | 53 |
common lymphoid progenitor | 5.54e-31 | 53 |
lymphoid lineage restricted progenitor cell | 4.18e-30 | 52 |
leukocyte | 8.20e-29 | 136 |
hematopoietic cell | 6.84e-28 | 177 |
hematopoietic stem cell | 2.66e-27 | 168 |
lymphocyte of B lineage | 2.05e-24 | 24 |
pro-B cell | 2.05e-24 | 24 |
hematopoietic oligopotent progenitor cell | 1.21e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-23 | 161 |
hematopoietic lineage restricted progenitor cell | 3.06e-16 | 120 |
nongranular leukocyte | 2.33e-15 | 115 |
B cell | 2.00e-13 | 14 |
granulocyte | 4.62e-10 | 8 |
blood cell | 8.58e-09 | 11 |
Langerhans cell | 4.96e-07 | 5 |
dendritic cell | 8.62e-07 | 10 |
T cell | 9.64e-07 | 25 |
pro-T cell | 9.64e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood | 8.49e-08 | 15 |
haemolymphatic fluid | 8.49e-08 | 15 |
organism substance | 8.49e-08 | 15 |