FFCP PHASE1:Hg19::chr1:48462596..48462610,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388630 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=A6NFA1 | |||
|association_with_transcript=-34bp_to_NM_001194986_5end | |||
|description=CAGE_peak_4_at_LOC388630_5end | |||
|id=chr1:48462596..48462610,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.32e-13;1!UBERON:0010115;2.32e-13;1!UBERON:0003918;3.62e-11;10!UBERON:0007687;3.62e-11;10!UBERON:0003104;2.30e-09;31!UBERON:0007297;2.58e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-09!115;UBERON:0000473!1.33e-08!8;UBERON:0003135!4.63e-08!11;UBERON:0000466!1.54e-07!126;UBERON:0002417!4.98e-07!61;UBERON:0000916!4.98e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.32e-13;1!UBERON:0000998;2.32e-13;1!UBERON:0006868;2.32e-13;1!UBERON:0002360;2.58e-07;2!UBERON:0000094;2.58e-07;2!UBERON:0010743;2.58e-07;2!UBERON:0000473;7.99e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.32e-13,1;UBERON:0006868,2.32e-13,1;UBERON:0002363,2.62e-13,1;UBERON:0007645,2.62e-13,1;UBERON:0007647,2.62e-13,1;UBERON:0010115,2.62e-13,1;UBERON:0005172,5.81e-10,54;UBERON:0005173,5.81e-10,54;UBERON:0002417,6.65e-09,60;UBERON:0000916,6.65e-09,60;UBERON:0002113,2.03e-07,26;UBERON:0003918,2.03e-07,26;UBERON:0011143,2.03e-07,26;UBERON:0005095,2.03e-07,26;UBERON:0007687,2.03e-07,26;UBERON:0002360,2.74e-07,2;UBERON:0000094,2.74e-07,2;UBERON:0010743,2.74e-07,2;UBERON:0000473,7.22e-07,8 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0.312160076830321,0,0.149448680551801,0,0.485618833104395,0.280901613404497,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0.982827216677626,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,1.01950509218015,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,1.20990716048664,0,2.02197054811161,0,0,0,0,0,0,3.13070500632772,0,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0,0.201550417460179,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,0.412618309791701,0,0,0,0.0607495566580247,0,0.86686278029118,1.04909176269996,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77921302444875,0,0,0,0,3.33113974164331,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0.647782773655864,0,0.142953088353313,0,0,0,0,0,1.0243108625637,0.691259661814092,0,0,0,2.54032230114557,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.735444965261716,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0.730336388246517,0.458729283404541,0,0.631086248772738,0,0,0.5290268405154,0.371995018166751,0,0.432626562123789,0,0.218531143927391,0.506794004045748,0.407955318967927,0.26721740526556,0.459474497674225,1.50424523575425,0,0.803892390468535,0,0,0.426467963801962,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p4@LOC388630 | |||
}} |
Revision as of 18:27, 10 January 2014
Short description: | p4@LOC388630 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC388630_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_NM_001194986_5end |
EntrezGene: | LOC388630 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.32e-13 | 1 |
seminal fluid secreting gland | 2.32e-13 | 1 |
dura mater | 2.62e-13 | 1 |
future meninx | 2.62e-13 | 1 |
ectomeninx | 2.62e-13 | 1 |
future dura mater | 2.62e-13 | 1 |
abdomen element | 5.81e-10 | 54 |
abdominal segment element | 5.81e-10 | 54 |
abdominal segment of trunk | 6.65e-09 | 60 |
abdomen | 6.65e-09 | 60 |
kidney | 2.03e-07 | 26 |
kidney mesenchyme | 2.03e-07 | 26 |
upper urinary tract | 2.03e-07 | 26 |
kidney rudiment | 2.03e-07 | 26 |
kidney field | 2.03e-07 | 26 |
meninx | 2.74e-07 | 2 |
membrane organ | 2.74e-07 | 2 |
meningeal cluster | 2.74e-07 | 2 |
testis | 7.22e-07 | 8 |