FFCP PHASE1:Hg19::chr1:110546962..110546980,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10768 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=344 | |||
|TSSclassifier=not | |||
|UniProt=B4E168 | |||
|association_with_transcript=207bp_to_ENST00000393614,uc010ovx.1_5end | |||
|description=CAGE_peak_6_at_AHCYL1_5end | |||
|id=chr1:110546962..110546980,+ | |||
|ontology_enrichment_celltype=CL:0000187!9.32e-09!54;CL:0000192!1.11e-08!42;CL:0000514!1.11e-08!42;CL:0000680!4.07e-08!57;CL:0000056!4.07e-08!57;CL:0000355!4.07e-08!57;CL:0000183!1.11e-07!59;CL:0000077!1.28e-07!19;CL:0002539!1.97e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002539;1.95e-13;10!CL:0000359;1.74e-07;32!CL:0000192;7.35e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,2.93e-13,10;CL:0000192,6.04e-09,43;CL:0000514,6.04e-09,43;CL:0000187,6.73e-08,55;CL:0000359,8.88e-08,32;CL:0000680,3.04e-07,58;CL:0000056,3.04e-07,58;CL:0000355,3.04e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;7.35e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:120;4.89e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:120,2.28e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.92e-13!365;UBERON:0000481!1.62e-10!347;UBERON:0002385!1.95e-10!63;UBERON:0001015!1.95e-10!63;UBERON:0000383!1.95e-10!63;UBERON:0001134!4.72e-10!61;UBERON:0002036!4.72e-10!61;UBERON:0003082!4.72e-10!61;UBERON:0005743!5.03e-10!86;UBERON:0001049!6.08e-10!57;UBERON:0005068!6.08e-10!57;UBERON:0006241!6.08e-10!57;UBERON:0007135!6.08e-10!57;UBERON:0002616!6.32e-10!59;UBERON:0001017!8.24e-10!82;UBERON:0000477!1.03e-09!286;UBERON:0001135!2.42e-09!15;UBERON:0000955!2.58e-09!69;UBERON:0006238!2.58e-09!69;UBERON:0000483!4.63e-09!309;UBERON:0000119!6.71e-09!312;UBERON:0007023!8.43e-09!115;UBERON:0000073!1.49e-08!94;UBERON:0001016!1.49e-08!94;UBERON:0004111!2.06e-08!241;UBERON:0005156!2.90e-08!59;UBERON:0000990!2.90e-08!59;UBERON:0000025!3.80e-08!194;UBERON:0004290!8.39e-08!70;UBERON:0003075!1.67e-07!86;UBERON:0007284!1.67e-07!86;UBERON:0004237!1.97e-07!10;UBERON:0004695!1.97e-07!10;UBERON:0002111!1.97e-07!10;UBERON:0004178!1.97e-07!10;UBERON:0000914!5.13e-07!83;UBERON:0002329!5.13e-07!83;UBERON:0003077!5.13e-07!83;UBERON:0003059!5.13e-07!83;UBERON:0007282!5.13e-07!83;UBERON:0009618!5.13e-07!83;UBERON:0007285!5.13e-07!83;UBERON:0002346!6.85e-07!90;UBERON:0002308!6.99e-07!9;UBERON:0000125!6.99e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;8.88e-15;15!UBERON:0004237;1.95e-13;10!UBERON:0004695;1.95e-13;10!UBERON:0002111;1.95e-13;10!UBERON:0004178;1.95e-13;10!UBERON:0002385;1.02e-12;31!UBERON:0001015;1.02e-12;31!UBERON:0000383;1.02e-12;31!UBERON:0002298;1.45e-08;6!UBERON:0000125;2.26e-07;9!UBERON:0002308;2.26e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.50e-14,15;UBERON:0004237,2.93e-13,10;UBERON:0004695,2.93e-13,10;UBERON:0002111,2.93e-13,10;UBERON:0004178,2.93e-13,10;UBERON:0001134,2.28e-10,62;UBERON:0002036,2.28e-10,62;UBERON:0003082,2.28e-10,62;UBERON:0002385,7.52e-10,64;UBERON:0001015,7.52e-10,64;UBERON:0000383,7.52e-10,64;UBERON:0003104,8.45e-10,160;UBERON:0009142,8.45e-10,160;UBERON:0005256,3.29e-09,122;UBERON:0002298,1.17e-08,6;UBERON:0002329,2.76e-08,71;UBERON:0003059,2.76e-08,71;UBERON:0007282,2.76e-08,71;UBERON:0004290,2.76e-08,71;UBERON:0009618,2.76e-08,71;UBERON:0003077,4.35e-08,72;UBERON:0007285,4.35e-08,72;UBERON:0007524,6.74e-08,73;UBERON:0000483,7.69e-08,306;UBERON:0007503,9.56e-08,78;UBERON:0000119,1.26e-07,309;UBERON:0000125,2.82e-07,9;UBERON:0002308,2.82e-07,9;UBERON:0001896,8.39e-07,3;UBERON:0005290,8.39e-07,3;UBERON:0010096,8.39e-07,3;UBERON:0000490,9.92e-07,148 | |||
|phase1_expression=0.181678379270557,0,1.12763523276777,1.0007329835313,0,0,0,0,0,0,0,0,0,1.11389717664042,0.994192127183747,2.01697543935533,1.20538905604795,1.46062018077475,1.95173119516203,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,0.639312809217652,0.361439152384566,0,0.434539556882471,1.5905718941022,0.486634870302636,0.378139268656271,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.662045904066094,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,1.24484414159907,0.404132016209064,0.163461903113459,2.4217188423189,5.18558332031999,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0.103325781175765,1.18800285728205,0.989067717114227,0,0.718618141816238,0,0,0,0,0,0.600952235626387,0,0,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0.558350568994769,0,0.0974370051611986,0.252433774244115,0,0.484938170456436,0.355009592516614,0.201504196455281,0.339121184620975,0,0,0,0.243947412259191,0.132529768321485,0.929551542956147,0.932949495138334,0,0,0,0,0,3.25057549622385,1.44375896333917,0.473227200159376,0.168584690078102,0,0,0.653638332277218,0.237270619111097,0.539325232640658,0.98110732562673,0,0,0,0,0,0,0,0,0,0,1.88724591328378,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,2.81780866165972,0,0,0,0,0,0,0.936017060556951,0.148631162288728,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0.2933531432838,7.36848779819333,0,0,0.26593811658487,0,0,0,0,3.0025378668211,0,0,0,1.42156779497018,0,3.01439377059586,2.61460037580088,2.89921674427965,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,2.94459580125936,2.00068208423871,1.62759014219841,0,0.892144943985809,0.473107245101804,0.468565659970853,0.601892199455438,2.27407504055985,1.03473071292505,0,0.368738337083406,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0.512556597022804,0,0.804269605718038,0,0.154209693802656,0,0.492762936082855,2.07701771673448,0.116210378459959,0,0,0,1.60740227430449,1.45672934405374,1.44236856455367,0.451199612907412,0.308061348417659,0,0,1.26661954671451,0,0,0,0,1.08378575017541,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0,0,1.07420244868274,0.725083469571143,0,0.623224249527161,0.661139661443912,0.192190067365106,0,0.2023155617111,1.39453664789186,2.20368642781448,1.3940745403212,0.308033580176089,1.06461206063404,3.47973196830029,0.55597265731176,0.429374660225974,0,0.316379424718726,2.2875623270859,0,0,0.636406495851874,0,1.61885211824983,1.09814811894422,1.29593642580255,1.2130948894399,0,0.421258456238981,0.48763373908959,0,0,0.9554993798559,2.54529777516683,0,1.65409603063837,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0.563391205064483,1.14729081763241,2.16147890228867,0,0.354761064070598,0.422215270595328,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.54736358051564,0.445234820091624,0,0,0,0,0,0.511343412510774,0.246169610922139,0.933118762985422,0.0898683511473268,1.25314822272926,0,0.197286811273867,0,0,0,1.02044907978036,0,0.520855522170466,3.23601999985924,0,0.227586896570999,1.01701460117107,0.236387681767936,0,0,0,0.885741385813839,2.05013945663194,0,0.552896299656123,0.295547618953547,0.658156191461918,0.653630781113941,0,1.00035336054936,0,0,0.987334088507493,1.52106320690811,0,0.183195186803725,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,3.59112177950125,0,0,0,0,0,0,0,0,2.29163852134302,3.21031058919516,0.937057782901357,0,0.19566461893209,0,0.394584402849391,0,0,0.758238955541855,0,0.207376382794494,0,0,0,0,1.42304773014896,0,1.56203764501618,0.391969589657511,1.56706571844725,0.52418000472609,0.171986032471617,0.483781656445426,0.146178634172371,0.656923656425674,0.193978032976839,0,0,1.37041924646751,0.794858446811959,0.443175571691151,0.391102765469606,2.48492342779755,0,0,0,0,0,0,2.11229310461235,0.235694034616795,0.135904206073614,0,0.305994652908965,0.288950589901519,1.80126086612937,2.0535806833799,0,0,0,0,0,0,0.599037001496973,0,0,0,0.720599767084807,0,0,0,0,0,0.846733320657845,0.795229689809303,1.49823746722733,0,0,0,0,0,0.364497339948148,0,0.945668487590378,0.262272940674991,0.528001682597033,0.179287339332845,0,0,0.662091970365432,0,0,5.18532894720761,1.95952416065645,2.39460383124975,0,0.511164065356265,0.113312091520126,0,0,2.32709321450791,4.23144325576608,0,3.52407511158336,0.533937062838473,0.314408610199332,0,0,0,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| |||
|short_description=p6@AHCYL1 | |||
}} |
Revision as of 20:02, 10 January 2014
Short description: | p6@AHCYL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AHCYL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 207bp_to_ENST00000393614, uc010ovx.1_5end |
EntrezGene: | AHCYL1 |
HGNC: | 344 |
UniProt: | B4E168 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 2.93e-13 | 10 |
smooth muscle cell | 6.04e-09 | 43 |
smooth muscle myoblast | 6.04e-09 | 43 |
muscle cell | 6.73e-08 | 55 |
vascular associated smooth muscle cell | 8.88e-08 | 32 |
muscle precursor cell | 3.04e-07 | 58 |
myoblast | 3.04e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.04e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.50e-14 | 15 |
blood vessel smooth muscle | 2.93e-13 | 10 |
arterial system smooth muscle | 2.93e-13 | 10 |
artery smooth muscle tissue | 2.93e-13 | 10 |
aorta smooth muscle tissue | 2.93e-13 | 10 |
skeletal muscle tissue | 2.28e-10 | 62 |
striated muscle tissue | 2.28e-10 | 62 |
myotome | 2.28e-10 | 62 |
muscle tissue | 7.52e-10 | 64 |
musculature | 7.52e-10 | 64 |
musculature of body | 7.52e-10 | 64 |
mesenchyme | 8.45e-10 | 160 |
entire embryonic mesenchyme | 8.45e-10 | 160 |
trunk mesenchyme | 3.29e-09 | 122 |
brainstem | 1.17e-08 | 6 |
somite | 2.76e-08 | 71 |
presomitic mesoderm | 2.76e-08 | 71 |
presumptive segmental plate | 2.76e-08 | 71 |
dermomyotome | 2.76e-08 | 71 |
trunk paraxial mesoderm | 2.76e-08 | 71 |
paraxial mesoderm | 4.35e-08 | 72 |
presumptive paraxial mesoderm | 4.35e-08 | 72 |
dense mesenchyme tissue | 6.74e-08 | 73 |
epithelium | 7.69e-08 | 306 |
epithelial vesicle | 9.56e-08 | 78 |
cell layer | 1.26e-07 | 309 |
neural nucleus | 2.82e-07 | 9 |
nucleus of brain | 2.82e-07 | 9 |
medulla oblongata | 8.39e-07 | 3 |
myelencephalon | 8.39e-07 | 3 |
future myelencephalon | 8.39e-07 | 3 |
unilaminar epithelium | 9.92e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 2.28e-07 | 27 |