FFCP PHASE1:Hg19::chr1:116311091..116311100,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=845 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1513 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=61bp_to_CU692536,DQ893219,DQ896548_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_8_at_CASQ2_5end | |||
|id=chr1:116311091..116311100,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.58e-26;1!UBERON:0010227;8.64e-26;1!UBERON:0005062;1.49e-07;4!UBERON:0007284;1.49e-07;4 | |||
|ontology_enrichment_disease=DOID:114!9.52e-14!2;DOID:178!1.06e-07!1;DOID:326!1.06e-07!1;DOID:3978!1.06e-07!1;DOID:3394!1.06e-07!1;DOID:5844!1.06e-07!1;DOID:1287!2.76e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.14e-50;2!DOID:178;3.58e-26;1!DOID:326;3.58e-26;1!DOID:3978;3.58e-26;1!DOID:3394;3.58e-26;1!DOID:5844;3.58e-26;1!DOID:1287;5.94e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.82e-51,2;DOID:178,2.78e-26,1;DOID:326,2.78e-26,1;DOID:3978,2.78e-26,1;DOID:3394,2.78e-26,1;DOID:5844,2.78e-26,1;DOID:1287,5.23e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.40e-18!115;UBERON:0003103!2.87e-14!69;UBERON:0007100!1.77e-13!27;UBERON:0003978!2.96e-09!3;UBERON:0009751!2.96e-09!3;UBERON:0000946!2.96e-09!3;UBERON:0002523!2.96e-09!3;UBERON:0005983!2.96e-09!3;UBERON:0002165!2.96e-09!3;UBERON:0002062!2.96e-09!3;UBERON:0007280!2.96e-09!3;UBERON:0004151!3.77e-09!3;UBERON:0001723!4.79e-09!3;UBERON:0001033!4.79e-09!3;UBERON:0010056!4.79e-09!3;UBERON:0002146!1.20e-07!1;UBERON:0005623!1.20e-07!1;UBERON:0002426!1.36e-07!1;UBERON:0003831!1.36e-07!1;UBERON:0003898!1.36e-07!1;UBERON:0004830!1.36e-07!1;UBERON:0001774!1.36e-07!1;UBERON:0003830!1.36e-07!1;UBERON:0005175!1.36e-07!1;UBERON:0003897!1.36e-07!1;UBERON:0001103!1.36e-07!1;UBERON:0010084!1.36e-07!1;UBERON:0002079!1.44e-07!1;UBERON:0002135!1.74e-07!1;UBERON:0002084!2.09e-07!1;UBERON:0002082!2.09e-07!1;UBERON:0004706!2.09e-07!1;UBERON:0000989!2.37e-07!1;UBERON:0008811!2.37e-07!1;UBERON:0006258!2.37e-07!1;UBERON:0005876!2.37e-07!1;UBERON:0004874!2.37e-07!1;UBERON:0000998!2.67e-07!1;UBERON:0006868!2.67e-07!1;UBERON:0002336!6.97e-07!1;UBERON:0001018!6.97e-07!1;UBERON:0002473!6.97e-07!1;UBERON:0005340!6.97e-07!1;UBERON:0002316!6.97e-07!1;UBERON:0003544!6.97e-07!1;UBERON:0001020!6.97e-07!1;UBERON:0005970!6.97e-07!1;UBERON:0002437!6.97e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;3.58e-26;1!UBERON:0005623;3.58e-26;1!UBERON:0002079;8.64e-26;1!UBERON:0002426;8.64e-26;1!UBERON:0003831;8.64e-26;1!UBERON:0003898;8.64e-26;1!UBERON:0004830;8.64e-26;1!UBERON:0003830;8.64e-26;1!UBERON:0005175;8.64e-26;1!UBERON:0001774;8.64e-26;1!UBERON:0001103;8.64e-26;1!UBERON:0007100;2.25e-16;25!UBERON:0000341;1.29e-13;2!UBERON:0005090;1.29e-13;2!UBERON:0001630;1.29e-13;2!UBERON:0002081;1.29e-13;2!UBERON:0003978;1.19e-09;3!UBERON:0000946;1.19e-09;3!UBERON:0001723;1.60e-09;3!UBERON:0004151;1.60e-09;3!UBERON:0001033;1.60e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,4.61e-26,1;UBERON:0005623,4.61e-26,1;UBERON:0002426,7.62e-26,1;UBERON:0003831,7.62e-26,1;UBERON:0003898,7.62e-26,1;UBERON:0004830,7.62e-26,1;UBERON:0003830,7.62e-26,1;UBERON:0005175,7.62e-26,1;UBERON:0001774,7.62e-26,1;UBERON:0001103,7.62e-26,1;UBERON:0010084,7.62e-26,1;UBERON:0002079,9.79e-26,1;UBERON:0007100,3.42e-15,27;UBERON:0005090,1.21e-13,2;UBERON:0001630,1.21e-13,2;UBERON:0002081,1.37e-13,2;UBERON:0010227,1.37e-13,2;UBERON:0000341,1.55e-13,2;UBERON:0003978,1.30e-09,3;UBERON:0009751,1.30e-09,3;UBERON:0000946,1.30e-09,3;UBERON:0002523,1.30e-09,3;UBERON:0005983,1.30e-09,3;UBERON:0002165,1.30e-09,3;UBERON:0002062,1.30e-09,3;UBERON:0007280,1.30e-09,3;UBERON:0001723,1.41e-09,3;UBERON:0001033,1.41e-09,3;UBERON:0010056,1.41e-09,3;UBERON:0004151,1.67e-09,3;UBERON:0003103,2.19e-09,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,2.29160424011684,0,2.59582700648688,11.1598772515508,0.446342914883745,0.873385142327441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1903221573187,0,0,0,0,0,0.217716747896961,1.71116650542641,0,0,0.665320713092027,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |||
|short_description=p8@CASQ2 | |||
}} |
Revision as of 20:19, 10 January 2014
Short description: | p8@CASQ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CASQ2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 61bp_to_CU692536, DQ893219, DQ896548_5end |
EntrezGene: | CASQ2 |
HGNC: | 1513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 4.61e-26 | 1 |
semi-lunar valve | 4.61e-26 | 1 |
chest muscle | 7.62e-26 | 1 |
respiratory system muscle | 7.62e-26 | 1 |
skeletal muscle of trunk | 7.62e-26 | 1 |
respiratory system skeletal muscle | 7.62e-26 | 1 |
thoracic segment muscle | 7.62e-26 | 1 |
chest organ | 7.62e-26 | 1 |
muscle of trunk | 7.62e-26 | 1 |
diaphragm | 7.62e-26 | 1 |
future diaphragm | 7.62e-26 | 1 |
left cardiac atrium | 9.79e-26 | 1 |
primary circulatory organ | 3.42e-15 | 27 |
muscle structure | 1.21e-13 | 2 |
muscle organ | 1.21e-13 | 2 |
cardiac atrium | 1.37e-13 | 2 |
future cardiac atrium | 1.37e-13 | 2 |
throat | 1.55e-13 | 2 |
valve | 1.30e-09 | 3 |
cardiac mesenchyme | 1.30e-09 | 3 |
cardial valve | 1.30e-09 | 3 |
tunica intima | 1.30e-09 | 3 |
heart layer | 1.30e-09 | 3 |
endocardium | 1.30e-09 | 3 |
endocardial cushion | 1.30e-09 | 3 |
presumptive endocardium | 1.30e-09 | 3 |
tongue | 1.41e-09 | 3 |
gustatory system | 1.41e-09 | 3 |
future tongue | 1.41e-09 | 3 |
cardiac chamber | 1.67e-09 | 3 |
compound organ | 2.19e-09 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.82e-51 | 2 |
vascular disease | 2.78e-26 | 1 |
ischemia | 2.78e-26 | 1 |
extrinsic cardiomyopathy | 2.78e-26 | 1 |
myocardial ischemia | 2.78e-26 | 1 |
myocardial infarction | 2.78e-26 | 1 |
cardiovascular system disease | 5.23e-26 | 4 |