FFCP PHASE1:Hg19::chr1:145039310..145039326,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15580 | |||
|TSSclassifier=weak | |||
|UniProt=E9PJ85 | |||
|association_with_transcript=-232bp_to_ENST00000531369_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_35_at_PDE4DIP_5end | |||
|id=chr1:145039310..145039326,- | |||
|ontology_enrichment_celltype=CL:0002057!3.09e-85!42;CL:0000860!4.57e-79!45;CL:0000557!1.14e-60!71;CL:0000766!6.74e-60!76;CL:0002009!4.94e-59!65;CL:0000839!6.31e-58!70;CL:0002194!3.02e-57!63;CL:0000576!3.02e-57!63;CL:0000040!3.02e-57!63;CL:0000559!3.02e-57!63;CL:0000763!1.17e-40!112;CL:0000049!1.17e-40!112;CL:0000738!2.49e-39!140;CL:0002031!7.88e-36!124;CL:0002087!1.82e-35!119;CL:0000037!1.98e-30!172;CL:0000566!1.98e-30!172;CL:0002032!2.11e-28!165;CL:0000837!2.11e-28!165;CL:0000988!2.76e-28!182;CL:0000134!1.71e-14!358;CL:0002320!4.90e-14!365;CL:0000219!2.01e-12!390;CL:0000034!1.15e-10!444;CL:0000048!1.72e-10!430;CL:0000723!3.24e-10!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.96e-77;33!CL:0002057;4.96e-77;33!CL:0000473;4.11e-52;39!CL:0000234;4.11e-52;39!CL:0000576;6.14e-48;48!CL:0000766;9.95e-32;69!CL:0002393;8.27e-16;6!CL:0002397;8.27e-16;6!CL:0002087;6.21e-14;104!CL:0000763;9.19e-11;100!CL:0000738;1.25e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.62e-92,42;CL:0002057,6.62e-92,42;CL:0000473,3.89e-80,48;CL:0000234,3.89e-80,48;CL:0002194,1.19e-63,59;CL:0000576,1.19e-63,59;CL:0000040,1.19e-63,59;CL:0000559,1.19e-63,59;CL:0002009,1.60e-61,61;CL:0000839,9.30e-57,66;CL:0000557,6.88e-56,67;CL:0000766,6.72e-52,72;CL:0000763,5.86e-34,108;CL:0000049,5.86e-34,108;CL:0002087,9.26e-32,115;CL:0002031,2.41e-30,120;CL:0000738,1.66e-26,136;CL:0002032,5.08e-22,161;CL:0000837,5.08e-22,161;CL:0000037,5.31e-21,168;CL:0000988,8.29e-20,177;CL:0002393,9.96e-11,9;CL:0002397,9.96e-11,9;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-60;42!CL:0000049;3.48e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.83e-53!80;UBERON:0001474!7.13e-52!86;UBERON:0002390!2.24e-45!102;UBERON:0003061!2.24e-45!102;UBERON:0004765!4.75e-43!101;UBERON:0001434!4.75e-43!101;UBERON:0002193!1.25e-40!112;UBERON:0002405!1.25e-34!115;UBERON:0002204!6.05e-23!167;UBERON:0003081!1.01e-19!216;UBERON:0002384!2.06e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.43e-49,76;UBERON:0001474,2.33e-45,82;UBERON:0004765,3.69e-41,90;UBERON:0002405,9.07e-40,93;UBERON:0002390,1.23e-37,98;UBERON:0003061,1.23e-37,98;UBERON:0001434,7.64e-37,100;UBERON:0002193,5.86e-34,108;UBERON:0002204,3.84e-21,167;UBERON:0003081,6.02e-17,203;UBERON:0000926,5.77e-10,315;UBERON:0004120,5.77e-10,315;UBERON:0006603,5.77e-10,315;UBERON:0002384,4.95e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.619264493264304,0,0,0,0,0,0,6.64794490238253,6.01633342410425,4.77423915574874,0,0,0,0,0.755751887377619,0.485168122375632,0.464858073811369,1.6446715520873,3.09706370895104,1.7261543539329,2.56160706529101,2.60130452877444,10.3423704220986,18.719055823931,12.1883837934908,0.188242339542605,0,0.898893937780338,4.28517449319264,11.2325159476633,9.59005688698562,0,0.598390972864896,0.426224750532694,0.580418477257168,3.97169657283798,2.4912889959823,2.26123798731069,1.0429658368404,0.868755378820466,0,4.78760926783834,3.48108626184973,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p35@PDE4DIP | |||
}} |
Revision as of 20:28, 10 January 2014
Short description: | p35@PDE4DIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_PDE4DIP_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -232bp_to_ENST00000531369_5end |
EntrezGene: | PDE4DIP |
HGNC: | 15580 |
UniProt: | E9PJ85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.62e-92 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.62e-92 | 42 |
defensive cell | 3.89e-80 | 48 |
phagocyte | 3.89e-80 | 48 |
monopoietic cell | 1.19e-63 | 59 |
monocyte | 1.19e-63 | 59 |
monoblast | 1.19e-63 | 59 |
promonocyte | 1.19e-63 | 59 |
macrophage dendritic cell progenitor | 1.60e-61 | 61 |
myeloid lineage restricted progenitor cell | 9.30e-57 | 66 |
granulocyte monocyte progenitor cell | 6.88e-56 | 67 |
myeloid leukocyte | 6.72e-52 | 72 |
myeloid cell | 5.86e-34 | 108 |
common myeloid progenitor | 5.86e-34 | 108 |
nongranular leukocyte | 9.26e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 2.41e-30 | 120 |
leukocyte | 1.66e-26 | 136 |
hematopoietic oligopotent progenitor cell | 5.08e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-22 | 161 |
hematopoietic stem cell | 5.31e-21 | 168 |
hematopoietic cell | 8.29e-20 | 177 |
intermediate monocyte | 9.96e-11 | 9 |
CD14-positive, CD16-positive monocyte | 9.96e-11 | 9 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.43e-49 | 76 |
bone element | 2.33e-45 | 82 |
skeletal element | 3.69e-41 | 90 |
immune system | 9.07e-40 | 93 |
hematopoietic system | 1.23e-37 | 98 |
blood island | 1.23e-37 | 98 |
skeletal system | 7.64e-37 | 100 |
hemolymphoid system | 5.86e-34 | 108 |
musculoskeletal system | 3.84e-21 | 167 |
lateral plate mesoderm | 6.02e-17 | 203 |
mesoderm | 5.77e-10 | 315 |
mesoderm-derived structure | 5.77e-10 | 315 |
presumptive mesoderm | 5.77e-10 | 315 |
connective tissue | 4.95e-08 | 371 |