FFCP PHASE1:Hg19::chr1:151804314..151804321,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6097 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10260 | |||
|TSSclassifier=strong | |||
|UniProt=P51449,Q6I9R9 | |||
|association_with_transcript=26bp_to_ENST00000318247,NM_005060,uc001ezh.2,uc010pdo.1,uc010pdp.1_5end | |||
|description=CAGE_peak_4_at_RORC_5end | |||
|id=chr1:151804314..151804321,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.24e-14;1!UBERON:0010227;1.10e-13;1!UBERON:0005754;1.10e-13;1!UBERON:0007297;1.75e-07;2 | |||
|ontology_enrichment_disease=DOID:305!2.05e-10!106;DOID:0050687!3.93e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.59e-23!115;UBERON:0004921!1.45e-15!129;UBERON:0004185!1.45e-15!129;UBERON:0001041!2.13e-14!98;UBERON:0001007!4.09e-14!155;UBERON:0001555!4.09e-14!155;UBERON:0007026!4.09e-14!155;UBERON:0000077!8.53e-13!130;UBERON:0004119!7.48e-12!169;UBERON:0000925!7.48e-12!169;UBERON:0006595!7.48e-12!169;UBERON:0000481!1.05e-09!347;UBERON:0002530!3.20e-09!59;UBERON:0001004!3.59e-09!72;UBERON:0001048!3.61e-09!168;UBERON:0000062!1.02e-08!511;UBERON:0001557!1.90e-08!19;UBERON:0001737!2.78e-08!9;UBERON:0003104!2.85e-08!238;UBERON:0009142!2.85e-08!238;UBERON:0001044!1.01e-07!6;UBERON:0003293!1.01e-07!6;UBERON:0003294!1.01e-07!6;UBERON:0010047!1.01e-07!6;UBERON:0000167!1.01e-07!6;UBERON:0000065!9.85e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;4.24e-14;1!UBERON:0001567;4.24e-14;1!UBERON:0002079;1.10e-13;1!UBERON:0000998;1.10e-13;1!UBERON:0002171;1.10e-13;1!UBERON:0006868;1.10e-13;1!UBERON:0006518;1.10e-13;1!UBERON:0008949;1.10e-13;1!UBERON:0000101;1.10e-13;1!UBERON:0002167;1.10e-13;1!UBERON:0001044;2.61e-09;6!UBERON:0003293;2.61e-09;6!UBERON:0003294;2.61e-09;6!UBERON:0010047;2.61e-09;6!UBERON:0003408;2.61e-09;6!UBERON:0000167;2.61e-09;6!UBERON:0001041;1.09e-08;14!UBERON:0001829;1.09e-07;2!UBERON:0004089;1.09e-07;2!UBERON:0000341;1.75e-07;2!UBERON:0000007;1.75e-07;2!UBERON:0002081;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,4.53e-14,1;UBERON:0001567,4.53e-14,1;UBERON:0008801,4.53e-14,1;UBERON:0000998,6.65e-14,1;UBERON:0006868,6.65e-14,1;UBERON:0002079,9.73e-14,1;UBERON:0002171,1.61e-13,1;UBERON:0006518,1.61e-13,1;UBERON:0008949,1.61e-13,1;UBERON:0000101,1.61e-13,1;UBERON:0002167,1.61e-13,1;UBERON:0001044,2.66e-09,6;UBERON:0003293,2.66e-09,6;UBERON:0003294,2.66e-09,6;UBERON:0010047,2.66e-09,6;UBERON:0000167,2.66e-09,6;UBERON:0001829,1.12e-07,2;UBERON:0004089,1.12e-07,2;UBERON:0000341,1.28e-07,2;UBERON:0002081,1.64e-07,2;UBERON:0010227,1.64e-07,2;UBERON:0000007,2.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,0.537063524026827,0,0.197286811273867,0,0,0.969332746095218,0,0,0.260427761085233,0.174919999992391,0,0,0.254253650292766,1.65471377237555,0.344743373241465,0,0,0,0,0,1.3269511191747,0.591095237907095,0,0.653630781113941,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0.296521128680622,0,0.104421949505455,0.134802265961354,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.873633341210151,0,0.387025325156341,0.219267951258557,0.246346371159628,0.387956065953678,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0.49701014226173,1.64985824231757,0.135904206073614,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0.399358000997982,0.429226048136571,0.223171457441873,0.470284307407084,0,0,0.315132729228895,0.0824158583811665,0.202210631562555,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.524545881349981,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0.342173675768659,0,0.213574825135389,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,2.34454203369928,0,0,0.147856086217045,0,0,0,0,0,2.19303106742873,0.992422356778588,0,0,0,0.336283722218824,0.606965604236632,1.13831095675649,0,0,0.171488009437418,0,0,0.236387681767936,0,0.470958557103084,0,0,0,0.647782773655864,0.47775168788705,0.285906176706625,0,0,0,0,0.207216164163037,0.3414369541879,1.38251932362818,0.430227358820278,0,0,1.69354820076372,0,0,0,0.671132590786754,0.196300467230486,0.121917924982269,0.647428837187895,3.79852385368114,2.3196288626764,0.971421986118279,0,0.198950775161368,0,0,0,0.301925687133347,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,2.19100916473955,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0.535928260312357,0,0,0.213233981900981,1.90451545170992,0,0.0620747142958579,0,0.827413057616144,0.808468755832877,0.653150243690884,0.342233301085281,0.404112318087525,0.502055437748735,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@RORC | |||
}} |
Revision as of 20:51, 10 January 2014
Short description: | p4@RORC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RORC_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000318247, NM_005060, uc001ezh.2, uc010pdo.1, uc010pdp.1_5end |
EntrezGene: | RORC |
HGNC: | 10260 |
UniProt: | P51449Q6I9R9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 4.53e-14 | 1 |
cheek | 4.53e-14 | 1 |
parotid gland primordium | 4.53e-14 | 1 |
seminal vesicle | 6.65e-14 | 1 |
seminal fluid secreting gland | 6.65e-14 | 1 |
left cardiac atrium | 9.73e-14 | 1 |
lower lobe of right lung | 1.61e-13 | 1 |
right lung lobe | 1.61e-13 | 1 |
lower lobe of lung | 1.61e-13 | 1 |
lobe of lung | 1.61e-13 | 1 |
right lung | 1.61e-13 | 1 |
saliva-secreting gland | 2.66e-09 | 6 |
gland of oral region | 2.66e-09 | 6 |
gland of foregut | 2.66e-09 | 6 |
oral gland | 2.66e-09 | 6 |
oral cavity | 2.66e-09 | 6 |
major salivary gland | 1.12e-07 | 2 |
midface | 1.12e-07 | 2 |
throat | 1.28e-07 | 2 |
cardiac atrium | 1.64e-07 | 2 |
future cardiac atrium | 1.64e-07 | 2 |
pituitary gland | 2.40e-07 | 2 |