FFCP PHASE1:Hg19::chr1:156863470..156863521,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375033 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33631 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VY43,F2Z2F7,A6PVP2 | |||
|association_with_transcript=0bp_to_ENST00000338302,ENST00000444016,ENST00000455314_5end | |||
|description=CAGE_peak_1_at_PEAR1_5end | |||
|id=chr1:156863470..156863521,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.65e-19!119;CL:0000115!1.27e-17!35;CL:0002078!4.33e-17!44;CL:0002139!1.51e-16!24;CL:0000055!6.09e-15!180;CL:0000057!2.16e-13!75;CL:0000071!4.71e-13!18;CL:0002546!4.71e-13!18;CL:0000183!2.46e-12!59;CL:0000187!3.85e-10!54;CL:0000213!5.13e-10!57;CL:0000215!5.13e-10!57;CL:0000680!7.83e-09!57;CL:0000056!7.83e-09!57;CL:0000355!7.83e-09!57;CL:0000393!3.11e-08!60;CL:0000211!3.11e-08!60;CL:0000192!7.51e-08!42;CL:0000514!7.51e-08!42;CL:1000413!1.95e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.71e-17;24!CL:0000115;1.39e-15;36!CL:0000071;1.92e-13;18!CL:0002078;1.47e-11;45!CL:1000413;1.22e-07;9!CL:0000213;2.69e-07;58!CL:0000215;2.69e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.31e-19,121;CL:0000115,1.51e-18,36;CL:0002078,4.53e-18,45;CL:0002139,4.75e-17,24;CL:0000057,3.05e-14,76;CL:0000071,1.94e-13,18;CL:0002546,1.94e-13,18;CL:0000213,1.29e-10,58;CL:0000215,1.29e-10,58;CL:0000187,3.27e-10,55;CL:0000680,9.83e-09,58;CL:0000056,9.83e-09,58;CL:0000355,9.83e-09,58;CL:0000192,8.15e-08,43;CL:0000514,8.15e-08,43;CL:1000413,1.24e-07,9;CL:0000393,1.85e-07,61;CL:0000211,1.85e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;1.92e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!2.00e-30!113;UBERON:0004535!5.12e-30!110;UBERON:0002049!7.62e-29!79;UBERON:0007798!7.62e-29!79;UBERON:0004872!6.45e-25!84;UBERON:0000055!1.50e-24!69;UBERON:0000477!4.66e-22!286;UBERON:0003914!1.13e-21!118;UBERON:0001981!9.84e-21!60;UBERON:0007500!9.84e-21!60;UBERON:0004537!9.84e-21!60;UBERON:0006965!9.84e-21!60;UBERON:0000119!1.67e-20!312;UBERON:0004111!9.10e-20!241;UBERON:0000483!1.57e-19!309;UBERON:0000025!1.76e-17!194;UBERON:0005256!5.54e-14!143;UBERON:0000490!2.20e-13!138;UBERON:0001986!4.71e-13!18;UBERON:0004638!4.71e-13!18;UBERON:0004852!4.71e-13!18;UBERON:0000475!9.27e-13!365;UBERON:0000481!1.63e-12!347;UBERON:0000468!2.07e-12!659;UBERON:0001637!1.15e-11!42;UBERON:0003509!1.15e-11!42;UBERON:0004572!1.15e-11!42;UBERON:0000914!3.58e-11!83;UBERON:0002329!3.58e-11!83;UBERON:0003077!3.58e-11!83;UBERON:0003059!3.58e-11!83;UBERON:0007282!3.58e-11!83;UBERON:0009618!3.58e-11!83;UBERON:0007285!3.58e-11!83;UBERON:0000487!4.56e-11!22;UBERON:0007023!6.28e-11!115;UBERON:0002100!2.15e-10!216;UBERON:0002385!3.69e-10!63;UBERON:0001015!3.69e-10!63;UBERON:0000383!3.69e-10!63;UBERON:0001134!5.10e-10!61;UBERON:0002036!5.10e-10!61;UBERON:0003082!5.10e-10!61;UBERON:0003103!9.56e-10!69;UBERON:0004290!1.18e-09!70;UBERON:0006914!1.25e-09!25;UBERON:0000467!1.69e-09!625;UBERON:0000480!2.64e-09!626;UBERON:0000947!4.13e-09!21;UBERON:0010191!4.13e-09!21;UBERON:0004573!7.37e-09!33;UBERON:0004571!7.37e-09!33;UBERON:0000486!5.49e-08!82;UBERON:0004876!7.87e-08!20;UBERON:0003915!1.95e-07!9;UBERON:0004700!1.95e-07!9;UBERON:0001917!1.95e-07!9;UBERON:0003887!6.61e-07!21;UBERON:0000080!7.20e-07!18;UBERON:0002120!7.20e-07!18;UBERON:0004875!7.20e-07!18;UBERON:0005721!7.20e-07!18;UBERON:0005754!7.20e-07!18;UBERON:0007297!7.20e-07!18;UBERON:0000353!7.41e-07!17;UBERON:0006555!7.58e-07!17;UBERON:0005103!7.58e-07!17;UBERON:0000083!7.58e-07!17;UBERON:0009201!7.58e-07!17;UBERON:0004819!7.58e-07!17;UBERON:0006553!7.58e-07!17;UBERON:0003074!7.58e-07!17;UBERON:0003060!7.58e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.92e-13;18!UBERON:0001986;1.92e-13;18!UBERON:0004852;1.92e-13;18!UBERON:0000055;2.94e-12;65!UBERON:0000487;1.51e-11;22!UBERON:0007500;5.74e-11;56!UBERON:0001981;5.74e-11;56!UBERON:0004537;5.74e-11;56!UBERON:0002049;8.74e-11;75!UBERON:0007798;8.74e-11;75!UBERON:0003914;2.27e-10;74!UBERON:0006914;4.40e-10;25!UBERON:0001009;1.19e-09;112!UBERON:0000947;2.41e-09;21!UBERON:0010191;2.41e-09;21!UBERON:0001637;5.59e-09;42!UBERON:0003509;5.59e-09;42!UBERON:0004572;5.59e-09;42!UBERON:0004535;7.29e-09;109!UBERON:0004573;4.38e-08;33!UBERON:0004571;4.38e-08;33!UBERON:0000490;7.32e-08;33!UBERON:0003915;1.22e-07;9!UBERON:0004700;1.22e-07;9!UBERON:0001917;1.22e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,1.79e-29,112;UBERON:0004535,4.79e-29,109;UBERON:0002049,2.87e-28,78;UBERON:0007798,2.87e-28,78;UBERON:0004872,2.20e-24,83;UBERON:0000055,6.27e-24,68;UBERON:0003914,1.02e-21,117;UBERON:0000119,4.30e-20,309;UBERON:0004111,5.74e-20,240;UBERON:0007500,5.84e-20,59;UBERON:0001981,5.84e-20,59;UBERON:0004537,5.84e-20,59;UBERON:0006965,5.84e-20,59;UBERON:0000483,4.12e-19,306;UBERON:0000025,4.97e-17,192;UBERON:0000490,1.12e-13,148;UBERON:0004638,1.94e-13,18;UBERON:0001986,1.94e-13,18;UBERON:0004852,1.94e-13,18;UBERON:0003104,4.09e-13,160;UBERON:0009142,4.09e-13,160;UBERON:0007503,3.41e-12,78;UBERON:0000487,1.59e-11,22;UBERON:0001637,2.82e-11,42;UBERON:0003509,2.82e-11,42;UBERON:0004572,2.82e-11,42;UBERON:0007023,4.10e-11,114;UBERON:0005256,1.41e-10,122;UBERON:0002385,4.34e-10,64;UBERON:0001015,4.34e-10,64;UBERON:0000383,4.34e-10,64;UBERON:0006914,4.42e-10,25;UBERON:0003103,5.33e-10,68;UBERON:0001134,6.11e-10,62;UBERON:0002036,6.11e-10,62;UBERON:0003082,6.11e-10,62;UBERON:0007524,9.07e-10,73;UBERON:0002329,2.13e-09,71;UBERON:0003059,2.13e-09,71;UBERON:0007282,2.13e-09,71;UBERON:0004290,2.13e-09,71;UBERON:0009618,2.13e-09,71;UBERON:0000947,2.31e-09,21;UBERON:0010191,2.31e-09,21;UBERON:0003077,2.40e-09,72;UBERON:0007285,2.40e-09,72;UBERON:0002100,2.59e-09,199;UBERON:0010314,1.64e-08,132;UBERON:0004573,2.06e-08,33;UBERON:0004571,2.06e-08,33;UBERON:0000479,2.75e-08,773;UBERON:0000486,6.73e-08,83;UBERON:0003915,1.24e-07,9;UBERON:0004700,1.24e-07,9;UBERON:0001917,1.24e-07,9;UBERON:0005423,1.65e-07,581;UBERON:0000926,5.34e-07,315;UBERON:0004120,5.34e-07,315;UBERON:0006603,5.34e-07,315;UBERON:0000922,7.83e-07,592;UBERON:0000923,8.96e-07,560;UBERON:0010316,8.96e-07,560;UBERON:0005291,8.96e-07,560;UBERON:0006598,8.96e-07,560;UBERON:0010317,8.96e-07,560;UBERON:0002532,8.96e-07,560;UBERON:0002050,9.15e-07,564 | |||
|phase1_expression=16.3510541343501,2.78330681058278,11.2763523276777,3.00219895059391,5.81049422755474,6.97870819280295,2.53299878168311,0,0,8.10921990454979,8.37361401566913,8.51921351307672,7.12170841216825,6.55961670688247,14.5814845320283,15.4634783683908,12.0538905604795,15.3365118981348,9.75865597581014,4.92484232307152,16.116054608296,3.13454721478088,4.57977579409691,2.6006140763848,3.51519390865448,0,0,0,0.786728553697808,0.767658796194425,0.154816123316076,11.0330546937471,25.9037090149295,12.9413903558376,0,0,1.46800219667424,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,4.84319602106695,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0,0,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0,2.64342657158052,1.12101712596307,3.16060901730092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0.821127996921047,0,0,0,19.5045493051169,12.7433163343691,13.2977064317272,24.2164232097659,7.52006865953834,12.6016471495917,0,3.89307896242109,4.44313640671119,6.20842312895179,7.29028721252946,9.8889202000773,4.00724817121796,2.59549109949101,0,0,0,0,0,0,35.3797085112735,35.2696183993511,62.1381497877594,43.5287115281487,82.2218894971416,70.9804548205374,38.66406880931,49.0991842421725,32.7304961671773,41.8400765955838,31.4206867345135,34.2122447573331,78.5879825305106,55.1494620518803,71.2924914135948,32.7730002802573,63.3172830805799,57.5444665269777,45.994991239765,37.9706263827252,43.4188133115065,0,0,5.23312862571041,21.866765874594,10.7635934914893,29.3948381405346,126.494949750227,31.9201543978521,12.3349072031308,26.6872489324262,11.1000396787722,7.46906484959439,21.5537075311501,18.1442712455939,39.807003470617,27.6564443750399,36.3198219342385,16.8566441488373,6.84566185853339,1.79338416662161,9.15989089421366,4.37056949793955,5.05622904128095,8.9827835352153,16.4597985197769,14.6722609269587,3.56400857184616,9.39614331258516,36.4064544775211,64.6756327634615,5.89176398839232,15.6398149839955,3.60183350129438,25.8996796319694,16.243853177348,18.629519304418,11.3432183160021,39.8244991229274,26.9082309911395,4.23863802319124,6.30191301777245,2.78241828943785,26.0216945446085,15.447699075522,25.6540025006725,11.4975666090214,8.58274832429989,6.25939310767636,12.1234542614109,7.81021103536552,1.91428986632517,16.7864986387383,3.09217365061275,17.4557517178134,5.44928731239107,0.365921118388786,0,0.929551542956147,1.24393266018445,1.26160425437814,0.72995471815166,0,0.643240938192885,4.14404764057442,4.64367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,49.4564154598514,47.6822030931716,29.6333288158608,29.4017422771084,1.26755034821831,0,14.1789577603537,0,0,12.1813145311953,0.439001141634502,1.1240175325762,0.603173834469785,5.92566049014589,25.4130478142053,29.1181739878282,11.5465073620219,1.97081688457631,11.6234607293463,29.4507553432591,31.4830148552095,30.6309185097703,0,0,0,0,0,2.81201501960331,0.16798212819886,1.84307626415102,0,0,1.15014803749563,0,0,0.207328115540772,0,0.25248486685276,0,0,0,5.13217338068116,1.23392991243988,0.600686115687835,0,26.126542652469,20.0541631663309,12.9808765903082,3.23179289394444,118.026627131121,7.607724773004,13.2969058292435,19.7614130131596,20.0621751924471,9.92943924162948,23.9779961114489,14.4407773594729,35.8130259558352,9.05564370458846,3.25736184293735,14.2156779497018,0.791951872933429,0.301439377059586,0,3.19913571782583,0,0,0,15.0963658959697,17.2292903751171,0,0,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,3.72973962092432,12.7599151387905,12.5042630264919,17.6322265404828,83.6042863353845,78.1518970931568,101.875760111922,70.1677075806352,9.93122129101472,20.4666753650386,32.0766521006765,17.2698655619213,15.3026409889614,6.42938747063813,30.3491794067248,20.5886054286514,0.620304078368662,1.07857100409308,0.533637789017222,2.42502057157008,9.98612637062982,13.9099534931653,19.6005168176834,9.05425642399569,8.70046292742528,20.7585421794236,5.62877973973374,12.2248980069142,11.8734453155993,3.70103265126373,5.50441348470694,1.97105174433142,7.2695620085707,6.15915005837784,0,2.20557117333613,0,6.54442354538258,13.6568376005038,13.3746903258613,13.5359883872224,5.77615028283111,45.4922866122576,7.30696123266303,6.86085587803692,59.1413597168662,47.2860500668713,30.8759760026059,107.959076883203,24.3851793789468,27.5929375620169,11.2145560139817,11.6350641250021,16.7906066041634,9.20891481912925,6.79732172664741,3.84675187674584,10.1684540166909,1.62689197332152,11.128429257954,0,0,1.72279661398852,0,38.5641431625983,11.7938276316389,13.2481810718594,11.0522645802813,9.64856007391714,18.6911226070796,16.2418697183936,13.9771668962405,26.2644505157875,2.97512847649761,25.1768988248289,50.9174722853391,2.12431339796655,3.71876439437829,45.0181655967815,8.3644472419272,8.62494024493049,11.1784266366575,13.9189278732012,0.9266210955196,0.715624433709956,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| |||
|short_description=p1@PEAR1 | |||
}} |
Revision as of 21:31, 10 January 2014
Short description: | p1@PEAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PEAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338302, ENST00000444016, ENST00000455314_5end |
EntrezGene: | PEAR1 |
HGNC: | 33631 |
UniProt: | Q5VY43F2Z2F7A6PVP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.31e-19 | 121 |
endothelial cell | 1.51e-18 | 36 |
meso-epithelial cell | 4.53e-18 | 45 |
endothelial cell of vascular tree | 4.75e-17 | 24 |
fibroblast | 3.05e-14 | 76 |
blood vessel endothelial cell | 1.94e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.94e-13 | 18 |
lining cell | 1.29e-10 | 58 |
barrier cell | 1.29e-10 | 58 |
muscle cell | 3.27e-10 | 55 |
muscle precursor cell | 9.83e-09 | 58 |
myoblast | 9.83e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.83e-09 | 58 |
smooth muscle cell | 8.15e-08 | 43 |
smooth muscle myoblast | 8.15e-08 | 43 |
endothelial cell of artery | 1.24e-07 | 9 |
electrically responsive cell | 1.85e-07 | 61 |
electrically active cell | 1.85e-07 | 61 |