FFCP PHASE1:Hg19::chr1:180123993..180124029,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5768 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9756 | |||
|TSSclassifier=strong | |||
|UniProt=A8MXT8 | |||
|association_with_transcript=0bp_to_ENST00000392029_5end | |||
|coexpression_cluster_id=C3910 | |||
|description=CAGE_peak_1_at_QSOX1_5end | |||
|id=chr1:180123993..180124029,+ | |||
|ontology_enrichment_celltype=CL:0000144!6.61e-28!625;CL:0000548!1.18e-25!679;CL:0000004!1.18e-25!679;CL:0000255!1.18e-25!679;CL:0002371!3.70e-25!591;CL:0000012!5.42e-25!682;CL:0000055!3.25e-24!180;CL:0000222!5.90e-18!119;CL:0000057!2.02e-16!75;CL:0000192!1.86e-15!42;CL:0000514!1.86e-15!42;CL:0000183!1.98e-15!59;CL:0000680!1.17e-14!57;CL:0000056!1.17e-14!57;CL:0000355!1.17e-14!57;CL:0000187!1.55e-14!54;CL:0000048!7.68e-14!430;CL:0000723!2.22e-13!436;CL:0000003!1.25e-12!722;CL:0000034!4.09e-12!444;CL:0000393!1.05e-11!60;CL:0000211!1.05e-11!60;CL:0000359!2.03e-11!32;CL:0000220!7.51e-10!246;CL:0000063!8.22e-10!578;CL:0002321!1.68e-09!248;CL:0000499!1.69e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.50e-11;43!CL:0000359;9.41e-11;32!CL:0000134;8.40e-09;55!CL:0000187;5.14e-08;55!CL:0000499;5.40e-08;28!CL:0000723;7.85e-07;61!CL:0000048;8.36e-07;58!CL:0000057;8.52e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.61e-18,121;CL:0000057,6.17e-17,76;CL:0000192,7.32e-16,43;CL:0000514,7.32e-16,43;CL:0000680,4.78e-15,58;CL:0000056,4.78e-15,58;CL:0000355,4.78e-15,58;CL:0000048,5.80e-15,427;CL:0000187,6.27e-15,55;CL:0000723,1.77e-14,433;CL:0000034,3.75e-13,441;CL:0000393,4.54e-12,61;CL:0000211,4.54e-12,61;CL:0000359,2.03e-11,32;CL:0002321,6.93e-10,250;CL:0000499,5.26e-08,28;CL:0002320,5.61e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;1.50e-11;43!CL:0000355;6.97e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!6.30e-17!448;UBERON:0004120!6.30e-17!448;UBERON:0006603!6.30e-17!448;UBERON:0005256!4.91e-15!143;UBERON:0002204!1.87e-14!167;UBERON:0000914!2.63e-14!83;UBERON:0002329!2.63e-14!83;UBERON:0003077!2.63e-14!83;UBERON:0003059!2.63e-14!83;UBERON:0007282!2.63e-14!83;UBERON:0009618!2.63e-14!83;UBERON:0007285!2.63e-14!83;UBERON:0003914!3.21e-14!118;UBERON:0000486!1.07e-13!82;UBERON:0003081!1.57e-13!216;UBERON:0004872!1.66e-13!84;UBERON:0001637!1.21e-12!42;UBERON:0003509!1.21e-12!42;UBERON:0004572!1.21e-12!42;UBERON:0004290!1.81e-12!70;UBERON:0002049!2.89e-12!79;UBERON:0007798!2.89e-12!79;UBERON:0001134!4.93e-12!61;UBERON:0002036!4.93e-12!61;UBERON:0003082!4.93e-12!61;UBERON:0002385!1.45e-11!63;UBERON:0001015!1.45e-11!63;UBERON:0000383!1.45e-11!63;UBERON:0000468!1.91e-11!659;UBERON:0000055!2.90e-11!69;UBERON:0001981!3.44e-11!60;UBERON:0007500!3.44e-11!60;UBERON:0004537!3.44e-11!60;UBERON:0006965!3.44e-11!60;UBERON:0002100!6.59e-11!216;UBERON:0000467!1.13e-10!625;UBERON:0000480!1.26e-10!626;UBERON:0004573!2.82e-10!33;UBERON:0004571!2.82e-10!33;UBERON:0004535!9.88e-10!110;UBERON:0001009!1.41e-09!113;UBERON:0000490!1.64e-09!138;UBERON:0000923!4.89e-07!604;UBERON:0005291!4.89e-07!604;UBERON:0006598!4.89e-07!604;UBERON:0002532!4.89e-07!604;UBERON:0002050!5.11e-07!605;UBERON:0005423!5.11e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.05e-09;42!UBERON:0003509;1.05e-09;42!UBERON:0004572;1.05e-09;42!UBERON:0004573;2.23e-09;33!UBERON:0004571;2.23e-09;33!UBERON:0007500;8.70e-07;56!UBERON:0001981;8.70e-07;56!UBERON:0004537;8.70e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.68e-21,315;UBERON:0004120,2.68e-21,315;UBERON:0006603,2.68e-21,315;UBERON:0002204,9.73e-17,167;UBERON:0007503,1.83e-14,78;UBERON:0000486,4.68e-14,83;UBERON:0003914,6.94e-14,117;UBERON:0003081,4.79e-13,203;UBERON:0004872,4.80e-13,83;UBERON:0002329,7.88e-13,71;UBERON:0003059,7.88e-13,71;UBERON:0007282,7.88e-13,71;UBERON:0004290,7.88e-13,71;UBERON:0009618,7.88e-13,71;UBERON:0007524,1.08e-12,73;UBERON:0001637,1.21e-12,42;UBERON:0003509,1.21e-12,42;UBERON:0004572,1.21e-12,42;UBERON:0001134,2.12e-12,62;UBERON:0002036,2.12e-12,62;UBERON:0003082,2.12e-12,62;UBERON:0003077,2.75e-12,72;UBERON:0007285,2.75e-12,72;UBERON:0005256,4.92e-12,122;UBERON:0002385,6.34e-12,64;UBERON:0001015,6.34e-12,64;UBERON:0000383,6.34e-12,64;UBERON:0002049,8.16e-12,78;UBERON:0007798,8.16e-12,78;UBERON:0003104,2.06e-11,160;UBERON:0009142,2.06e-11,160;UBERON:0000055,8.19e-11,68;UBERON:0007500,1.01e-10,59;UBERON:0001981,1.01e-10,59;UBERON:0004537,1.01e-10,59;UBERON:0006965,1.01e-10,59;UBERON:0000490,1.75e-10,148;UBERON:0004573,2.82e-10,33;UBERON:0004571,2.82e-10,33;UBERON:0002100,1.33e-09,199;UBERON:0004535,2.31e-09,109;UBERON:0001009,3.26e-09,112;UBERON:0005423,1.80e-07,581;UBERON:0002050,2.05e-07,564;UBERON:0000923,3.51e-07,560;UBERON:0010316,3.51e-07,560;UBERON:0005291,3.51e-07,560;UBERON:0006598,3.51e-07,560;UBERON:0010317,3.51e-07,560;UBERON:0002532,3.51e-07,560 | |||
|phase1_expression=111.550524872122,91.8491247492318,303.897695230914,280.205235388765,302.145699832847,198.893183494884,131.715936647521,147.822450381878,82.534658511149,473.775029574909,1213.47623110405,198.344765894196,216.025155169103,334.169152992126,426.1770251861,352.29837674073,379.094858127081,387.794657995695,396.201432617892,139.373037742924,223.584757603701,110.649516681765,31.1997225972852,49.0010441760925,43.6888385789914,33.8511387463424,29.9667151492302,30.9333370562759,97.1609763816793,79.0688560080258,111.622424910891,111.24996816195,205.422436606767,184.507251073227,9.21859686905589,7.81930778680818,45.8016685362362,193.898392986157,209.167858711358,146.699348603916,53.291882869102,42.4300702484863,56.9242004471552,167.498771074059,143.592858601748,148.704029508131,252.650363116479,189.548396378062,235.067135509384,196.781596348351,162.662048645979,159.389022944906,270.280613697509,178.153772669136,195.014140695852,251.868250308005,188.578149689971,168.992060302704,370.973677553534,236.524692955081,285.144358106372,163.276393592424,123.46800406779,128.719874660874,302.398026650985,168.513411733268,214.873675903473,193.963969578206,173.653811833927,149.643114001825,218.549220450646,183.402262721807,209.498100485866,51.7575451464257,37.4183567938477,45.2862674298092,124.123137416877,106.325240131786,123.115799409963,32.2064400427611,24.6656679726872,36.3501665991622,10.5597746676794,8.19207916893197,10.6741110463627,14.9355577898278,10.0098996759003,8.62128659931725,6.61044872784862,8.58648379081828,13.6611112586268,18.79159005987,15.6732023531344,23.7908391442247,61.655941927969,35.8202355294105,22.6216235630908,23.5806457649499,21.793758893948,19.0592604745373,14.340579731878,12.7830907548378,25.3274746930285,22.8391436614606,13.2572658363677,11.7412964129319,20.0394859186112,24.0811681084269,24.4511573412571,29.9276986378691,30.6748519742292,23.4740499445393,17.201241326799,14.7147455449342,17.7710390468461,18.4694228597033,13.0294967824653,15.806862492201,17.2053390573262,10.8312240870193,9.76625180784628,5.70271226669025,17.7678640511772,14.8464468939125,14.9916871862815,18.7054029114773,9.03240796613151,24.7976294166421,21.3952156626806,19.9857677358263,170.664806419773,578.144141064534,501.349104988482,1135.28037763992,653.243297558564,746.249265686164,142.356184522147,996.628214379798,108.620504921514,173.392388815725,147.035431250293,103.604448718691,246.992205462344,92.3253262533229,618.587332305826,634.52876271853,627.029741806968,18.125287447206,7.43593384014166,7.4291500265913,83.0826862792827,136.777300621874,226.682747549759,178.072001706063,467.741871374045,190.381685022527,134.801753416243,117.062791903706,91.0761632477978,127.863274076104,126.085576255163,103.397006377718,134.966317824138,102.577999416497,350.791463432802,140.468472590857,127.083624906412,87.9495662574747,131.85230822066,95.875831616381,102.226573113167,247.747184779799,364.513448299426,247.701421616959,600.83908959964,365.202395640648,717.790169188459,1628.94516923251,351.83103514077,381.260768096769,245.522690178321,509.368487481435,244.923084859616,166.771812022274,176.211931556309,111.09635189138,114.08283304704,168.711430920334,211.020211937297,114.09436430889,246.141976868816,118.139105635627,112.66356928022,99.5796219518942,193.742308520894,148.629523947239,208.408100631519,1312.74315729667,1452.69320951152,392.279546995289,810.601263968717,108.745129614327,109.979178967457,161.528379327279,296.309894094566,427.550475139632,980.153096306638,294.696811849735,465.516104612597,275.702588964771,337.607518547182,785.638489548965,232.177348374203,454.220272100444,259.633014582568,539.409157843087,154.729964195983,388.243144787448,233.070343362302,183.953212659808,819.362139528346,189.413944667964,167.356304610451,146.298465844616,168.557102525136,116.442665727936,35.1284273653235,43.8673533144116,49.3824257195453,41.982727281225,42.8945446488568,40.5124868574171,347.317961772191,333.842046922107,74.5928575303395,352.919625304304,752.920299381378,46.8494928157782,53.9471008249925,52.0583824548321,45.3308227930139,53.1625843585471,53.6231599191078,49.7527527111007,45.1309369788296,56.9425792280658,87.1023436457085,367.433447365028,1131.00538313869,1531.83077263735,3.80265104465493,14.7424082501644,103.979023575927,26.487785964879,31.9769940212095,177.057980228078,106.896777988001,195.579050668258,84.9469816878281,72.1263987784945,281.17256748281,195.507739632561,275.672863268272,96.8018881541891,324.047996090868,107.553003582,104.634725842314,126.709265388242,77.440031000009,64.3864621571154,79.7743099723167,132.914422599087,164.8319589782,122.791322522678,167.646163942462,187.001353262708,82.9311920228375,64.2301004115856,87.0278681705029,43.354364934843,81.004559292168,25.7086863270557,20.6091533386255,23.9860623510122,42.0991039157081,69.1399050260483,33.9930596909136,106.064916534077,56.8636034649379,58.26655322172,40.0157005682809,91.9474891631958,87.192013766656,90.4261064172314,351.231251713882,418.4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| |||
|short_description=p1@QSOX1 | |||
}} |
Revision as of 22:32, 10 January 2014
Short description: | p1@QSOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_QSOX1_5end |
Coexpression cluster: | C3910_Mesenchymal_Smooth_Fibroblast_Hepatic_sacrococcigeal_Prostate_Alveolar |
Association with transcript: | 0bp_to_ENST00000392029_5end |
EntrezGene: | QSOX1 |
HGNC: | 9756 |
UniProt: | A8MXT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.61e-18 | 121 |
fibroblast | 6.17e-17 | 76 |
smooth muscle cell | 7.32e-16 | 43 |
smooth muscle myoblast | 7.32e-16 | 43 |
muscle precursor cell | 4.78e-15 | 58 |
myoblast | 4.78e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.78e-15 | 58 |
multi fate stem cell | 5.80e-15 | 427 |
muscle cell | 6.27e-15 | 55 |
somatic stem cell | 1.77e-14 | 433 |
stem cell | 3.75e-13 | 441 |
electrically responsive cell | 4.54e-12 | 61 |
electrically active cell | 4.54e-12 | 61 |
vascular associated smooth muscle cell | 2.03e-11 | 32 |
embryonic cell | 6.93e-10 | 250 |
stromal cell | 5.26e-08 | 28 |
connective tissue cell | 5.61e-07 | 361 |