FFCP PHASE1:Hg19::chr1:183605030..183605043,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10092 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=708 | |||
|TSSclassifier=strong | |||
|UniProt=O15511 | |||
|association_with_transcript=-45bp_to_NM_005717,uc001gql.2_5end | |||
|description=CAGE_peak_4_at_ARPC5_5end | |||
|id=chr1:183605030..183605043,- | |||
|ontology_enrichment_celltype=CL:0000066!2.35e-09!254;CL:0002319!1.17e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.54e-08;25!CL:0002321;7.18e-07;15!CL:0000039;7.97e-07;7!CL:0000586;7.97e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.40e-09,253;CL:0002319,4.88e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.69e-07;29 | |||
|ontology_enrichment_disease=DOID:162!6.64e-20!235;DOID:14566!1.62e-18!239;DOID:0050687!6.93e-18!143;DOID:305!2.29e-17!106;DOID:3095!2.71e-12!22;DOID:2994!2.71e-12!22;DOID:0050686!5.99e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.29e-13;22!DOID:2994;2.29e-13;22!DOID:171;7.90e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.42e-20,235;DOID:0050687,1.27e-19,143;DOID:14566,1.09e-18,239;DOID:305,4.82e-18,106;DOID:3095,4.24e-13,22;DOID:2994,4.24e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.72e-08!94;UBERON:0001016!5.72e-08!94;UBERON:0001007!1.77e-07!155;UBERON:0001555!1.77e-07!155;UBERON:0007026!1.77e-07!155;UBERON:0001737!7.88e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.53e-07;9!UBERON:0001557;1.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.71e-10,223;UBERON:0001737,2.09e-07,9 | |||
|phase1_expression=0.726713517082227,1.2846031433459,1.26858963686374,0,0.446961094427288,1.74467704820074,0,0,0.261185628199839,1.96587149201207,1.39560233594486,1.31064823278103,0.527533956456907,0.74259811776028,0.331397375727916,0,0,0,0,3.81675280038043,3.06001036866379,1.88072832886853,3.43483184557268,3.96935832711364,2.38531015230125,0.993374274723366,0.410502947249729,0.629686250509434,0.393364276848904,0.383829398097213,0.309632246632152,0,0.90361775633475,1.47901604066715,0.619737604642413,0.568676929949686,1.17440175733939,0,1.20326668482085,0,0,0.32389366601898,0.515151135268373,0.436194716338694,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0,0.768482119587302,0.236482229888585,0.344745680736619,0,1.35426486594342,0.376484679085209,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,0.659702600373432,0.598390972864896,0,0.290209238628584,0.56738522469114,1.86846674698672,1.25624332628372,1.0429658368404,0.434377689410233,0.605399502633369,1.10483290796269,0.316462387440884,0,0.425208599930087,0.209658645508376,0,0,0.48217676009124,0.285012743741249,0.79566670879636,0.730656615058536,0,1.63841583378639,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,0,0,1.1384259382189,1.17447437874188,0.382273228125229,1.32171328579026,0.560508562981536,1.05353633910031,0,0,0.205601498999509,0.334372990781356,0.977766799900771,0.473447805734733,1.94826728407911,0.779873198196215,1.17842362989935,0.664601683750863,1.62482318259009,0.896639238079726,0.650296737799391,0.493313713811028,0.552700035571697,1.15921234294021,0.593146252648242,1.07016331235885,1.04535523804977,0.453237370790265,0,0,0,0.637130828648193,0,0.950452044448374,0,0.511946444617674,0,0.236777252044017,1.64225599384209,0.403213486449465,0,0.144824403882799,0,0,0.767175371061182,0.361439152384566,0.50133791063589,0.724232594804119,0.795285947051099,0.486634870302636,3.49778823507051,2.21729397462564,1.84453049955565,1.57174890597255,0.364295288292542,2.59549109949101,0,0,0.26591592103773,0.476981248610684,0,0,0.79504962946682,1.72046919021225,0.347140501607594,2.26123176769604,1.67799774483962,1.10047216776027,0.417989933073621,0.516833518338658,0.35576626268671,0,0.402829317109147,0.760272105718513,1.22031028774085,1.10298924103761,0,1.16089646769304,0.898117490504679,2.0270066486998,0,0.949265659568129,1.28241220751285,0,3.87780264148325,0.872188104285069,0.496971951695318,1.51956613997496,0.794455084879313,0.286836620748814,2.12801029319014,1.68203280042692,0,0.74000264525148,0.311211035399766,0.808264032418128,1.47115712802113,2.57307626996383,1.15235184896,1.40592859100278,1.24864030732128,1.71141546463335,0.149448680551801,2.23125547423153,3.88495066483516,2.38766371393822,1.02077085627447,1.22834317311768,1.44656093646072,1.18800285728205,0.494533858557114,0.910161361938026,1.43723628363248,1.5150250255866,3.00284447692714,1.38532057742091,2.63386572528503,2.14541457059314,1.50238058906597,1.36118619792025,1.97328599257748,0.85422955527427,0.423863802319124,1.20036438433761,0.92747276314595,0.772921620136887,1.11670113798954,0.168776332241266,0.974370051611986,0.757301322732344,0.460249493211497,0.323292113637624,0,1.20902517873168,1.52604533079439,0.773043412653187,0.818238361772504,1.14721838155602,10.0018439026268,12.9879172955056,10.4574548582567,7.3599349060913,8.07426722802011,14.5990943630332,0,0,0,1.85747171212792,2.16563844500876,6.15195360207188,8.42923450390509,5.78426471720357,5.84558055481688,7.62578054323422,7.35538919244399,5.39325232640658,7.6526371398885,8.46443745282059,0.738155454624648,1.40241773803446,0.8231480226628,0,3.80265104465493,2.94848165003288,1.77236972004421,4.41463099414651,4.42758378755209,3.08822058537346,0.439001141634502,0,1.50793458617446,2.22212268380471,0.977424915930974,0,0,2.89826012437692,0.70445216541493,0.144366447761074,1.38895653772983,0.761016608938393,0.790204397959275,5.15091697256924,0.738651018262192,0.234004265139238,0.445893486866185,1.87467667973554,1.17587489739202,1.41775097242386,0.716468181622786,0.871901815541886,1.91691339582606,0,0.352193736052904,0.207328115540772,0.576479813667846,0.12624243342638,0.380987365753014,0,1.17217447210047,0,0.616964956219941,0.901029173531752,0.571652865261156,2.01835951821649,1.30788020649984,1.54010400223995,0.387815147273333,3.57656445851882,1.690605505112,0.26593811658487,3.12022310734098,2.05765899409714,4.25547396069835,0.266422179016099,0.714889968290738,0,4.11620168390384,1.30294473717494,1.06617584622764,1.58390374586686,0.301439377059586,0.871533458600294,0.199945982364114,1.2162378064119,0.502257091432126,2.10833939483032,1.19812427745791,2.29723871668228,4.27910715122155,1.30303176000821,0.410952645100767,0.537182889719687,1.34502172792233,0.591092280605782,0.431255149719035,0.256686072559497,2.54094624222463,6.50699269288109,6.18631050222156,3.85287410269002,3.82763250991898,0.749007023947182,0,0,0.858840442033979,1.00034104211935,1.08506009479894,1.03985430765404,1.78428988797162,0.788512075169673,0.585707074963566,1.20378439891088,0,2.0694614258501,2.65690239414175,1.10621501125022,0.781952530212746,0.195801157462741,0.343143423810856,0.620304078368662,0.431428401637234,0.426910231213777,0.606255142892519,0,0.907170879989041,0.992431231275107,0.306923946576125,1.40330047216537,1.92208723883551,0.511707249066704,1.93024705372329,1.48418066444991,0.771048469013278,0.887808626565635,1.06765302817952,0,1.51073491997947,2.65890789101569,0.802025881213139,2.4861867012692,2.06666006696292,1.82091168006717,0.917870904715969,4.06079651616671,1.00119938235739,2.35304930753057,2.92278449306521,1.16106791782163,1.13733384070897,1.19065593693561,1.94324324491925,0,1.35473218771926,0.501689773854853,4.33289664176565,1.66215201785745,2.23874754722178,4.38519753291869,5.22870902049801,4.10320200186223,2.62411716559765,3.90454073597164,1.03041011647722,0.732555718546747,0.990113999047056,2.29706215198469,0.650060246036521,1.6068392984416,0.870036464629098,2.15668063960502,1.5350367472613,3.85942402956686,1.82614416276065,3.19036726611303,1.27839941124151,0.356128142586949,1.15699440752685,0.576570202095319,0.638063562472921,2.2254711788221,1.85938219718914,0.31481234683064,0,0,0,0.869932992075073,0.9266210955196,1.00187420719394,1.48863347743867,1.89827654831236,0.762520775695299,1.27948895655667,0.42793898803392,0.636406495851874,0.78494864019923,0.719489830333259,2.19629623788844,1.64937363283961,0.404364963146632,0,0.842516912477962,0.48763373908959,0.974853958525138,0,1.09199929126389,0.565621727814851,0,0.551365343546124,0,0,0,2.62357900818653,0.608731130888112,1.239293992399,1.69017361519345,2.43799298746888,1.17898849215745,0.7133421029625,1.41904425628239,0,0.329294892959902,0.379473173765715,0.699869440489966,2.11688647996127,1.34060455107157,1.08890984861323,0.847294206991012,0.86101074534246,0,0.886860307073351,0.229723400206959,0.507447609232169,0,1.13929437434833,1.19115887728894,1.23408681925858,0,0.540031437238115,0,1.06824071127473,4.81239927631679,8.33136734335508,2.9728508020115,1.00988449083511,2.48996451719449,1.75368900001705,3.19326994292507,0.5745161103971,0,0.973865820823666,1.12318871245384,2.9670508274315,0.47003968731907,0,0.846458889008016,0.802940375518498,1.00899853595524,2.12923118845163,1.03051603426729,0.921722292925374,0.671028323677248,0.500547425135725,3.51698571723673,3.61928026063815,4.92349595790849,1.89318974933188,1.33228787199128,7.04935025439248,2.43282702530686,2.05111450980652,7.16027078322129,1.44876399560722,0.852408440419239,0.95497793895076,1.18785872333055,1.84296421259539,0,1.40669416410513,0.556543525114529,1.97764649072111,1.05562704063997,1.19548792950642,0.828851746593443,5.03865495708552,1.53403023753232,1.96935688737711,0.311039587661807,0.898683511473268,1.79021174675609,0.511572370226872,1.38100767891707,0,2.22273980289274,0,2.31920245404628,0,4.16684417736373,4.63537999979837,2.17499872630438,2.16207551742449,2.79679015322043,3.78220290828698,9.30807107751954,3.49925536059905,2.43074992906609,0.885741385813839,0.964771509003264,0,0.995213339381022,2.06883333267483,2.85201016300164,1.41620002574687,0.697118721393016,1.46205491157214,0.683652335082007,11.0670674106269,9.69382559625539,11.1906793079668,0.957003479195758,1.37396390102793,3.19820865611181,4.08773192782946,2.82564461511045,0.831058409500782,1.80476528493745,2.74487548044835,3.18861015254101,1.70778359451767,1.11255605286265,2.10998064528027,1.63232808159148,4.09923907158428,4.32777279484182,1.99052386215701,1.06149077404007,4.27721101453538,0.593042257361244,0.123563938946503,0.208843899010911,1.81983059047828,1.60515529459758,2.57690890297873,4.37891494117598,2.73930466504926,1.69946265673865,0.394584402849391,1.20990716048664,4.89716418608784,1.64285107034069,0.60129367765797,3.31802212471191,3.98792323624311,0.992975867626496,1.2557316736289,1.19472429772959,1.99226682220855,0.832048038078832,3.29763502836749,4.70363507589013,2.61177619741208,1.39781334593624,1.20390222730132,3.19295893253981,2.33885814675794,2.87404099686232,1.64881328030313,0.0882561266915003,2.25980740780532,0.274083849293502,1.19228767021794,1.26621591911757,1.95551382734803,2.08412932653988,1.06726497369676,0.999048047910651,1.44090417154106,1.60351234632282,4.97625493799697,2.88109595976299,1.36677789121976,1.17847017308398,1.63085047288337,3.03348254305766,2.14196257036276,0.866851769704557,1.20084057741958,2.46429682005587,1.27746588066972,3.0083580899397,1.8402114799552,0.279282401272254,0.916641696046735,0,1.79711100449092,0,0.669514372325618,2.08268764708851,0.360299883542404,24.4641494007653,1.57566364614447,1.56590130924216,1.68508859635462,1.77169466726548,4.06431993915765,0.795229689809303,0.817220436669454,16.718327440362,9.3526816886119,12.0477698028464,0.899895566206002,0.77380195455795,0.789744236554321,1.0063040627978,0.630445658393585,1.99327434912993,0.422401346077626,1.97216073266129,6.52511670886114,0.714695326373367,0.662091970365432,2.28841683889275,1.08599920350743,0,0.653174720218818,0,1.31348033198942,0.340776043570843,0.453248366080503,1.02586563574658,2.65013777824443,2.19781025814636,1.19009341568421,1.02652102730598,2.11444506695002,1.49502377594773,3.14408610199332,1.24271716604159,0,0.790446527591777,0.487170393523584,1.27668251554036,0.544017803369474,0.5013797880454,1.22538230705385,0.655745261419609,6.59627204250984,0.886068179966986,1.09823638411767,1.001527445652,2.86704597845036,1.44207766997908,1.30402446176905,8.30091809617385,4.12435346274952,0.454947352624943,0,0.705797459094515,2.81000943484129,3.4781046866598,1.49254802886874,1.63599316893057,0.554805861502613,0.568209015825267,2.26411111577318,0,0.915360273587694,0.453692771289717,0.932623203496683,0.443565449968902,0.318593534327405,0.899606224327209,0.931577741257556,0.829412415681711,0.53168342911599,1.5652351854352,0.450772826991655,0.380805212168795,2.44122439922797,0.363697318405119,0.966695013382396,0.464033759878494,0.398095888698616,0.800055529326307,1.03018711554838,0.673498977531838,3.78554694685953,1.92619830407303,0.428883182749851,1.82696004375648,1.81364740409818,2.08370226891451,0.734210113519403,1.79088841081487,2.16161013012681,1.09642024789354,0.176689145945881,0.192914038270915,0.337884881306145,3.33113974164331,7.59946751808637,0.607719912354764,0.967809053062115,0.389720617678777,0.797189041880179,0.490696182767533,0,2.21195617878347,1.69049698686902,0.59996218756479,3.20075189082423,0,1.70254786070051,0.184105950251841,3.35710818526667,1.24415452006595,3.06946491128764,9.27293378011463,4.87524419753279,5.78811082417674,2.88545300921843,8.07784696386395,2.10690799240304,9.49696360554514,1.90802610392051,2.44471409503885,10.4074197277111,0,0.6124909547064,0.899209151350433,2.8339315265117,1.27707087245721,1.23069818544453,2.01657356977374,1.03735878696327,3.55246420390072,2.85538840518309,2.55184068102667,6.37036506077798,3.66857197043358,0.693153996902029,1.90691047733584,0,2.78482710962785,0.977734268540344,1.21023041222112,1.56302802246618,3.66669372273991,1.47394725759087,1.18284868973636,0.742913430802341,0.781078098613847,0.826747186004736,0.824405532520789,4.37579847214576,0,1.98484471355718,8.79356221798103,1.40538670403555,2.14280734351315,0,0,1.82129753081038,0.709618961301111,1.61327582578091,1.54339208493677,1.22345519358297,1.05236437700559,1.53651993149159,0.444925607568277,1.25588948560822,0.471346769748006,2.5224494698241,0.913158720509496,0.863710364874486,0.47775168788705,1.07214816264985,5.3724627989127,1.62737995515375,1.73858272302579,0.801711364730253,0.828864656652147,1.0243108625637,0.691259661814092,0.860454717640555,0.828324005113957,0.170426809518315,0,4.81124423942505,1.86123831398592,1.91107787795487,0.223710863595585,1.47225350422864,0.609589624911347,0.647428837187895,0.513314034281235,2.3196288626764,0.971421986118279,2.33939463462106,4.77481860387284,7.13520544665411,5.42141193787008,18.1401852629958,1.35866559210006,1.00326405540328,1.31135736302374,1.41095188908457,0.735444965261716,2.35676547101626,3.33724394095407,2.67341760294377,0.8453114551668,1.35941691750254,0.939839179798536,1.28915775947154,1.59905849479886,1.42843150884526,0.352894871715692,1.20362050033752,1.46067277649303,0,1.14671666521161,3.15543124386369,1.22384682343646,3.9271562130634,2.1161073620616,0.371995018166751,0.924351257262837,1.73050624849516,7.94848476460997,8.95977690102303,5.8281310465261,12.0346819095538,9.08539177902906,11.854442039995,12.2846694253264,2.04602485189246,3.48353369203032,1.65833887891756,2.0686599172379,1.70587185520785,1.66645102024618,2.84191203278427,2.42091385753846,2.80329656451534,0.891060215894309,1.0105859447911,1.08858373948481,0.684466602170562,1.14498490124799,0.645499848534087,0.99798106963804,1.22104902916462,1.28072815053259,5.7921684686082,0.449126010532934,2.34640942403454,1.1001729976458,1.22068853494722,1.99727032255654,0.805095174364105,1.60284246151616 | |||
|short_description=p4@ARPC5 | |||
}} |
Revision as of 22:44, 10 January 2014
Short description: | p4@ARPC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARPC5_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_NM_005717, uc001gql.2_5end |
EntrezGene: | ARPC5 |
HGNC: | 708 |
UniProt: | O15511 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.40e-09 | 253 |
neural cell | 4.88e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.71e-10 | 223 |
larynx | 2.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.42e-20 | 235 |
cell type cancer | 1.27e-19 | 143 |
disease of cellular proliferation | 1.09e-18 | 239 |
carcinoma | 4.82e-18 | 106 |
germ cell and embryonal cancer | 4.24e-13 | 22 |
germ cell cancer | 4.24e-13 | 22 |