FFCP PHASE1:Hg19::chr1:221052669..221052678,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4978 | |||
|TSSclassifier=strong | |||
|UniProt=Q14774 | |||
|association_with_transcript=-64bp_to_NM_021958,uc001hmv.3_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_12_at_HLX_5end | |||
|id=chr1:221052669..221052678,+ | |||
|ontology_enrichment_celltype=CL:0002009!4.12e-21!65;CL:0002194!5.04e-21!63;CL:0000576!5.04e-21!63;CL:0000040!5.04e-21!63;CL:0000559!5.04e-21!63;CL:0000766!3.75e-20!76;CL:0000557!6.44e-20!71;CL:0000839!3.21e-19!70;CL:0000763!2.28e-15!112;CL:0000049!2.28e-15!112;CL:0000860!3.22e-14!45;CL:0002057!5.71e-14!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.47e-44;33!CL:0002057;5.47e-44;33!CL:0000473;1.31e-35;39!CL:0000234;1.31e-35;39!CL:0000576;1.15e-29;48!CL:0000766;1.36e-16;69!CL:0000990;2.71e-09;8!CL:0000763;2.97e-09;100!CL:0000738;1.29e-08;136!CL:0000451;1.50e-07;10!CL:0002087;7.68e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,3.13e-45,61;CL:0002194,1.08e-43,59;CL:0000576,1.08e-43,59;CL:0000040,1.08e-43,59;CL:0000559,1.08e-43,59;CL:0000557,1.53e-40,67;CL:0000766,3.84e-40,72;CL:0000839,2.52e-38,66;CL:0000473,3.88e-38,48;CL:0000234,3.88e-38,48;CL:0000860,5.40e-37,42;CL:0002057,5.40e-37,42;CL:0000763,6.53e-34,108;CL:0000049,6.53e-34,108;CL:0000738,1.29e-23,136;CL:0002032,2.74e-21,161;CL:0000837,2.74e-21,161;CL:0002031,5.97e-21,120;CL:0002087,1.55e-20,115;CL:0000037,4.97e-20,168;CL:0000988,1.47e-18,177;CL:0000990,2.27e-09,8;CL:0000048,2.05e-08,427;CL:0000723,3.76e-08,433;CL:0000034,8.24e-08,441;CL:0000451,1.31e-07,10;CL:0000134,2.80e-07,354;CL:0002320,5.79e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.32e-27;42!CL:0000049;1.10e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.02e-19!112;UBERON:0002371!1.84e-16!80;UBERON:0002390!2.48e-16!102;UBERON:0003061!2.48e-16!102;UBERON:0002405!2.86e-16!115;UBERON:0001474!4.20e-15!86;UBERON:0003081!2.77e-13!216;UBERON:0002204!1.64e-12!167;UBERON:0004765!9.24e-12!101;UBERON:0001434!9.24e-12!101;UBERON:0000926!2.62e-09!448;UBERON:0004120!2.62e-09!448;UBERON:0006603!2.62e-09!448;UBERON:0000467!2.43e-07!625;UBERON:0000480!3.09e-07!626;UBERON:0000468!5.41e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.88e-37,76;UBERON:0002405,5.81e-36,93;UBERON:0001474,3.68e-34,82;UBERON:0002193,7.41e-32,108;UBERON:0004765,1.89e-30,90;UBERON:0002390,2.25e-29,98;UBERON:0003061,2.25e-29,98;UBERON:0001434,1.22e-26,100;UBERON:0002204,6.75e-19,167;UBERON:0003081,3.61e-16,203;UBERON:0000926,2.35e-09,315;UBERON:0004120,2.35e-09,315;UBERON:0006603,2.35e-09,315 | |||
|phase1_expression=0.54503513781167,0,0.704772020479856,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,1.11957737119962,0.647787332037959,2.31818010870768,0.290796477559129,0,0.485168122375632,2.32429036905685,1.23350366406548,2.47765096716083,8.63077176966451,5.37937483711111,4.02019790810595,1.72372840368309,0,0,0.564727018627814,1.91034305040492,1.34834090667051,1.22433556948361,2.56743221660875,0.639337125799041,2.63881040149373,7.38015533200038,5.96714650745772,1.7412554317715,1.70215567407342,1.24564449799115,9.04495194924276,6.77927793946262,4.77815458351257,3.63239701580021,1.84138817993782,0.632924774881769,0.211255286311942,0,0,0.336985893439485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0.324547393654683,1.91542711029194,1.32957960518865,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,0,0.419499436209906,0,0.417989933073621,0.516833518338658,1.06729878806013,0.33472061276467,0,0,0,0.367663080345869,0,0.357198913136319,0,0.563057402416611,0,1.89853131913626,0.366403487860815,0,0,0,0.496971951695318,0.379891534993739,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0.468642863667593,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0.206651562351531,0,0,0.910161361938026,1.43723628363248,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.309157587715317,0,0,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,2.31492756288305,0,0,0,0.738651018262192,1.63802985597466,0.594524649154913,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,2.00902836572851,0,0,0,2.85273810081437,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,4.14415513436035,0.24538298343828,0,0.271265023699736,0.207970861530807,0.535286966391485,0.157702415033935,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,1.6068392984416,0.290012154876366,0,0.15350367472613,0.551346289938122,0.107420244868274,0.725083469571143,0.255679882248303,0.178064071293475,0,0,0,0,0,0,0.6970372701606,0,0,1.73986598415015,0,0.286249773483982,0,0,0,1.02359116524534,0.42793898803392,0.318203247925937,0.78494864019923,0.179872457583315,0,0.471249609382746,0.404364963146632,0,0,1.46290121726877,0.487426979262569,0,0.136499911407986,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0.196498082026242,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.753150406214233,0,0,0,0,0.507447609232169,0,0,1.42939065274673,0.822724546172388,0.648473311192717,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0.324621940274555,0,0.684704037099577,0,0,0.846458889008016,0.481764225311099,1.00899853595524,0,0,0.921722292925374,0.894704431569664,1.00109485027145,0.19538809540204,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.140669416410513,0,1.48323486804084,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.394573622547734,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.366390373607449,0,0,1.2558420511602,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.176915129006678,1.22206028986725,0.593042257361244,0.123563938946503,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0.60129367765797,0.207376382794494,0,0.330991955875499,0,0,0,0.693373365065693,0,0,0.0870592065804026,0,0.51595809741485,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0.451961481561065,0,0,0,0,0.0801588202515337,0.426905989478705,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,1.43574604915363,0.399358000997982,0.429226048136571,0.446342914883745,0.268733889946905,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0,0.293104467356165,1.32506888912221,0.258565912723101,0.26446520348538,0.513260513652988,0,0.533937062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| |||
|short_description=p12@HLX | |||
}} |
Revision as of 00:17, 11 January 2014
Short description: | p12@HLX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HLX_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -64bp_to_NM_021958, uc001hmv.3_5end |
EntrezGene: | HLX |
HGNC: | 4978 |
UniProt: | Q14774 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 3.13e-45 | 61 |
monopoietic cell | 1.08e-43 | 59 |
monocyte | 1.08e-43 | 59 |
monoblast | 1.08e-43 | 59 |
promonocyte | 1.08e-43 | 59 |
granulocyte monocyte progenitor cell | 1.53e-40 | 67 |
myeloid leukocyte | 3.84e-40 | 72 |
myeloid lineage restricted progenitor cell | 2.52e-38 | 66 |
defensive cell | 3.88e-38 | 48 |
phagocyte | 3.88e-38 | 48 |
classical monocyte | 5.40e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.40e-37 | 42 |
myeloid cell | 6.53e-34 | 108 |
common myeloid progenitor | 6.53e-34 | 108 |
leukocyte | 1.29e-23 | 136 |
hematopoietic oligopotent progenitor cell | 2.74e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.74e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 5.97e-21 | 120 |
nongranular leukocyte | 1.55e-20 | 115 |
hematopoietic stem cell | 4.97e-20 | 168 |
hematopoietic cell | 1.47e-18 | 177 |
conventional dendritic cell | 2.27e-09 | 8 |
multi fate stem cell | 2.05e-08 | 427 |
somatic stem cell | 3.76e-08 | 433 |
stem cell | 8.24e-08 | 441 |
dendritic cell | 1.31e-07 | 10 |
mesenchymal cell | 2.80e-07 | 354 |
connective tissue cell | 5.79e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.88e-37 | 76 |
immune system | 5.81e-36 | 93 |
bone element | 3.68e-34 | 82 |
hemolymphoid system | 7.41e-32 | 108 |
skeletal element | 1.89e-30 | 90 |
hematopoietic system | 2.25e-29 | 98 |
blood island | 2.25e-29 | 98 |
skeletal system | 1.22e-26 | 100 |
musculoskeletal system | 6.75e-19 | 167 |
lateral plate mesoderm | 3.61e-16 | 203 |
mesoderm | 2.35e-09 | 315 |
mesoderm-derived structure | 2.35e-09 | 315 |
presumptive mesoderm | 2.35e-09 | 315 |