FFCP PHASE1:Hg19::chr1:222818207..222818217,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C767 | |||
|description=CAGE_peak_at_chr1:222818207..222818217,+ | |||
|id=chr1:222818207..222818217,+ | |||
|ontology_enrichment_celltype=CL:0000624!1.81e-18!6;CL:0000738!6.93e-16!140;CL:0000791!1.03e-14!18;CL:0000789!1.03e-14!18;CL:0002420!1.03e-14!18;CL:0002419!1.03e-14!18;CL:0000790!1.03e-14!18;CL:0000623!2.12e-14!3;CL:0000825!2.12e-14!3;CL:0000838!2.22e-13!52;CL:0000542!4.56e-13!53;CL:0000051!4.56e-13!53;CL:0000037!6.91e-13!172;CL:0000566!6.91e-13!172;CL:0002031!9.32e-13!124;CL:0000084!1.01e-12!25;CL:0000827!1.01e-12!25;CL:0002087!3.85e-12!119;CL:0000988!7.91e-12!182;CL:0002032!2.44e-11!165;CL:0000837!2.44e-11!165;CL:0002274!2.26e-08!5;CL:0000457!2.26e-08!5;CL:0002191!2.26e-08!5;CL:0000097!2.26e-08!5;CL:0000831!2.26e-08!5;CL:0002028!2.26e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.17e-30;3!CL:0000791;4.50e-20;18!CL:0000789;4.50e-20;18!CL:0002419;4.50e-20;18!CL:0000624;9.04e-16;6!CL:0000084;1.38e-14;25!CL:0000625;5.00e-09;11!CL:0000767;1.21e-08;3!CL:0000542;6.73e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.59e-30,3;CL:0000825,3.59e-30,3;CL:0000791,4.73e-20,18;CL:0000789,4.73e-20,18;CL:0002420,4.73e-20,18;CL:0002419,4.73e-20,18;CL:0000790,4.73e-20,18;CL:0000624,7.79e-16,6;CL:0000838,2.69e-15,52;CL:0000542,5.21e-15,53;CL:0000051,5.21e-15,53;CL:0000084,1.43e-14,25;CL:0000827,1.43e-14,25;CL:0000738,4.28e-10,136;CL:0000625,5.64e-09,11;CL:0002031,8.49e-09,120;CL:0000767,1.12e-08,3;CL:0002032,1.72e-08,161;CL:0000837,1.72e-08,161;CL:0000037,3.99e-08,168;CL:0000988,1.07e-07,177;CL:0002087,7.83e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;4.50e-20;18!CL:0000051;6.73e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53531759238885,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,4.52432471261816,1.57204305099666,0.822405995998037,0.167186495390678,0,0,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0,0.535081656179426,0,0,0.383220493601921,0,0.506039384039006,0,0,0,0,0,0,0,0,2.01606743224732,0.802320587350522,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,1.29707958075265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,0.862510299438069,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:222818207..222818217,+ | |||
}} |
Revision as of 00:20, 11 January 2014
Short description: | p@chr1:222818207..222818217, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:222818207..222818217, + |
Coexpression cluster: | C767_CD4_CD8_Neutrophils_Natural_Mast_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.59e-30 | 3 |
pro-NK cell | 3.59e-30 | 3 |
mature alpha-beta T cell | 4.73e-20 | 18 |
alpha-beta T cell | 4.73e-20 | 18 |
immature T cell | 4.73e-20 | 18 |
mature T cell | 4.73e-20 | 18 |
immature alpha-beta T cell | 4.73e-20 | 18 |
CD4-positive, alpha-beta T cell | 7.79e-16 | 6 |
lymphoid lineage restricted progenitor cell | 2.69e-15 | 52 |
lymphocyte | 5.21e-15 | 53 |
common lymphoid progenitor | 5.21e-15 | 53 |
T cell | 1.43e-14 | 25 |
pro-T cell | 1.43e-14 | 25 |
leukocyte | 4.28e-10 | 136 |
CD8-positive, alpha-beta T cell | 5.64e-09 | 11 |
hematopoietic lineage restricted progenitor cell | 8.49e-09 | 120 |
basophil | 1.12e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.72e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-08 | 161 |
hematopoietic stem cell | 3.99e-08 | 168 |
hematopoietic cell | 1.07e-07 | 177 |
nongranular leukocyte | 7.83e-07 | 115 |