FFCP PHASE1:Hg19::chr1:230846397..230846417,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=183 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=333 | |||
|TSSclassifier=not | |||
|UniProt=Q86U78 | |||
|association_with_transcript=178bp_to_AB529142,BT006851,DQ891016,DQ894196_5end | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_2_at_AGT_5end | |||
|id=chr1:230846397..230846417,- | |||
|ontology_enrichment_celltype=CL:0000181!1.87e-12!12;CL:0000417!1.87e-12!12;CL:0000668!1.87e-12!12;CL:0000414!1.87e-12!12;CL:0000412!1.87e-12!12;CL:0000182!1.87e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.29e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.30e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.94e-18;3!UBERON:0006222;1.84e-14;1!UBERON:0010227;1.84e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.19e-44!115;UBERON:0001049!9.78e-38!57;UBERON:0005068!9.78e-38!57;UBERON:0006241!9.78e-38!57;UBERON:0007135!9.78e-38!57;UBERON:0002616!4.45e-29!59;UBERON:0003075!1.08e-28!86;UBERON:0007284!1.08e-28!86;UBERON:0001017!3.23e-28!82;UBERON:0002346!5.90e-27!90;UBERON:0005743!1.87e-26!86;UBERON:0000955!4.49e-25!69;UBERON:0006238!4.49e-25!69;UBERON:0003076!7.09e-24!15;UBERON:0003057!7.09e-24!15;UBERON:0000073!4.94e-23!94;UBERON:0001016!4.94e-23!94;UBERON:0002780!4.01e-19!41;UBERON:0001890!4.01e-19!41;UBERON:0006240!4.01e-19!41;UBERON:0000025!1.33e-18!194;UBERON:0003080!1.53e-18!42;UBERON:0004733!1.08e-17!12;UBERON:0002028!1.08e-17!12;UBERON:0007277!1.08e-17!12;UBERON:0001893!5.65e-17!34;UBERON:0002020!6.50e-17!34;UBERON:0003528!6.50e-17!34;UBERON:0004732!3.69e-16!13;UBERON:0001869!3.69e-16!32;UBERON:0004111!1.05e-15!241;UBERON:0002791!1.37e-15!33;UBERON:0000483!8.72e-15!309;UBERON:0000119!1.71e-14!312;UBERON:0002619!2.74e-14!22;UBERON:0000477!1.57e-12!286;UBERON:0000033!2.02e-12!123;UBERON:0000956!2.83e-12!25;UBERON:0000203!2.83e-12!25;UBERON:0002680!6.36e-12!9;UBERON:0001895!6.36e-12!9;UBERON:0010092!6.36e-12!9;UBERON:0000481!6.57e-12!347;UBERON:0002107!1.02e-11!19;UBERON:0006925!1.02e-11!19;UBERON:0008836!1.02e-11!19;UBERON:0000153!1.87e-11!129;UBERON:0007811!1.87e-11!129;UBERON:0003056!3.79e-11!61;UBERON:0004121!4.32e-11!169;UBERON:0001950!4.58e-11!20;UBERON:0000924!1.30e-10!173;UBERON:0006601!1.30e-10!173;UBERON:0009497!3.43e-10!25;UBERON:0000015!3.43e-10!25;UBERON:0002423!3.43e-10!25;UBERON:0006235!3.43e-10!25;UBERON:0004161!3.43e-10!25;UBERON:0008835!8.37e-10!22;UBERON:0003894!8.37e-10!22;UBERON:0002298!1.04e-09!8;UBERON:0009854!2.81e-09!23;UBERON:0000200!4.17e-09!6;UBERON:0000062!6.29e-09!511;UBERON:0000475!7.31e-09!365;UBERON:0004151!1.34e-08!3;UBERON:0007499!2.35e-08!25;UBERON:0002240!4.66e-08!3;UBERON:0005057!6.01e-08!26;UBERON:0009856!6.01e-08!26;UBERON:0002368!1.03e-07!35;UBERON:0001896!1.04e-07!3;UBERON:0005290!1.04e-07!3;UBERON:0010096!1.04e-07!3;UBERON:0002365!1.36e-07!31;UBERON:0002330!1.36e-07!31;UBERON:0002771!1.66e-07!3;UBERON:0000988!3.83e-07!3;UBERON:0001871!6.48e-07!7;UBERON:0002037!8.93e-07!6;UBERON:0006215!8.93e-07!6;UBERON:0003929!9.35e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.99e-18;19!UBERON:0006925;7.99e-18;19!UBERON:0002079;1.84e-14;1!UBERON:0002423;1.51e-13;25!UBERON:0002365;6.64e-11;31!UBERON:0002330;6.64e-11;31!UBERON:0002037;1.06e-09;6!UBERON:0002368;1.77e-09;33!UBERON:0002081;7.03e-08;2!UBERON:0000949;5.66e-07;43!UBERON:0002680;9.37e-07;9!UBERON:0001895;9.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.00e-18,19;UBERON:0006925,8.00e-18,19;UBERON:0008836,8.00e-18,19;UBERON:0008835,2.14e-15,22;UBERON:0003894,2.14e-15,22;UBERON:0009854,9.99e-15,23;UBERON:0002079,2.41e-14,1;UBERON:0007499,1.51e-13,25;UBERON:0009497,1.51e-13,25;UBERON:0000015,1.51e-13,25;UBERON:0002423,1.51e-13,25;UBERON:0006235,1.51e-13,25;UBERON:0004161,1.51e-13,25;UBERON:0009856,5.01e-13,26;UBERON:0002365,6.41e-11,31;UBERON:0002330,6.41e-11,31;UBERON:0002037,9.26e-10,6;UBERON:0006215,9.26e-10,6;UBERON:0002368,1.15e-09,35;UBERON:0002081,8.04e-08,2;UBERON:0010227,8.04e-08,2;UBERON:0000949,1.70e-07,45;UBERON:0000025,4.89e-07,192;UBERON:0002680,8.59e-07,9;UBERON:0001895,8.59e-07,9;UBERON:0010092,8.59e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,12.7767538168091,8.86184860022106,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.331737779793674,1.77328571372128,0.438770794307945,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.269604531922708,0,1.1713222286267,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,2.4023299700675,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0.945398187686684,0.576911008668165,0.876246070104404,0.295282444544246,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0.104909176269996,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,9.96555189010961,22.5261711150776,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0.573409195690071,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,1.43581454968528,0,0,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,1.56215619722769,0.413373593002368,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0.620597975171371,0,0,0,0,0,0.25458863311266,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p2@AGT | |||
}} |
Revision as of 00:41, 11 January 2014
Short description: | p2@AGT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AGT_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 178bp_to_AB529142, BT006851, DQ891016, DQ894196_5end |
EntrezGene: | AGT |
HGNC: | 333 |
UniProt: | Q86U78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.30e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 8.00e-18 | 19 |
digestive gland | 8.00e-18 | 19 |
liver bud | 8.00e-18 | 19 |
hepatic diverticulum | 2.14e-15 | 22 |
liver primordium | 2.14e-15 | 22 |
digestive tract diverticulum | 9.99e-15 | 23 |
left cardiac atrium | 2.41e-14 | 1 |
epithelial sac | 1.51e-13 | 25 |
epithelium of foregut-midgut junction | 1.51e-13 | 25 |
anatomical boundary | 1.51e-13 | 25 |
hepatobiliary system | 1.51e-13 | 25 |
foregut-midgut junction | 1.51e-13 | 25 |
septum transversum | 1.51e-13 | 25 |
sac | 5.01e-13 | 26 |
exocrine gland | 6.41e-11 | 31 |
exocrine system | 6.41e-11 | 31 |
cerebellum | 9.26e-10 | 6 |
rhombic lip | 9.26e-10 | 6 |
endocrine gland | 1.15e-09 | 35 |
cardiac atrium | 8.04e-08 | 2 |
future cardiac atrium | 8.04e-08 | 2 |
endocrine system | 1.70e-07 | 45 |
tube | 4.89e-07 | 192 |
regional part of metencephalon | 8.59e-07 | 9 |
metencephalon | 8.59e-07 | 9 |
future metencephalon | 8.59e-07 | 9 |