FFCP PHASE1:Hg19::chr1:234040407..234040525,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23616 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IY50 | |||
|association_with_transcript=-153bp_to_ENST00000366618,NM_173508,uc001hvy.1_5end | |||
|coexpression_cluster_id=C3951 | |||
|description=CAGE_peak_2_at_SLC35F3_5end | |||
|id=chr1:234040407..234040525,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.16e-24!254;CL:1000497!2.03e-08!18;CL:0002518!2.03e-08!18;CL:1000449!7.20e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000497;4.61e-11;17!CL:0002518;4.61e-11;17!CL:1000507;3.09e-10;10!CL:1000494;3.09e-10;10!CL:1000449;8.54e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.33e-23,253;CL:1000497,7.20e-11,17;CL:0002518,7.20e-11,17;CL:1000507,6.31e-10,10;CL:1000494,6.31e-10,10;CL:1000449,1.29e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.01e-11;29 | |||
|ontology_enrichment_disease=DOID:305!9.14e-18!106;DOID:0050687!2.03e-13!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.56e-13,106;DOID:0050687,6.35e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0003075!6.14e-25!86;UBERON:0007284!6.14e-25!86;UBERON:0001049!7.27e-24!57;UBERON:0005068!7.27e-24!57;UBERON:0006241!7.27e-24!57;UBERON:0007135!7.27e-24!57;UBERON:0002346!2.75e-23!90;UBERON:0005743!3.57e-22!86;UBERON:0000064!5.02e-21!219;UBERON:0001017!5.09e-21!82;UBERON:0003056!1.91e-20!61;UBERON:0002616!3.08e-20!59;UBERON:0000073!5.82e-20!94;UBERON:0001016!5.82e-20!94;UBERON:0004121!3.56e-19!169;UBERON:0001893!9.12e-19!34;UBERON:0000033!1.15e-18!123;UBERON:0001869!1.22e-18!32;UBERON:0000924!2.24e-18!173;UBERON:0006601!2.24e-18!173;UBERON:0000955!2.34e-18!69;UBERON:0006238!2.34e-18!69;UBERON:0002020!3.29e-18!34;UBERON:0003528!3.29e-18!34;UBERON:0002791!4.15e-18!33;UBERON:0002780!5.36e-18!41;UBERON:0001890!5.36e-18!41;UBERON:0006240!5.36e-18!41;UBERON:0000153!1.24e-17!129;UBERON:0007811!1.24e-17!129;UBERON:0003080!3.20e-17!42;UBERON:0000062!1.63e-14!511;UBERON:0000956!3.51e-13!25;UBERON:0000203!3.51e-13!25;UBERON:0000481!1.65e-12!347;UBERON:0000922!3.24e-11!612;UBERON:0002619!6.76e-11!22;UBERON:0001950!3.68e-10!20;UBERON:0000483!9.79e-10!309;UBERON:0000475!1.67e-09!365;UBERON:0000063!1.88e-09!97;UBERON:0000119!2.68e-09!312;UBERON:0008947!3.82e-09!38;UBERON:0003258!3.82e-09!38;UBERON:0002050!4.20e-09!605;UBERON:0005423!4.20e-09!605;UBERON:0001737!7.38e-09!9;UBERON:0000923!7.39e-09!604;UBERON:0005291!7.39e-09!604;UBERON:0006598!7.39e-09!604;UBERON:0002532!7.39e-09!604;UBERON:0007023!1.15e-08!115;UBERON:0000477!1.67e-08!286;UBERON:0000468!2.96e-08!659;UBERON:0000025!3.59e-08!194;UBERON:0000065!4.86e-08!53;UBERON:0000489!5.23e-08!32;UBERON:0003076!7.18e-08!15;UBERON:0003057!7.18e-08!15;UBERON:0000467!1.09e-07!625;UBERON:0000480!1.40e-07!626;UBERON:0004732!1.89e-07!13;UBERON:0002113!2.48e-07!27;UBERON:0003918!2.48e-07!27;UBERON:0005095!2.48e-07!27;UBERON:0007687!2.48e-07!27;UBERON:0006555!3.30e-07!17;UBERON:0005103!3.30e-07!17;UBERON:0000083!3.30e-07!17;UBERON:0009201!3.30e-07!17;UBERON:0004819!3.30e-07!17;UBERON:0006553!3.30e-07!17;UBERON:0003074!3.30e-07!17;UBERON:0003060!3.30e-07!17;UBERON:0000072!3.73e-07!46;UBERON:0004733!4.90e-07!12;UBERON:0002028!4.90e-07!12;UBERON:0007277!4.90e-07!12;UBERON:0001048!7.03e-07!168;UBERON:0004211!7.20e-07!16;UBERON:0001285!7.20e-07!16;UBERON:0007684!7.20e-07!16;UBERON:0003220!7.20e-07!16;UBERON:0004208!7.20e-07!16;UBERON:0001004!7.30e-07!72;UBERON:0004111!9.02e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.95e-23;32!UBERON:0002791;9.10e-22;32!UBERON:0001893;4.56e-21;34!UBERON:0003528;1.42e-19;34!UBERON:0002020;1.42e-19;34!UBERON:0000956;1.27e-17;25!UBERON:0000203;1.27e-17;25!UBERON:0002780;1.29e-15;41!UBERON:0001890;1.29e-15;41!UBERON:0000073;8.13e-15;53!UBERON:0002616;8.13e-15;53!UBERON:0001950;1.29e-14;20!UBERON:0002619;2.71e-14;22!UBERON:0001737;2.58e-12;9!UBERON:0001557;2.58e-12;9!UBERON:0000955;2.22e-11;68!UBERON:0001017;2.42e-10;75!UBERON:0004211;3.09e-10;10!UBERON:0009773;3.09e-10;10!UBERON:0001231;3.09e-10;10!UBERON:0004810;3.09e-10;10!UBERON:0006555;8.54e-09;15!UBERON:0004819;8.54e-09;15!UBERON:0001285;8.54e-09;15!UBERON:0007684;8.54e-09;15!UBERON:0002113;4.50e-08;24!UBERON:0011143;4.50e-08;24!UBERON:0001016;7.02e-08;83!UBERON:0009663;1.34e-07;7!UBERON:0000072;1.90e-07;37!UBERON:0000065;2.20e-07;44!UBERON:0002037;4.40e-07;6!UBERON:0002420;4.49e-07;9!UBERON:0007245;4.49e-07;9!UBERON:0010009;4.49e-07;9!UBERON:0010011;4.49e-07;9!UBERON:0000454;4.49e-07;9!UBERON:0000369;5.44e-07;4!UBERON:0002435;5.44e-07;4!UBERON:0000204;5.44e-07;4!UBERON:0004807;7.75e-07;22!UBERON:0000489;7.88e-07;29!UBERON:0004732;8.30e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.19e-26,53;UBERON:0002616,4.19e-26,53;UBERON:0001869,8.56e-26,32;UBERON:0010371,1.43e-25,104;UBERON:0001049,2.43e-25,56;UBERON:0005068,2.43e-25,56;UBERON:0006241,2.43e-25,56;UBERON:0007135,2.43e-25,56;UBERON:0002791,9.18e-24,32;UBERON:0001893,1.02e-23,34;UBERON:0003075,2.24e-22,82;UBERON:0007284,2.24e-22,82;UBERON:0000955,4.99e-22,68;UBERON:0006238,4.99e-22,68;UBERON:0001017,5.11e-22,81;UBERON:0003528,7.85e-22,34;UBERON:0002020,7.85e-22,34;UBERON:0002780,2.84e-21,41;UBERON:0001890,2.84e-21,41;UBERON:0003080,2.84e-21,41;UBERON:0006240,2.84e-21,41;UBERON:0003056,6.00e-21,61;UBERON:0002346,1.34e-20,86;UBERON:0001016,3.28e-19,89;UBERON:0000956,8.14e-18,25;UBERON:0000203,8.14e-18,25;UBERON:0011216,6.91e-16,223;UBERON:0004121,2.08e-15,171;UBERON:0000924,2.08e-15,171;UBERON:0006601,2.08e-15,171;UBERON:0001950,9.08e-15,20;UBERON:0002619,1.71e-14,22;UBERON:0010314,1.86e-14,132;UBERON:0001737,2.69e-12,9;UBERON:0000025,5.29e-10,192;UBERON:0004810,6.31e-10,10;UBERON:0000483,3.99e-09,306;UBERON:0006555,4.12e-09,16;UBERON:0004819,4.12e-09,16;UBERON:0000119,8.03e-09,309;UBERON:0004211,1.29e-08,15;UBERON:0009773,1.29e-08,15;UBERON:0001231,1.29e-08,15;UBERON:0001285,1.29e-08,15;UBERON:0007684,1.29e-08,15;UBERON:0004208,1.29e-08,15;UBERON:0004111,1.43e-08,240;UBERON:0008947,1.66e-08,38;UBERON:0003258,1.66e-08,38;UBERON:0002113,6.52e-08,26;UBERON:0003918,6.52e-08,26;UBERON:0011143,6.52e-08,26;UBERON:0005095,6.52e-08,26;UBERON:0007687,6.52e-08,26;UBERON:0000922,1.06e-07,592;UBERON:0009663,1.60e-07,7;UBERON:0002420,4.28e-07,9;UBERON:0007245,4.28e-07,9;UBERON:0010009,4.28e-07,9;UBERON:0010011,4.28e-07,9;UBERON:0000454,4.28e-07,9;UBERON:0002037,4.79e-07,6;UBERON:0006215,4.79e-07,6;UBERON:0000369,5.56e-07,4;UBERON:0002435,5.56e-07,4;UBERON:0000204,5.56e-07,4;UBERON:0010082,5.56e-07,4;UBERON:0000065,5.60e-07,54;UBERON:0000489,8.32e-07,31;UBERON:0000200,9.58e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,1.22866968250754,4.88460817580699,0.436882744260345,0,0,0,0,0,1.46062018077475,0,1.47745269692145,3.26401105990805,3.76145665773705,5.15224776835902,11.9080749813409,12.5542639594803,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74150969775797,1.99556457716308,1.31752178539689,1.37528029272598,6.55731518926576,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,4.05847791642923,3.27295344709002,8.31733326628111,3.29329006549908,2.78312513475119,3.83440011469411,2.798848485415,1.7662459561294,5.10968302706162,0,0,0,0,0,8.87301000298829,7.24914167335837,9.3994301654558,9.26469370952109,9.80457498415828,10.2026366217772,8.76403503041069,6.27908688401107,5.77120735419586,0,0,0,0,0,0,0,0,0,2.57351715447788,3.62175941848464,2.24803506515239,2.51322431029077,1.85176890317059,0.325808305310325,0,4.3299402607582,0.579652024875384,0.352226082707465,0,0,0,0,0,0,0,0,3.74935335947108,1.51183915378974,2.69372684760534,3.31366534000539,6.39394664730716,9.58456697913028,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0.508189248444927,0,1.54657762555539,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0.303127571446259,4.99306318531491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40607764363942,1.74953878978203,0,0,0,4.06079651616671,1.30926073077505,8.62784746094541,5.84556898613043,1.16106791782163,0,0.170093705276516,0.647747748306418,1.54227252690289,1.08378575017541,1.00337954770971,6.88165937221603,4.98645605357235,4.92524460388792,0.219259876645935,0.261435451024901,1.53870075069834,0.328014645699706,0.325378394664303,0,0,0,1.72279661398852,1.30012049207304,0,0.193341436584244,0,0,0,0,0,0,0.267096106940212,0.826424576804891,1.34533047155574,9.44334072459923,1.92199783625545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0.578775534266688,0,0,0.6196469961995,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,1.34710957815717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3996776842137,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,1.23087398947712,0.270455678475983,0,0,0,0,0,0,17.900577248804,0.23874448473769,0,0.307160702099232,0,1.82870241333667,0.222617410045812,0,0,0,0,0.503865495708552,0,0,0.311039587661807,21.6582726265058,0,0,0,0,0,1.93866549219044,2.04089815956073,5.98841394003583,0,0,0,1.365521379426,0.254253650292766,6.61885508950222,0,0,2.95162491386597,19.4863104879045,51.3740828544238,3.05163472634166,8.62518227463552,5.31985714116385,1.31631238292384,3.48603083260768,0,0.769502585037971,0.797594390929008,0,0,0.108647371922008,0,3.84709892287822,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0,22.1547967754428,1.14262965711403,0,0,0,0.0884575645033392,0,0,0.370691816839509,0.626531697032732,0.404406797884062,0.802577647298789,2.81117334870407,0,0,0,0,0,1.83643656978294,0,0.300646838828985,0,0.664653872707185,0,0.627865836814451,0,0.284609546029793,0,0,0.587954384486266,0,1.04836000945218,0,0.290268993867255,0.219267951258557,0.246346371159628,0.0969890164884194,0,1.12990370390266,8.0854735541583,5.56400912768371,3.73533696139684,0.391102765469606,0.0801588202515337,0,2.39771531498556,1.58499458869517,0,0,4.03353434366819,9.5674452385383,0,0,0,0,0,10.2071449080664,3.01191833562385,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,5.80722140937018,0,0.795229689809303,1.63444087333891,1.28602518772015,1.37539436597234,0.415440338029185,0,0,4.9207140893,0,0.157611414598396,0.314727528809989,4.9632158164121,4.84075816198681,22.2621628890557,0,0,0,0,0.864221491201268,0.326587360109409,5.98650957812437,1.4776653734881,0,0.226624183040251,0.58620893471233,0,0.904980694530854,0.13223260174269,7.52782086691049,2.11444506695002,0.106787412567695,0,0,0,0,0,3.19170628885091,0,0,0,0,0.785270481251171,1.77213635993397,3.53876168215693,4.88244629755349,1.14681839138014,0.998361463831671,1.24192805882767,19.9222034308172,0,0,0,1.17632909849086,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1304703708704,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,9.43837168995786,0.643324774124777,0,2.72047110614727,6.48262928106735,4.40526068111642,3.22359913946677,0.926404341482917,1.31570429747224,3.88716121080938,1.15748422962549,0.337884881306145,2.56241518587947,0.3454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| |||
|short_description=p2@SLC35F3 | |||
}} |
Revision as of 00:45, 11 January 2014
Short description: | p2@SLC35F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC35F3_5end |
Coexpression cluster: | C3951_caudate_putamen_mucinous_large_clear_nucleus_bile |
Association with transcript: | -153bp_to_ENST00000366618, NM_173508, uc001hvy.1_5end |
EntrezGene: | SLC35F3 |
HGNC: | 23616 |
UniProt: | Q8IY50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.33e-23 | 253 |
kidney cell | 7.20e-11 | 17 |
kidney epithelial cell | 7.20e-11 | 17 |
kidney tubule cell | 6.31e-10 | 10 |
nephron tubule epithelial cell | 6.31e-10 | 10 |
epithelial cell of nephron | 1.29e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.56e-13 | 106 |
cell type cancer | 6.35e-09 | 143 |