FFCP PHASE1:Hg19::chr1:236046891..236046902,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENST00000468107_5end | |||
|coexpression_cluster_id=C610 | |||
|description=CAGE_peak_12_at_LYST_5end | |||
|id=chr1:236046891..236046902,- | |||
|ontology_enrichment_celltype=CL:0000148!8.38e-17!10;CL:0000541!8.38e-17!10;CL:0000990!2.55e-13!8;CL:0000147!1.17e-11!14;CL:0002567!1.83e-11!3;CL:0000451!9.34e-11!10;CL:0000710!8.32e-08!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.24e-87;10!CL:0000147;1.29e-62;14!CL:0002567;1.81e-54;3!CL:0000710;7.89e-44;20!CL:0000075;1.91e-32;27!CL:0002077;1.04e-22;34!CL:0002566;1.56e-19;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.33e-87,10;CL:0000541,1.33e-87,10;CL:0000147,1.35e-62,14;CL:0002567,2.17e-54,3;CL:0000710,8.15e-44,20;CL:0000075,1.95e-32,27;CL:0002077,9.90e-26,34;CL:0000333,2.63e-20,41;CL:0002566,1.56e-19,1;CL:0000133,3.06e-14,59;CL:0000221,1.10e-11,72 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.69e-19;1!CL:0000133;6.11e-08;59 | |||
|ontology_enrichment_disease=DOID:1909!3.03e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.32e-37;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.94e-37,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.31e-15!115;UBERON:0001049!1.45e-09!57;UBERON:0005068!1.45e-09!57;UBERON:0006241!1.45e-09!57;UBERON:0007135!1.45e-09!57;UBERON:0003076!3.61e-09!15;UBERON:0003057!3.61e-09!15;UBERON:0005743!7.75e-08!86;UBERON:0001017!2.31e-07!82;UBERON:0003075!4.95e-07!86;UBERON:0007284!4.95e-07!86;UBERON:0000073!9.86e-07!94;UBERON:0001016!9.86e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,1.39303789839414,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,6.60378100638558,4.20187268114105,8.20522130470329,3.4214489204541,8.02054443085923,4.20480280981484,4.28739648945867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,11.2220346980819,3.42558400253961,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.398594520940089,0.817826971279221,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,2.34640942403454,0,0,0.665756774185513,0,0 | |||
|short_description=p12@LYST | |||
}} |
Revision as of 00:54, 11 January 2014
Short description: | p12@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_LYST_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | 13bp_to_ENST00000468107_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.33e-87 | 10 |
melanoblast | 1.33e-87 | 10 |
pigment cell | 1.35e-62 | 14 |
light melanocyte | 2.17e-54 | 3 |
neurecto-epithelial cell | 8.15e-44 | 20 |
columnar/cuboidal epithelial cell | 1.95e-32 | 27 |
ecto-epithelial cell | 9.90e-26 | 34 |
migratory neural crest cell | 2.63e-20 | 41 |
dark melanocyte | 1.56e-19 | 1 |
neurectodermal cell | 3.06e-14 | 59 |
ectodermal cell | 1.10e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.94e-37 | 2 |