FFCP PHASE1:Hg19::chr10:20017427..20017436,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=42bp_to_ENST00000423551,ENST00000431157,ENST00000451713,uc001iqf.2_5end | |||
|coexpression_cluster_id=C975 | |||
|description=CAGE_peak_6_at_ENST00000423551_5end,CAGE_peak_6_at_ENST00000431157_5end,CAGE_peak_6_at_ENST00000451713_5end,CAGE_peak_6_at_uc001iqf.2_5end | |||
|id=chr10:20017427..20017436,- | |||
|ontology_enrichment_celltype=CL:0002274!3.37e-34!5;CL:0000457!3.37e-34!5;CL:0002191!3.37e-34!5;CL:0000097!3.37e-34!5;CL:0000831!3.37e-34!5;CL:0002028!3.37e-34!5;CL:0000163!6.13e-19!9;CL:0000763!1.83e-13!112;CL:0000049!1.83e-13!112;CL:0000037!1.03e-08!172;CL:0000566!1.03e-08!172;CL:0002032!4.50e-08!165;CL:0000837!4.50e-08!165;CL:0000988!4.85e-08!182;CL:0001024!9.72e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.36e-90;5!CL:0000163;1.58e-50;9!CL:0000151;8.72e-12;36!CL:0000763;6.18e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.49e-90,5;CL:0002028,1.49e-90,5;CL:0000163,1.66e-50,9;CL:0000763,6.96e-13,108;CL:0000049,6.96e-13,108;CL:0000151,8.77e-13,36;CL:0002032,1.85e-08,161;CL:0000837,1.85e-08,161;CL:0000037,4.44e-08,168;CL:0000988,1.23e-07,177;CL:0000839,6.97e-07,66;CL:0000557,8.81e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.61e-23!31;DOID:1036!2.28e-20!8;DOID:1240!2.77e-18!39;DOID:2531!1.64e-13!51;DOID:0060083!1.64e-13!51;DOID:9119!8.51e-08!1;DOID:8552!1.26e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.02e-08;31!DOID:1240;1.17e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.38e-09,31;DOID:1240,1.11e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002372!1.99e-07!1;UBERON:0001961!1.99e-07!1;UBERON:0001744!1.99e-07!1;UBERON:0001735!1.99e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91195885475132,6.0753419469126,5.1832028885193,5.04419836959365,4.03975786964416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5924286857907,0.5745161103971,0,0,2.24637742490767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39544717906069,0.166211681900156,0.225595660617181,0,0,0.37950746544837,0.953619473882272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985110248992068,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@ENST00000423551,p6@ENST00000431157,p6@ENST00000451713,p6@uc001iqf.2 | |||
}} |
Revision as of 02:03, 11 January 2014
Short description: | p6@ENST00000423551, p6@ENST00000431157, p6@ENST00000451713, p6@uc001iqf.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ENST00000423551_5end, CAGE_peak_6_at_ENST00000431157_5end, CAGE_peak_6_at_ENST00000451713_5end, CAGE_peak_6_at_uc001iqf.2_5end |
Coexpression cluster: | C975_Mast_chronic_CD34_acute_leukemia_CD133_Whole |
Association with transcript: | 42bp_to_ENST00000423551, ENST00000431157, ENST00000451713, uc001iqf.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.49e-90 | 5 |
basophil mast progenitor cell | 1.49e-90 | 5 |
endocrine cell | 1.66e-50 | 9 |
myeloid cell | 6.96e-13 | 108 |
common myeloid progenitor | 6.96e-13 | 108 |
secretory cell | 8.77e-13 | 36 |
hematopoietic oligopotent progenitor cell | 1.85e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-08 | 161 |
hematopoietic stem cell | 4.44e-08 | 168 |
hematopoietic cell | 1.23e-07 | 177 |
myeloid lineage restricted progenitor cell | 6.97e-07 | 66 |
granulocyte monocyte progenitor cell | 8.81e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.38e-09 | 31 |
leukemia | 1.11e-07 | 39 |