FFCP PHASE1:Hg19::chr10:81892415..81892447,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219348 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19255 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JTB6 | |||
|association_with_transcript=-29bp_to_ENST00000372263_5end | |||
|coexpression_cluster_id=C2074 | |||
|description=CAGE_peak_2_at_PLAC9_5end | |||
|id=chr10:81892415..81892447,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.57e-36!180;CL:0000680!2.32e-19!57;CL:0000056!2.32e-19!57;CL:0000355!2.32e-19!57;CL:0000183!1.15e-18!59;CL:0000057!1.20e-18!75;CL:0000187!1.45e-18!54;CL:0000393!1.42e-17!60;CL:0000211!1.42e-17!60;CL:0000192!3.40e-14!42;CL:0000514!3.40e-14!42;CL:0000136!2.75e-12!15;CL:0000359!4.04e-11!32;CL:0000222!2.64e-09!119;CL:0002334!7.62e-08!12;CL:0002494!1.05e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.54e-12;13!CL:0000187;4.84e-12;55!CL:0000192;6.09e-12;43!CL:0000359;1.15e-11;32!CL:0000393;1.41e-10;61!CL:0000211;1.41e-10;61!CL:0000057;5.70e-09;73!CL:0002334;7.90e-09;12!CL:0002494;9.40e-09;16!CL:0002620;4.56e-07;23!CL:0002570;5.54e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.24e-22,58;CL:0000056,3.24e-22,58;CL:0000355,3.24e-22,58;CL:0000057,5.23e-22,76;CL:0000187,2.70e-21,55;CL:0000393,2.22e-19,61;CL:0000211,2.22e-19,61;CL:0000192,3.02e-16,43;CL:0000514,3.02e-16,43;CL:0000136,6.22e-14,15;CL:0000359,5.08e-12,32;CL:0002334,8.22e-09,12;CL:0002494,1.19e-08,16;CL:0000048,6.19e-08,427;CL:0000222,9.93e-08,121;CL:0000723,3.24e-07,433;CL:0002570,5.40e-07,8;CL:0002620,7.38e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000355;5.54e-12;58!CL:0000514;6.09e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.35e-24!83;UBERON:0002329!2.35e-24!83;UBERON:0003077!2.35e-24!83;UBERON:0003059!2.35e-24!83;UBERON:0007282!2.35e-24!83;UBERON:0009618!2.35e-24!83;UBERON:0007285!2.35e-24!83;UBERON:0004290!1.75e-23!70;UBERON:0002385!3.50e-21!63;UBERON:0001015!3.50e-21!63;UBERON:0000383!3.50e-21!63;UBERON:0001134!7.54e-21!61;UBERON:0002036!7.54e-21!61;UBERON:0003082!7.54e-21!61;UBERON:0000486!5.36e-19!82;UBERON:0000475!4.71e-17!365;UBERON:0004872!6.22e-17!84;UBERON:0000481!1.22e-13!347;UBERON:0005256!4.09e-13!143;UBERON:0000119!5.09e-13!312;UBERON:0000483!2.39e-12!309;UBERON:0007100!1.25e-11!27;UBERON:0001981!3.09e-11!60;UBERON:0007500!3.09e-11!60;UBERON:0004537!3.09e-11!60;UBERON:0006965!3.09e-11!60;UBERON:0001637!3.29e-11!42;UBERON:0003509!3.29e-11!42;UBERON:0004572!3.29e-11!42;UBERON:0000948!3.67e-11!24;UBERON:0005498!3.67e-11!24;UBERON:0004140!3.67e-11!24;UBERON:0009881!3.67e-11!24;UBERON:0004141!3.67e-11!24;UBERON:0003084!3.67e-11!24;UBERON:0007005!3.67e-11!24;UBERON:0004139!3.67e-11!24;UBERON:0004291!3.67e-11!24;UBERON:0002049!4.55e-11!79;UBERON:0007798!4.55e-11!79;UBERON:0001009!6.81e-11!113;UBERON:0004535!2.44e-10!110;UBERON:0001013!2.94e-10!14;UBERON:0002100!7.28e-10!216;UBERON:0000477!7.64e-10!286;UBERON:0004573!1.93e-09!33;UBERON:0004571!1.93e-09!33;UBERON:0000055!5.00e-09!69;UBERON:0000468!1.01e-08!659;UBERON:0000490!1.15e-08!138;UBERON:0004111!1.34e-08!241;UBERON:0003914!4.50e-08!118;UBERON:0007023!6.49e-08!115;UBERON:0000025!6.62e-08!194;UBERON:0003102!2.58e-07!95;UBERON:0003104!3.06e-07!238;UBERON:0009142!3.06e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.79e-12;25!UBERON:0000948;1.11e-11;22!UBERON:0001013;1.38e-11;14!UBERON:0002385;4.29e-11;31!UBERON:0001015;4.29e-11;31!UBERON:0000383;4.29e-11;31!UBERON:0004573;4.05e-08;33!UBERON:0004571;4.05e-08;33!UBERON:0001637;1.47e-07;42!UBERON:0003509;1.47e-07;42!UBERON:0004572;1.47e-07;42!UBERON:0001134;3.18e-07;16!UBERON:0002036;3.18e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,5.51e-27,71;UBERON:0003059,5.51e-27,71;UBERON:0007282,5.51e-27,71;UBERON:0004290,5.51e-27,71;UBERON:0009618,5.51e-27,71;UBERON:0007524,8.11e-27,73;UBERON:0003077,3.14e-26,72;UBERON:0007285,3.14e-26,72;UBERON:0002385,2.53e-24,64;UBERON:0001015,2.53e-24,64;UBERON:0000383,2.53e-24,64;UBERON:0001134,6.18e-24,62;UBERON:0002036,6.18e-24,62;UBERON:0003082,6.18e-24,62;UBERON:0007503,3.70e-22,78;UBERON:0000486,1.27e-21,83;UBERON:0005256,7.95e-16,122;UBERON:0003104,1.71e-15,160;UBERON:0009142,1.71e-15,160;UBERON:0004872,2.46e-14,83;UBERON:0007100,3.56e-13,27;UBERON:0000948,1.23e-12,24;UBERON:0005498,1.23e-12,24;UBERON:0004140,1.23e-12,24;UBERON:0009881,1.23e-12,24;UBERON:0004141,1.23e-12,24;UBERON:0003084,1.23e-12,24;UBERON:0007005,1.23e-12,24;UBERON:0004139,1.23e-12,24;UBERON:0004291,1.23e-12,24;UBERON:0001013,1.36e-11,14;UBERON:0001637,7.95e-11,42;UBERON:0003509,7.95e-11,42;UBERON:0004572,7.95e-11,42;UBERON:0000490,6.60e-10,148;UBERON:0001009,7.63e-10,112;UBERON:0002100,1.10e-09,199;UBERON:0004535,2.96e-09,109;UBERON:0004573,3.80e-09,33;UBERON:0004571,3.80e-09,33;UBERON:0007500,8.83e-09,59;UBERON:0001981,8.83e-09,59;UBERON:0004537,8.83e-09,59;UBERON:0006965,8.83e-09,59;UBERON:0003102,1.84e-08,99;UBERON:0002049,2.05e-08,78;UBERON:0007798,2.05e-08,78;UBERON:0000479,4.37e-08,773;UBERON:0000926,1.08e-07,315;UBERON:0004120,1.08e-07,315;UBERON:0006603,1.08e-07,315;UBERON:0000119,1.88e-07,309;UBERON:0002199,3.71e-07,46;UBERON:0002416,3.71e-07,46;UBERON:0000055,4.11e-07,68;UBERON:0000483,6.42e-07,306 | |||
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| |||
|short_description=p2@PLAC9 | |||
}} |
Revision as of 03:47, 11 January 2014
Short description: | p2@PLAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLAC9_5end |
Coexpression cluster: | C2074_Mesenchymal_Osteoblast_Adipocyte_mature_Chondrocyte_Synoviocyte_Preadipocyte |
Association with transcript: | -29bp_to_ENST00000372263_5end |
EntrezGene: | PLAC9 |
HGNC: | 19255 |
UniProt: | Q5JTB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.24e-22 | 58 |
myoblast | 3.24e-22 | 58 |
multi-potent skeletal muscle stem cell | 3.24e-22 | 58 |
fibroblast | 5.23e-22 | 76 |
muscle cell | 2.70e-21 | 55 |
electrically responsive cell | 2.22e-19 | 61 |
electrically active cell | 2.22e-19 | 61 |
smooth muscle cell | 3.02e-16 | 43 |
smooth muscle myoblast | 3.02e-16 | 43 |
fat cell | 6.22e-14 | 15 |
vascular associated smooth muscle cell | 5.08e-12 | 32 |
preadipocyte | 8.22e-09 | 12 |
cardiocyte | 1.19e-08 | 16 |
multi fate stem cell | 6.19e-08 | 427 |
mesodermal cell | 9.93e-08 | 121 |
somatic stem cell | 3.24e-07 | 433 |
mesenchymal stem cell of adipose | 5.40e-07 | 8 |
skin fibroblast | 7.38e-07 | 23 |