FFCP PHASE1:Hg19::chr10:94449649..94449664,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3087 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4901 | |||
|TSSclassifier=strong | |||
|UniProt=B1AQ17,Q03014 | |||
|association_with_transcript=-16bp_to_NM_002729,uc001kid.2_5end | |||
|coexpression_cluster_id=C3059 | |||
|description=CAGE_peak_3_at_HHEX_5end | |||
|id=chr10:94449649..94449664,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.53e-16!112;CL:0000049!1.53e-16!112;CL:0000037!1.01e-14!172;CL:0000566!1.01e-14!172;CL:0000988!2.77e-14!182;CL:0002032!1.40e-13!165;CL:0000837!1.40e-13!165;CL:0000115!4.16e-10!35;CL:0000236!9.62e-09!14;CL:0000557!3.54e-08!71;CL:0002078!7.42e-08!44;CL:0000766!1.60e-07!76;CL:0000839!9.73e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.07e-11;13!CL:0000115;2.09e-10;36!CL:0002139;1.23e-07;24!CL:0002078;7.60e-07;45!CL:0000763;8.62e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.41e-18,168;CL:0000763,2.47e-18,108;CL:0000049,2.47e-18,108;CL:0002032,3.46e-17,161;CL:0000837,3.46e-17,161;CL:0000988,1.65e-16,177;CL:0000115,6.43e-13,36;CL:0000236,2.49e-11,14;CL:0002078,2.97e-11,45;CL:0002139,4.11e-08,24;CL:0000738,1.88e-07,136;CL:0000557,2.61e-07,67;CL:0000766,3.88e-07,72;CL:0000071,4.67e-07,18;CL:0002546,4.67e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!5.21e-14!31;DOID:1240!2.29e-11!39;DOID:2531!5.45e-08!51;DOID:0060083!5.45e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.12e-16;31!DOID:1240;1.03e-11;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.47e-17,31;DOID:1240,7.63e-15,39;DOID:2531,1.49e-10,51;DOID:0060083,1.49e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0003081!1.46e-09!216;UBERON:0002193!5.87e-09!112;UBERON:0002405!8.60e-09!115;UBERON:0003914!1.16e-07!118;UBERON:0002390!2.38e-07!102;UBERON:0003061!2.38e-07!102;UBERON:0001474!2.80e-07!86;UBERON:0002371!5.11e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.02e-07,93;UBERON:0002193,2.07e-07,108;UBERON:0004638,4.67e-07,18;UBERON:0001986,4.67e-07,18;UBERON:0004852,4.67e-07,18;UBERON:0003081,6.72e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,1.39560233594486,0.218441372130172,0,0.495065411840187,0,2.01697543935533,1.80808358407193,3.65155045193687,1.46379839637152,0.369363174230364,0.612002073732759,0.626909442956176,0,0.547497700291537,0,0.305653622991805,0.0821005894499457,0.393553906568396,2.36018566109342,1.15148819429164,1.85779347979291,0,0.30120591877825,0.369754010166788,0.619737604642413,0,2.64240395401362,0,0.601633342410425,1.51907609501096,1.34349284543955,1.29557466407592,3.34848237924443,2.18097358169347,4.53451132426571,3.15359279544161,0.929716147622738,0.411167888021826,1.23882548358041,0.575384784644301,0.256160706529101,0,0,0,1.35426486594342,0.752969358170419,0.272906150057846,0.674170453335254,1.22433556948361,0,0,0.329851300186716,0.797854630486527,0.852449501065388,0.290209238628584,0,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,0,0.736555271975129,0.632924774881769,1.47878700418359,2.12604299965044,2.30624510059213,2.47122988522289,2.70318407114711,1.28580469357664,2.56511469367124,3.18266683518544,3.83594722905731,10.5597746676794,6.55366333514558,4.44754626931777,3.41384178053206,6.80673177961221,4.59801951963587,4.62731410949403,4.77026877267682,5.12291672198504,3.52342313622563,4.20500550937752,10.5737062863221,5.04457706683382,3.68737718685108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.451725357233318,0.639933055772092,0,0.473554504088034,0,0,0.534880391567015,0.144824403882799,2.43806866313962,0,0.12786256184353,0,0,0.289693037921647,0,0,1.03988298880475,0.443458794925128,0.87834785693126,0.72038491523742,0,0,1.29818957461873,1.39303789839414,2.12732736830184,3.57735936458013,3.43196946468077,4.82894751728434,1.39133685156694,1.72046919021225,2.77712401286075,2.26123176769604,2.09749718104953,1.37559020970034,1.46296476575767,0.775250277507987,2.13459757612026,2.00832367658802,1.20848795132744,1.52054421143703,2.68468263302986,1.83831540172934,1.62028389576352,0.892997282840798,2.46982309888787,1.23872628531654,0,0,1.83201743930407,2.63560834872127,0,0,0,0.506522046658319,0.132409180813219,0.860509862246441,0,0,1.06748995729705,1.48000529050296,1.24484414159907,2.2900814251847,0.653847612453835,0.605429710579726,0.576175924479999,0.468642863667593,0.936480230490962,0,0.149448680551801,0.704606991862589,0,0.140450806702248,0.61246251376468,0.61417158655884,1.03325781175765,0,1.48360157567134,0,0.718618141816238,0,0.125118519871964,1.38532057742091,0,0,0.45071417671979,0.680593098960126,0.179389635688862,0,0,0,0.206105058476878,0,0.18611685633159,0,0,0.252433774244115,0,0.646584227275248,0,0,0.339121184620975,0,0,0,0,0.397589304964456,0.69716365721711,0.310983165046111,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0.709840800239063,0.842923450390509,0.723033089650446,1.10293972732394,1.08939722046203,1.42362371466658,0.404493924480493,0.784885860501384,0.38474715694639,9.59602091012043,4.20725321410337,0,1.47008711385542,0,0,1.77236972004421,0,0.491953754172454,0.686271241194102,0,0,0,0,2.93227474779292,2.07986957055916,0,1.15930404975077,0.469634776943287,2.16549671641611,0.925971025153221,1.90254152234598,0.790204397959275,0.858486162094873,2.46217006087397,1.8720341211139,2.52672975890838,0,0,0.141775097242386,0,0.290633938513962,0,0.492663237895943,5.72314821085969,3.52457796419313,5.47655822984453,7.5745460055828,0.63497894292169,0.763976851116555,1.17217447210047,1.71072446022705,1.13110241973656,0.901029173531752,1.14330573052231,0.448524337381443,0,0.4400297149257,0.517086863031111,0,0,0,0,0.771622122786426,1.41849132023278,0.532844358032199,1.42977993658148,1.08524321078289,0.823240336780769,0,0.710783897485092,0,0,0,0,2.43247561282381,2.00902836572851,0,0.718874566474748,0,0,0,0,0,0,0.591092280605782,1.07813787429759,1.02674429023799,0,0,0,0,0,0,0,0.828831026872071,0.49076596687656,2.00068208423871,0.271265023699736,0.207970861530807,0.535286966391485,0.157702415033935,0.35142424497814,0,0,1.03473071292505,0,0,0.781952530212746,0.391602314925481,0.343143423810856,0.82707210449155,0.647142602455851,1.28073069364133,0,0,0.30239029332968,0,0,0,0,0.511707249066704,0.160853921143607,0,0.308419387605311,0,0,2.07701771673448,0.116210378459959,0.604297247958111,0,0.0920809889358963,0.114814448164607,1.45672934405374,1.83574180943194,0.902399225814824,0.0770153371044148,2.35304930753057,1.46139224653261,0.316654886678627,4.54933536283586,2.89159298970077,0.863663664408557,3.08454505380579,1.08378575017541,0.501689773854853,1.27438136522519,0,2.46262230194396,0,0,0.769350375349168,1.31205858279882,0.650756789328606,0.412164046590889,0.457847324091717,0.577566499444116,0,0,0,0.386682873168488,0.154048617114644,0.15350367472613,0.275673144969061,0,0,0.170453254832202,0,0,0.384380134730212,0.127612712494584,0.30347334256665,1.39453664789186,0.62962469366128,0.6970372701606,0.924100740528266,0.532306030317022,1.73986598415015,0.74129687641568,0.429374660225974,0.372158369359667,0,0.57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| |||
|short_description=p3@HHEX | |||
}} |
Revision as of 04:11, 11 January 2014
Short description: | p3@HHEX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HHEX_5end |
Coexpression cluster: | C3059_thyroid_Renal_Smooth_Hepatic_acute_CD34_Endothelial |
Association with transcript: | -16bp_to_NM_002729, uc001kid.2_5end |
EntrezGene: | HHEX |
HGNC: | 4901 |
UniProt: | B1AQ17Q03014 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.41e-18 | 168 |
myeloid cell | 2.47e-18 | 108 |
common myeloid progenitor | 2.47e-18 | 108 |
hematopoietic oligopotent progenitor cell | 3.46e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.46e-17 | 161 |
hematopoietic cell | 1.65e-16 | 177 |
endothelial cell | 6.43e-13 | 36 |
B cell | 2.49e-11 | 14 |
meso-epithelial cell | 2.97e-11 | 45 |
endothelial cell of vascular tree | 4.11e-08 | 24 |
leukocyte | 1.88e-07 | 136 |
granulocyte monocyte progenitor cell | 2.61e-07 | 67 |
myeloid leukocyte | 3.88e-07 | 72 |
blood vessel endothelial cell | 4.67e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.67e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.02e-07 | 93 |
hemolymphoid system | 2.07e-07 | 108 |
blood vessel endothelium | 4.67e-07 | 18 |
endothelium | 4.67e-07 | 18 |
cardiovascular system endothelium | 4.67e-07 | 18 |
lateral plate mesoderm | 6.72e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.47e-17 | 31 |
leukemia | 7.63e-15 | 39 |
hematologic cancer | 1.49e-10 | 51 |
immune system cancer | 1.49e-10 | 51 |