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FFCP PHASE1:Hg19::chr10:127824191..127824203,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:127824191..127824203,-|id=chr10:127824191..127824203,-|ontology_enrichment_celltype=CL:0000055!3.63e-13!180;CL:0000048!4.99e-10!430;CL:0000723!1.70e-09!436;CL:0000034!8.13e-09!444;CL:0000057!5.12e-08!75;CL:0002320!2.85e-07!365|ontology_enrichment_celltype_v019=CL:0002570;2.50e-14;8!CL:0000134;1.43e-13;55!CL:0000048;1.10e-12;58!CL:0000723;3.38e-11;61!CL:0002541;5.30e-11;3!CL:0000135;1.24e-10;3!CL:0000388;1.24e-10;3!CL:0000034;4.02e-10;69!CL:0000511;2.12e-08;1!CL:0002625;2.12e-08;1!CL:0000216;2.12e-08;1|ontology_enrichment_celltype_v019_2=CL:0002570,2.69e-14,8;CL:0002541,5.59e-11,3;CL:0000135,8.26e-11,3;CL:0000388,8.26e-11,3;CL:0000511,1.59e-08,1;CL:0002625,1.59e-08,1;CL:0000216,1.59e-08,1|ontology_enrichment_development_v019=UBERON:0003124;5.80e-09;1|ontology_enrichment_disease=DOID:2394!6.75e-11!14|ontology_enrichment_disease_v019=DOID:2394;1.37e-12;14|ontology_enrichment_disease_v019_2=DOID:2394,1.46e-12,14|ontology_enrichment_uberon=UBERON:0002118!8.66e-08!5;UBERON:0004532!8.66e-08!5;UBERON:0002384!3.02e-07!375;UBERON:0001013!8.08e-07!14|ontology_enrichment_uberon_v019=UBERON:0003124;5.30e-11;3!UBERON:0000920;5.30e-11;3!UBERON:0007846;1.24e-10;3!UBERON:0000043;1.24e-10;3!UBERON:0007845;1.24e-10;3!UBERON:0000992;5.37e-09;13!UBERON:0001136;2.12e-08;1!UBERON:0001343;2.12e-08;1!UBERON:0004910;2.12e-08;1!UBERON:0004813;2.12e-08;1!UBERON:0000991;2.49e-08;21!UBERON:0001013;2.95e-08;14!UBERON:0002119;5.42e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.59e-11,3;UBERON:0007846,8.26e-11,3;UBERON:0000043,8.26e-11,3;UBERON:0007845,8.26e-11,3;UBERON:0003124,2.99e-10,7;UBERON:0000992,5.68e-09,13;UBERON:0001136,1.59e-08,1;UBERON:0001343,1.59e-08,1;UBERON:0004910,1.59e-08,1;UBERON:0005154,1.59e-08,1;UBERON:0005295,1.59e-08,1;UBERON:0004813,1.59e-08,1;UBERON:0005297,1.59e-08,1;UBERON:0005294,1.59e-08,1;UBERON:0010141,1.59e-08,1;UBERON:0005891,1.59e-08,1;UBERON:0000991,2.43e-08,21;UBERON:0009196,2.43e-08,21;UBERON:0009117,2.43e-08,21;UBERON:0005564,2.43e-08,21;UBERON:0001013,3.07e-08,14;UBERON:0004176,5.95e-08,22;UBERON:0002119,6.03e-08,4|phase1_expression=0,0.642301571672949,0.281908808191942,0,0,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0.975865597581014,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.01392563272577,0,1.94653948121054,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0,0.151357427644931,2.30470369792,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.612975591598039,0.150238058906597,0,0.538168907066586,0,0.211931901159562,0.900273288253207,0.206105058476878,0,0.18611685633159,0,0.584622030967192,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0.958499421966331,1.14861935834114,0,0,1.64381058040307,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,0.623912584592421,3.7470087647404,0,0.585707074963566,0.300946099727719,0,0,0,0.368738337083406,0,0.783204629850962,1.02943027143257,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0.511707249066704,1.12597744800525,0,0.154209693802656,0.710246901252508,0.164254312027618,0,0.929683027679674,0,0,0,0.459257792658427,0.910455840033585,0.524497659837696,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,1.6068392984416,0.096670718292122,0.616194468458578,0.460511024178389,0.137836572484531,0,0.435050081742686,0.255679882248303,0.534192213880424,0,0,0,0,0.929691098594572,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0.823611089208164,0.353437207037059,0,0,0.842516912477962,0,0.487426979262569,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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{{FFCP
|DHSsupport=not supported
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr10:127824191..127824203,-
|id=chr10:127824191..127824203,-
|ontology_enrichment_celltype=CL:0000055!3.63e-13!180;CL:0000048!4.99e-10!430;CL:0000723!1.70e-09!436;CL:0000034!8.13e-09!444;CL:0000057!5.12e-08!75;CL:0002320!2.85e-07!365
|ontology_enrichment_celltype_v019=CL:0002570;2.50e-14;8!CL:0000134;1.43e-13;55!CL:0000048;1.10e-12;58!CL:0000723;3.38e-11;61!CL:0002541;5.30e-11;3!CL:0000135;1.24e-10;3!CL:0000388;1.24e-10;3!CL:0000034;4.02e-10;69!CL:0000511;2.12e-08;1!CL:0002625;2.12e-08;1!CL:0000216;2.12e-08;1
|ontology_enrichment_celltype_v019_2=CL:0002570,2.69e-14,8;CL:0002541,5.59e-11,3;CL:0000135,8.26e-11,3;CL:0000388,8.26e-11,3;CL:0000511,1.59e-08,1;CL:0002625,1.59e-08,1;CL:0000216,1.59e-08,1
|ontology_enrichment_development_v019=UBERON:0003124;5.80e-09;1
|ontology_enrichment_disease=DOID:2394!6.75e-11!14
|ontology_enrichment_disease_v019=DOID:2394;1.37e-12;14
|ontology_enrichment_disease_v019_2=DOID:2394,1.46e-12,14
|ontology_enrichment_uberon=UBERON:0002118!8.66e-08!5;UBERON:0004532!8.66e-08!5;UBERON:0002384!3.02e-07!375;UBERON:0001013!8.08e-07!14
|ontology_enrichment_uberon_v019=UBERON:0003124;5.30e-11;3!UBERON:0000920;5.30e-11;3!UBERON:0007846;1.24e-10;3!UBERON:0000043;1.24e-10;3!UBERON:0007845;1.24e-10;3!UBERON:0000992;5.37e-09;13!UBERON:0001136;2.12e-08;1!UBERON:0001343;2.12e-08;1!UBERON:0004910;2.12e-08;1!UBERON:0004813;2.12e-08;1!UBERON:0000991;2.49e-08;21!UBERON:0001013;2.95e-08;14!UBERON:0002119;5.42e-08;4
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.59e-11,3;UBERON:0007846,8.26e-11,3;UBERON:0000043,8.26e-11,3;UBERON:0007845,8.26e-11,3;UBERON:0003124,2.99e-10,7;UBERON:0000992,5.68e-09,13;UBERON:0001136,1.59e-08,1;UBERON:0001343,1.59e-08,1;UBERON:0004910,1.59e-08,1;UBERON:0005154,1.59e-08,1;UBERON:0005295,1.59e-08,1;UBERON:0004813,1.59e-08,1;UBERON:0005297,1.59e-08,1;UBERON:0005294,1.59e-08,1;UBERON:0010141,1.59e-08,1;UBERON:0005891,1.59e-08,1;UBERON:0000991,2.43e-08,21;UBERON:0009196,2.43e-08,21;UBERON:0009117,2.43e-08,21;UBERON:0005564,2.43e-08,21;UBERON:0001013,3.07e-08,14;UBERON:0004176,5.95e-08,22;UBERON:0002119,6.03e-08,4
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|short_description=p@chr10:127824191..127824203,-
}}

Revision as of 05:32, 11 January 2014

Short description:p@chr10:127824191..127824203, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): No
Description: CAGE_peak_at_chr10:127824191..127824203, -
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data