FFCP PHASE1:Hg19::chr10:133795416..133795436,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=664 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1084 | |||
|TSSclassifier=strong | |||
|UniProt=Q12983,B4DHJ7 | |||
|association_with_transcript=0bp_to_ENST00000368636,ENST00000540159,NM_004052,uc001lkv.1,uc010qut.1_5end | |||
|description=CAGE_peak_1_at_BNIP3_5end | |||
|id=chr10:133795416..133795436,- | |||
|ontology_enrichment_celltype=CL:0000055!1.01e-13!180;CL:0000359!3.17e-09!32;CL:0000192!2.69e-08!42;CL:0000514!2.69e-08!42;CL:0000680!2.88e-07!57;CL:0000056!2.88e-07!57;CL:0000355!2.88e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.47e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.04e-09,32;CL:0000192,4.94e-08,43;CL:0000514,4.94e-08,43;CL:0000680,4.40e-07,58;CL:0000056,4.40e-07,58;CL:0000355,4.40e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.14e-12!365;UBERON:0004872!7.43e-10!84;UBERON:0001637!3.48e-09!42;UBERON:0003509!3.48e-09!42;UBERON:0004572!3.48e-09!42;UBERON:0000477!5.66e-09!286;UBERON:0002100!5.76e-09!216;UBERON:0005256!8.20e-09!143;UBERON:0000119!9.18e-09!312;UBERON:0000483!9.20e-09!309;UBERON:0000914!1.06e-08!83;UBERON:0002329!1.06e-08!83;UBERON:0003077!1.06e-08!83;UBERON:0003059!1.06e-08!83;UBERON:0007282!1.06e-08!83;UBERON:0009618!1.06e-08!83;UBERON:0007285!1.06e-08!83;UBERON:0001981!1.78e-08!60;UBERON:0007500!1.78e-08!60;UBERON:0004537!1.78e-08!60;UBERON:0006965!1.78e-08!60;UBERON:0004111!2.23e-08!241;UBERON:0000490!2.62e-08!138;UBERON:0003914!8.17e-08!118;UBERON:0000486!8.31e-08!82;UBERON:0001134!9.17e-08!61;UBERON:0002036!9.17e-08!61;UBERON:0003082!9.17e-08!61;UBERON:0000481!1.92e-07!347;UBERON:0000055!2.14e-07!69;UBERON:0004290!2.76e-07!70;UBERON:0002385!3.25e-07!63;UBERON:0001015!3.25e-07!63;UBERON:0000383!3.25e-07!63;UBERON:0002049!3.53e-07!79;UBERON:0007798!3.53e-07!79;UBERON:0000025!5.58e-07!194 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.83e-09,83;UBERON:0001637,3.34e-09,42;UBERON:0003509,3.34e-09,42;UBERON:0004572,3.34e-09,42;UBERON:0000483,5.59e-09,306;UBERON:0000119,5.60e-09,309;UBERON:0004111,1.42e-08,240;UBERON:0000490,3.50e-08,148;UBERON:0007500,4.56e-08,59;UBERON:0001981,4.56e-08,59;UBERON:0004537,4.56e-08,59;UBERON:0006965,4.56e-08,59;UBERON:0003914,4.81e-08,117;UBERON:0000486,1.33e-07,83;UBERON:0001134,1.41e-07,62;UBERON:0002036,1.41e-07,62;UBERON:0003082,1.41e-07,62;UBERON:0002100,1.45e-07,199;UBERON:0007524,2.50e-07,73;UBERON:0003104,3.00e-07,160;UBERON:0009142,3.00e-07,160;UBERON:0005256,3.21e-07,122;UBERON:0002329,3.97e-07,71;UBERON:0003059,3.97e-07,71;UBERON:0007282,3.97e-07,71;UBERON:0004290,3.97e-07,71;UBERON:0009618,3.97e-07,71;UBERON:0003077,4.34e-07,72;UBERON:0007285,4.34e-07,72;UBERON:0002385,4.81e-07,64;UBERON:0001015,4.81e-07,64;UBERON:0000383,4.81e-07,64;UBERON:0000025,4.81e-07,192;UBERON:0000055,5.32e-07,68;UBERON:0002049,8.93e-07,78;UBERON:0007798,8.93e-07,78 | |||
|phase1_expression=41.786027232228,81.3581990785736,24.667020716795,13.009528785907,15.6436383049551,33.148863915814,37.9949817252466,22.7419154433659,19.8501077431877,40.0546316497459,18.8406315352555,4.15038607047327,2.63766978228454,16.4609249436862,9.94192127183747,2.6893005858071,3.61616716814386,7.30310090387373,9.27072317701963,1.23121058076788,4.48801520737357,7.20945859399602,4.29353980696585,5.2012281527696,10.168953807179,12.3025583254202,7.22485187159523,8.57947516319104,1.18009283054671,1.15148819429164,0.928896739896456,11.9524759182261,15.662707776469,5.17655614233503,0,0,0.880801318004542,2.21598163412751,0.601633342410425,0.217010870715852,1.11957737119962,1.94336199611388,0.515151135268373,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0.575384784644301,0,0.236482229888585,0.689491361473237,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,1.81619850790011,0,0.316462387440884,0.633765858935825,0,0.419317291016752,0,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0,3.55803701545422,1.70692089026603,1.20118796110804,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,0,0,0,0,0.790152254325231,1.180258620683,1.57204305099666,1.23360899399706,2.34061093546949,3.2592226663359,3.31413464014313,0,2.78526142212934,1.47302953737419,1.32920336750173,0,1.28091319725675,0.780356085359269,0.657751618414705,1.10540007114339,1.73881851441031,5.19002971067211,1.60524496853828,2.09071047609954,3.17266159553185,1.14966148080576,1.03088233644789,0.506039384039006,2.22995790026868,3.25541726928209,4.75226022224187,1.20460095262218,0.383959833463255,1.24930726552346,0.947109008176067,0,1.61285394579786,0.534880391567015,3.47578569318718,12.1903433156981,13.4140171940727,90.9102814707501,13.0118094858444,20.5548543360715,29.548689868008,29.4255800408907,73.481865415698,2.07976597760949,3.1042115644759,1.84453049955565,16.5033635127118,8.37879163072847,11.1235332835329,1.62273696827342,3.48259474598534,3.58986493400936,0,0,0,20.870052773504,8.60234595106124,20.4812895948481,11.3061588384802,13.8434813949269,9.35401342596229,21.9444714863651,22.2238412885623,31.6631973791172,12.3846626722928,4.83395180530976,21.2876189601184,12.2031028774085,3.30896772311282,6.48113558305408,7.14397826272638,7.63399866928977,9.1215299191491,12.2653309972707,13.2897192339538,23.6330249670225,0,3.87780264148325,25.7295490764095,93.4307269187199,17.9815326563703,27.1438820667099,4.01571269048339,18.0880874921162,35.3226888089654,26.6872489324262,25.9000925838018,21.4735614425839,5.38842688278752,4.41347138406339,3.02714855289863,17.2852777344,8.66989297785048,9.98912245857026,22.818872861778,17.4854956245607,3.17073146338165,8.57926605151097,7.44389275521917,31.0314340307438,16.7054671544004,42.6735476255911,9.50402285825643,23.2430913521843,0.910161361938026,6.46756327634615,13.8035613442334,34.2824744449182,30.4770527032601,9.65750765937843,8.88814607817157,29.5968976045996,40.7221537544475,6.99619579186562,33.7420674333337,51.0755881794544,6.00182192168805,11.747988333182,15.973713482829,30.7092812947123,21.7721468591233,34.3952628219031,12.1168211637175,29.1798178696089,1.77810662500693,16.6854508482809,20.7549322348939,36.1164061621339,23.7710849390855,23.1834202502209,31.8353100881794,16.3444766213658,14.4457447470419,44.0375043475475,23.7383815985198,35.324919122588,34.307871753128,4.69348596989448,12.8648187638577,12.4321429217232,5.10804720835177,6.49691533502627,17.7460200059766,16.3527149375759,21.4499816596299,19.5220331736337,20.4806677446862,16.8462139568879,16.8539135200206,15.1090528146516,18.8526106903731,2.95262181849859,36.4628611888959,3.7041661019826,1.47008711385542,17.7457048750563,10.8110993834539,16.5421173870793,0,3.93563003337963,38.9458929377653,10.3165268284108,3.37205259772859,17.4920411996238,9.0736676255359,17.5936484867575,21.8386304908711,27.4229549848019,21.5630553253643,7.63156512532841,17.4683401790899,3.70388410061289,6.46864117597634,12.6432703673484,7.72637545885385,7.14029317653452,0,5.49935300468294,22.4961201568265,13.4385702559088,18.5725377387526,12.0904005648845,11.6253575405585,58.2741672331121,0,0,1.65862492432618,0.288239906833923,1.76739406796932,6.09579785204823,13.751583320098,3.51652341630141,15.3965201420435,13.1619190660254,2.40274446275134,2.85826432630578,2.91540819297938,10.0270815831654,21.6347943171803,7.23921608243556,25.0359512096318,6.762422020448,5.31876233169741,5.2003718455683,7.71622122786426,8.5109479213967,7.72624319146688,160.850242865416,4.88359444852299,8.23240336780769,4.88604276440603,172.365095140135,10.2953743481346,22.0050745253498,12.2014684204041,14.1961647478521,9.72990245129524,3.01354254859276,4.21667878966063,14.1378664740034,18.3779097334582,9.98458335285029,40.6835471735898,20.9585849001391,37.6028022803781,0,0.788123040807709,1.2937654491571,1.41177339907723,3.04913549066956,5.20559415430487,6.95959931499926,2.17771144934653,8.29320377149112,0.749007023947182,0,0,24.7836813272663,10.0034104211935,22.5149969670781,35.7709881832988,27.6564932635601,22.7091477648866,26.5911012033459,46.044753258341,13.6444502433591,15.5209606938757,31.882828729701,68.5853306975136,11.0342190374465,7.04884166865866,6.17658162859541,0.413536052245775,0.647142602455851,0.640365346820666,25.7658435729321,11.6504807657348,10.5836602665388,37.4642789806353,32.8408622836454,32.5565709542365,39.0824405229888,26.0970697024019,25.41491954069,50.4621425912969,4.78050050788232,16.5132404541208,4.59912073677331,3.63478100428535,8.36714724911707,4.3509401852984,115.291220424389,19.2449266876023,17.222167224691,20.3942108167523,14.0303124006584,5.86559496779635,30.7291195046615,5.49044838423799,8.76835347919564,34.1987277612917,1.13733384070897,4.76262374774244,3.02282282542995,1.54227252690289,5.96082162596476,4.01351819083883,7.64628819135115,7.47968408035852,23.5068492458287,0.657779629937804,0.522870902049801,14.6176571316342,1.31205858279882,1.30151357865721,52.7569979636338,14.0101281172065,7.50836449277351,9.76251414593493,12.3511446746939,188.000197917667,4.25351160485337,4.1593126620954,4.29810289233163,5.65129947186575,4.72649077420404,5.80066775656914,7.32948995778468,4.09547363974992,33.3875529029176,65.152432836771,16.7172653367905,56.648357279108,167.344397747023,50.9996001865637,80.159286068469,92.7181076330027,32.4706678493383,108.741624009384,51.1494844726819,48.948711265761,16.0028098824657,10.440521015718,15.4410457078298,10.2359116524534,5.99114583247489,34.0477475280752,38.4624833697623,10.4326025398323,6.86342574340137,11.7812402345686,35.9884817200503,117.297637668026,27.3817996555338,8.28977356452303,48.011557457363,13.7345190783782,11.1929927354548,13.0092997397416,21.4715421578461,124.608567641424,55.7288739202625,56.1217133124816,15.0481638909339,6.55894752046633,100.237726219576,95.1158139166233,41.972644777304,4.01551786171344,13.3618695777845,102.364591775119,28.7356461897184,19.8441177179804,6.25660296623814,10.62524886544,11.5478457680844,14.6257611342778,36.1963228789325,9.80018863751903,49.0489202047019,56.8267091926023,6.73885902670502,35.0309821293974,15.1617444136593,0.507447609232169,0.764637207142375,1.13929437434833,0.476463550915578,1.23408681925858,0,0.540031437238115,0.79312517629427,6.51626833877586,2.88743956579008,2.69544237579135,2.78704762688578,9.81030648239825,0,2.07254154547469,3.79200805722352,1.34053759092657,14.8171507906718,58.1073273091454,2.24637742490767,3.42352018549788,2.97691801968744,5.01268954180134,2.53937666702405,0.321176150207399,0.80719882876419,3.40676990152261,5.15258017133647,5.53033375755224,5.14455048152557,4.67177596793344,2.14926904942244,5.84652965180009,1.23087398947712,1.6227340708559,5.99529542396076,32.4270111702054,6.36277837387947,8.93699893558553,79.2484207024323,0,0,21.4870036263921,2.37571744666111,15.9723565091601,12.9239194209619,13.0822557261777,9.12731381187828,9.88823245360557,10.9785212226557,5.77819165928102,1.65770349318689,131.760827127786,10.5336742977219,30.7712013652674,141.211972798461,0,0.179021174675609,3.5810065915881,13.1195729497122,2.3948309234694,11.1136990144637,14.5399911914283,18.3680834360466,5.98841394003583,11.198393726665,41.8058799981815,15.2249910841307,20.3690272431044,5.33932665614809,6.38246740773428,24.476779500144,90.3974301488088,42.5381237586566,3.54296554325536,13.0244153715441,3.05163472634166,15.259937870509,19.8016904698877,11.6274260491605,6.31843088410143,1.39423744278603,6.69467248983034,30.5364709669963,54.8742092443583,18.7593476816424,12.929037258719,29.0291055356047,6.3202339447285,5.33034776018635,7.15353087370155,33.9077353813254,12.798299506312,64.7459545971309,91.9533285950198,72.6667471605399,21.0626643323845,10.9666239496461,4.64195741961659,45.8684190927205,1.97894300007517,11.4685979063308,2.98578579323551,5.04208117669033,70.2684666673669,2.07564790076435,1.23563938946503,1.77517314159274,15.434859452575,8.82835412028668,50.6011202766733,0,0,0,7.10251925128903,13.308978765353,1.83643656978294,3.47526187956684,5.11099626009275,2.79958116772567,4.6525771089503,1.65495977937749,2.82539626566503,5.97362148864794,2.27687636823834,2.77349346026277,22.9098854602373,6.85946781900644,16.3671308371157,3.84398670132466,0,7.8372628344159,6.43185990358433,8.78635390469339,9.9898686983072,20.4754213924281,153.666903730762,17.5413663547841,10.1344451968525,17.4737796838225,3.71547627196126,0,2.13452994739353,0,5.76361668616424,0,61.6026042324453,1.58460277786965,29.8206085357038,3.53541051925193,12.9108995769933,13.7029728669156,15.5037290807209,29.1840095800534,10.8075651967762,8.76194424908756,0,26.6454573680373,15.5103539024796,5.58564802544508,25.8951279133203,15.0753335161131,51.9165401297377,44.6395090062034,114.263786210239,49.1111183877969,91.1558705362281,29.1239873818635,38.4461929659251,30.9059468929374,34.4432109094885,15.2562596347861,7.78994655005217,7.95229689809303,14.8461712661617,19.2903778158023,17.1924295746542,8.3088067605837,2.69968669861801,4.6428117273477,13.6686502480555,9.39217125277945,15.9975585817372,20.3523801963793,11.9328380266929,22.0523427379399,2.68681276247223,17.1526878329608,165.522992591358,10.6792785814995,24.9779816806708,22.469758771233,8.49127136284464,1.19730191562487,5.99275401470174,86.2163390234234,14.9571960806566,54.3708786945686,43.727273341033,8.92052398894699,15.4712144038947,4.61934462287689,9.16259529011673,8.75656783055096,5.34494637338864,3.31391244277756,2.48083010905975,0,10.5959560591379,0,26.1128545617348,23.5648500381338,26.9584107551846,23.6068294111059,22.9298980525342,8.86068179966986,9.88412745705902,16.525202853258,10.8947747181114,11.98033756598,15.71038994417,2.49027542885215,11.3732171245517,3.63957882099955,3.42558400253961,3.99951893486892,16.3917217032409,1.59413131471908,12.3881486396105,8.64739246434731,7.76728206103659,7.19731420045339,10.3142839718556,17.7962244319307,11.2131633514493,6.65416064558252,3.88593001456951,2.95710299979268,16.4075670178613,27.4379898419799,27.6368063239742,35.6647338743136,36.9519983235613,66.2616228500902,23.2899293945689,116.90720013582,13.4267341957538,28.3683908355993,16.1115835563733,34.802531990887,75.638218852737,32.0022211730523,16.1395981435913,22.2254662585507,20.1895837165842,9.24575185955056,0.643324774124777,0.782982875895635,0.680117776536817,8.56633154998186,5.87368090815522,3.93995450379272,0.926404341482917,7.45565768567604,11.3081053405364,1.92914038270915,3.7167336943676,144.520216483602,3.45430341731199,15.8007177212239,13.1345514344144,0.584580926518165,2.25870228532717,0.490696182767533,35.709473524259,267.400924724047,0,1.59989916683944,8.10857145675471,1.72214979660816,13.0528669320372,9.38940346284388,5.17554178561945,13.6856997207254,2.17420431216208,27.4953269061539,5.34704202310048,13.1051565830417,16.2943228755864,10.8413209251858,34.5780782282616,9.49696360554514,165.680266690431,30.2829100804813,14.4102734691385,27.1560476641827,17.1497467317792,12.9743034694848,2.8339315265117,13.728511878915,33.6390837354838,2.52071696221718,17.2201558635903,10.1729656748066,11.4215536207324,3.04257927353179,13.5665181849901,1.46742878817343,1.73288499225507,34.324388592045,10.3553988909015,10.14472732793,15.5685379682963,62.5285712980912,104.722877505234,17.2858418357739,7.86105204048464,1.33070477595341,19.3832867854793,7.81078098613847,18.3951248886054,17.6295952339061,2.7348740450911,26.3163728091447,4.46590060550365,17.2353819472428,9.96546935588843,0.535701835878287,3.69912094440706,4.24875922965642,7.96817669729542,18.4500929938289,14.1737804693608,58.991875246472,20.59482909198,16.3116478435866,19.1474022232028,17.685792900839,18.4458768198708,5.18481446722806,0,17.3500156896804,6.0459725541214,137.59248611147,6.7187951526057,32.0767631817435,12.7865567904938,2.78173235684127,45.6975477896244,8.08143040235844,3.0729325876911,6.22133695632683,3.8720462293825,5.20660803214488,6.81707238073262,8.04435395362765,2.2910686854405,16.7511448258733,3.82215575590973,3.02009665854039,0,0,91.934894880681,78.6397100518852,5.799072156691,13.1141968125968,13.1006099538779,0,2.85408217866165,16.2642358136102,63.7654997123489,7.69910502190035,3.47283711485751,16.8290861588047,13.6392015944842,5.14811475683202,8.48435569565853,12.7600503624714,10.9907168121022,16.906229103336,162.280394526865,3.853340637174,5.35000470180691,13.9917618294901,1.60698544745092,0.705789743431384,2.80844783412089,2.92134555298607,19.7253591863953,16.3407124792654,3.47097436825006,18.357702351547,2.18175345170189,3.1741610430924,5.57992527250127,6.00828317220844,5.62414530760926,59.9290517966625,93.9683918887782,11.022769587995,82.2029967720373,61.1927858058134,4.77853477581194,102.288676031289,5.53184496993148,3.21556956187414,16.5833887891756,14.3771864248034,5.5440835294255,8.80838396415839,3.10026767212829,9.31120714437869,16.9319112496726,11.965665756295,4.85081253499726,11.103554142745,41.7524627324043,3.16554649168561,8.03288700397975,20.9576024623988,0.814032686109745,8.9650970537281,30.8915651659104,0.808426818959282,49.2745979047254,1.1001729976458,47.1999566846257,8.65483806441166,4.6292972525936,34.3008286764459 | |||
|short_description=p1@BNIP3 | |||
}} |
Revision as of 05:38, 11 January 2014
Short description: | p1@BNIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BNIP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368636, ENST00000540159, NM_004052, uc001lkv.1, uc010qut.1_5end |
EntrezGene: | BNIP3 |
HGNC: | 1084 |
UniProt: | Q12983B4DHJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.04e-09 | 32 |
smooth muscle cell | 4.94e-08 | 43 |
smooth muscle myoblast | 4.94e-08 | 43 |
muscle precursor cell | 4.40e-07 | 58 |
myoblast | 4.40e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.40e-07 | 58 |