FFCP PHASE1:Hg19::chr11:6340965..6340985,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112464 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9400 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=306bp_to_ENST00000532354_5end | |||
|coexpression_cluster_id=C3180 | |||
|description=CAGE_peak_3_at_PRKCDBP_5end | |||
|id=chr11:6340965..6340985,- | |||
|ontology_enrichment_celltype=CL:0000055!3.65e-30!180;CL:0000222!1.17e-17!119;CL:0000183!4.47e-16!59;CL:0000057!1.74e-15!75;CL:0000680!5.28e-15!57;CL:0000056!5.28e-15!57;CL:0000355!5.28e-15!57;CL:0000187!3.06e-14!54;CL:0000220!3.17e-13!246;CL:0002321!4.67e-13!248;CL:0000548!5.07e-12!679;CL:0000004!5.07e-12!679;CL:0000255!5.07e-12!679;CL:0000192!6.60e-12!42;CL:0000514!6.60e-12!42;CL:0000393!1.05e-11!60;CL:0000211!1.05e-11!60;CL:0000012!2.28e-11!682;CL:0000144!9.18e-11!625;CL:0002371!2.34e-10!591;CL:0000136!2.18e-07!15;CL:0000359!2.68e-07!32;CL:0000325!6.28e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000187;1.18e-09;55!CL:0000192;1.10e-08;43!CL:0000136;6.32e-08;13!CL:0000359;2.97e-07;32!CL:0000393;5.37e-07;61!CL:0000211;5.37e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.18e-15,58;CL:0000056,1.18e-15,58;CL:0000355,1.18e-15,58;CL:0000057,4.37e-15,76;CL:0000222,6.64e-15,121;CL:0000187,9.45e-15,55;CL:0000192,9.49e-12,43;CL:0000514,9.49e-12,43;CL:0000393,1.18e-11,61;CL:0000211,1.18e-11,61;CL:0000136,1.54e-08,15;CL:0002321,2.27e-08,250;CL:0000359,4.33e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000355;5.11e-09;58!CL:0000514;1.10e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.45e-16!83;UBERON:0002329!3.45e-16!83;UBERON:0003077!3.45e-16!83;UBERON:0003059!3.45e-16!83;UBERON:0007282!3.45e-16!83;UBERON:0009618!3.45e-16!83;UBERON:0007285!3.45e-16!83;UBERON:0004290!1.37e-15!70;UBERON:0000486!1.06e-14!82;UBERON:0005256!6.20e-14!143;UBERON:0001134!1.71e-13!61;UBERON:0002036!1.71e-13!61;UBERON:0003082!1.71e-13!61;UBERON:0002385!2.18e-13!63;UBERON:0001015!2.18e-13!63;UBERON:0000383!2.18e-13!63;UBERON:0002049!8.17e-12!79;UBERON:0007798!8.17e-12!79;UBERON:0004872!1.05e-11!84;UBERON:0004535!6.54e-11!110;UBERON:0001009!7.85e-11!113;UBERON:0002100!8.29e-11!216;UBERON:0003104!9.85e-11!238;UBERON:0009142!9.85e-11!238;UBERON:0003914!4.23e-09!118;UBERON:0000926!4.93e-09!448;UBERON:0004120!4.93e-09!448;UBERON:0006603!4.93e-09!448;UBERON:0000055!9.19e-09!69;UBERON:0001981!9.88e-09!60;UBERON:0007500!9.88e-09!60;UBERON:0004537!9.88e-09!60;UBERON:0006965!9.88e-09!60;UBERON:0000481!2.19e-08!347;UBERON:0000490!2.57e-08!138;UBERON:0001737!4.74e-08!9;UBERON:0001637!2.81e-07!42;UBERON:0003509!2.81e-07!42;UBERON:0004572!2.81e-07!42;UBERON:0003102!5.31e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.26e-09;9!UBERON:0001557;2.26e-09;9!UBERON:0002385;2.26e-07;31!UBERON:0001015;2.26e-07;31!UBERON:0000383;2.26e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.97e-17,78;UBERON:0002329,5.36e-16,71;UBERON:0003059,5.36e-16,71;UBERON:0007282,5.36e-16,71;UBERON:0004290,5.36e-16,71;UBERON:0009618,5.36e-16,71;UBERON:0007524,1.71e-15,73;UBERON:0003077,1.74e-15,72;UBERON:0007285,1.74e-15,72;UBERON:0001134,4.98e-14,62;UBERON:0002036,4.98e-14,62;UBERON:0003082,4.98e-14,62;UBERON:0002385,1.19e-13,64;UBERON:0001015,1.19e-13,64;UBERON:0000383,1.19e-13,64;UBERON:0005256,1.93e-13,122;UBERON:0000486,4.80e-13,83;UBERON:0003104,6.39e-12,160;UBERON:0009142,6.39e-12,160;UBERON:0001009,5.90e-10,112;UBERON:0004535,6.68e-10,109;UBERON:0004872,7.25e-10,83;UBERON:0001737,2.50e-09,9;UBERON:0002049,3.74e-09,78;UBERON:0007798,3.74e-09,78;UBERON:0000490,4.11e-09,148;UBERON:0000926,5.29e-09,315;UBERON:0004120,5.29e-09,315;UBERON:0006603,5.29e-09,315;UBERON:0002100,1.05e-08,199;UBERON:0007500,1.81e-07,59;UBERON:0001981,1.81e-07,59;UBERON:0004537,1.81e-07,59;UBERON:0006965,1.81e-07,59;UBERON:0003914,2.24e-07,117 | |||
|phase1_expression=2.36181893051724,6.63711624062048,3.52386010239928,6.00439790118782,6.70441641640932,3.48935409640147,22.796989035148,1.89515962028049,4.70134130759709,1.22866968250754,0,2.18441372130172,0.791300934685361,5.07442047136191,2.65117900582333,2.01697543935533,1.20538905604795,3.65155045193687,3.90346239032406,2.21617904538218,1.83600622119828,1.56727360739044,0,0.273748850145768,0.753255837568817,0,0,0,0,0,0.309632246632152,0.919421224478927,1.50602959389125,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,2.04580098949649,2.1686349143074,2.50668955317945,1.59331170856906,7.15757352345989,4.37971383272372,2.3633704291017,3.32594096193846,2.54720878510066,0.523916301990851,2.18577172975525,0.741568885568859,0,0,0.132957960518865,0,0,0,0.39752481473341,1.72046919021225,0.694281003215189,0.56530794192401,1.67799774483962,2.47606237746061,0.417989933073621,0.775250277507987,0.71153252537342,0.33472061276467,1.20848795132744,0.760272105718513,0.24406205754817,1.47065232138347,0,1.16089646769304,1.12264686313085,1.12611480483322,4.5994991239765,1.89853131913626,2.38162267109529,0,0,0.872188104285069,3.97577561356255,4.05217637326655,3.57504788195691,4.58938593198102,3.19201543978521,3.92474320099615,3.20246987189115,2.71334303258876,1.8672662123986,1.34710672069688,1.30769522490767,1.21085942115945,1.15235184896,3.51482147750695,0.936480230490962,2.2818872861778,1.49448680551801,3.05329696473789,1.78060238804945,3.79217178096071,1.42907919878425,5.77321291365309,2.58314452939414,0,2.47266929278557,3.64064544775211,6.46756327634615,2.02003336744879,3.75355559615892,0.831192346452549,0,1.5324389789951,1.65261864797256,0.567160915800105,1.07633781413317,2.98980344345994,1.27159140695737,1.20036438433761,1.64884046781502,0.515281080091258,0.930584281657949,0.843881661206331,2.53336213419116,3.02920529092937,2.66944706062668,1.2931684545505,2.4850671476163,1.30977727695932,2.37384829234683,1.54608682530637,0.545492241181669,0.573609190778008,0.243947412259191,0.132529768321485,0.348581828608555,0.414644220061482,0.252320850875628,0.36497735907583,4.69348596989448,1.92972281457866,1.38134921352481,4.17931135228781,9.38443326170461,15.8531112053391,16.3527149375759,12.5325735539411,18.5293874190422,13.7264049778216,15.1853196231102,21.9775032301068,17.8561533264065,13.0814033361773,1.4763109092493,2.80483547606892,6.173610169971,4.41026134156626,5.07020139287323,0,0,0,0,1.20097467208968,2.30475599358114,5.62008766288098,2.11110842064425,0.0925884451585296,3.25808305310325,5.19967392639789,4.3299402607582,1.85488647960123,0.70445216541493,0.721832238805369,0.925971025153221,0.570762456703795,0,0,0.492434012174795,0,0.148631162288728,1.87467667973554,0.671928512795438,1.13420077793909,1.25381931783988,2.61570544662566,0.766765358330422,0,0,0,0.144119953416961,0,2.41291998310242,2.67391897890794,2.34434894420094,5.13217338068116,1.7480673759565,1.8020583470635,1.42913216315289,2.13049060256185,0,1.68678057388185,2.19761916788222,7.15312891703765,0,2.12750493267896,10.4007436911366,2.82928111688356,2.83698264046557,2.66422179016099,1.71573592389777,0,4.11620168390384,0.65147236858747,0.355391948742546,2.37585561880029,2.1100756394171,1.74306691720059,0.699810938274399,0,0,0,2.63587341040741,8.04033550838797,2.85273810081437,2.31650090668127,2.05476322550383,2.32779252211864,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.736148950314839,6.00204625271613,1.08506009479894,1.87173775377726,3.56857977594324,4.73107245101804,4.21709093973768,1.50473049863859,9.09630016223939,6.2083842775503,1.99267679560631,2.39679919104214,3.73599542212756,4.50342662164303,3.43143423810856,0,0,0,0.909382714338778,8.32177197552485,2.11673205330776,5.21026396419431,3.6830873589135,3.36792113319688,5.25370511948374,2.04682899626681,1.93024705372329,4.45254199334973,2.31314540703983,2.30830242907065,1.64254312027618,1.03850885836724,2.90525946149898,0,0.200506470303285,0,2.41110341145674,2.00300284807389,1.70461739447251,0.902399225814824,0.539107359730903,2.35304930753057,1.46139224653261,0.211103257785751,3.4120015221269,2.38131187387122,2.15915916102139,1.54227252690289,1.62567862526312,4.01351819083883,0.764628819135115,0.831076008928724,2.23874754722178,0,0,0,0.656029291399411,0,0.824328093181778,0.183138929636687,0.165018999841176,0.574265537996172,0.650060246036521,3.21367859688319,1.25671933779759,3.23502095940753,3.99109554287937,1.7918754422989,2.36324538710202,6.0907011443976,1.96021243057032,2.49289699810865,0.165284915360978,0.768760269460425,0.382838137483752,0.2023155617111,5.11330104227014,1.25924938732256,2.0911118104818,0.308033580176089,1.06461206063404,5.21959795245044,1.8532421910392,1.71749864090389,7.44316738719335,1.58189712359363,2.66882271493355,4.86205803491534,0.855877976067841,2.22742273548156,3.13979456079692,4.856556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| |||
|short_description=p3@PRKCDBP | |||
}} |
Revision as of 06:21, 11 January 2014
Short description: | p3@PRKCDBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRKCDBP_5end |
Coexpression cluster: | C3180_Adipocyte_Mesenchymal_Hep2_cord_mesenchymal_Smooth_Fibroblast |
Association with transcript: | 306bp_to_ENST00000532354_5end |
EntrezGene: | PRKCDBP |
HGNC: | 9400 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.18e-15 | 58 |
myoblast | 1.18e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.18e-15 | 58 |
fibroblast | 4.37e-15 | 76 |
mesodermal cell | 6.64e-15 | 121 |
muscle cell | 9.45e-15 | 55 |
smooth muscle cell | 9.49e-12 | 43 |
smooth muscle myoblast | 9.49e-12 | 43 |
electrically responsive cell | 1.18e-11 | 61 |
electrically active cell | 1.18e-11 | 61 |
fat cell | 1.54e-08 | 15 |
embryonic cell | 2.27e-08 | 250 |
vascular associated smooth muscle cell | 4.33e-07 | 32 |